Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08760 and IAI46_08765 are separated by 226 nucleotides IAI46_08765 and IAI46_08770 are separated by 255 nucleotides
IAI46_08760: IAI46_08760 - asparagine--tRNA ligase, at 1,876,596 to 1,877,996
_08760
IAI46_08765: IAI46_08765 - nicotinate phosphoribosyltransferase, at 1,878,223 to 1,879,428
_08765
IAI46_08770: IAI46_08770 - GGDEF domain-containing protein, at 1,879,684 to 1,881,384
_08770
Position (kb)
1878
1879
1880 Strain fitness (log2 ratio)
-1
0
1
2 at 1878.034 kb on - strand at 1878.061 kb on - strand at 1878.157 kb on - strand at 1878.159 kb on - strand at 1878.224 kb on + strand at 1878.248 kb on - strand at 1878.324 kb on + strand at 1878.408 kb on + strand, within IAI46_08765 at 1878.408 kb on + strand, within IAI46_08765 at 1878.408 kb on + strand, within IAI46_08765 at 1878.409 kb on - strand, within IAI46_08765 at 1878.597 kb on - strand, within IAI46_08765 at 1878.597 kb on - strand, within IAI46_08765 at 1878.778 kb on - strand, within IAI46_08765 at 1878.815 kb on + strand, within IAI46_08765 at 1878.816 kb on - strand, within IAI46_08765 at 1878.816 kb on - strand, within IAI46_08765 at 1879.151 kb on + strand, within IAI46_08765 at 1879.280 kb on + strand, within IAI46_08765 at 1879.332 kb on + strand at 1879.341 kb on - strand at 1879.365 kb on + strand at 1879.375 kb on - strand at 1879.375 kb on - strand at 1879.375 kb on - strand at 1879.376 kb on + strand at 1879.376 kb on + strand at 1879.376 kb on + strand at 1879.376 kb on + strand at 1879.377 kb on - strand at 1879.377 kb on - strand at 1879.419 kb on - strand at 1879.419 kb on - strand at 1879.428 kb on + strand at 1879.428 kb on + strand at 1879.612 kb on + strand at 1879.613 kb on - strand at 1879.621 kb on - strand at 1879.621 kb on - strand at 1879.745 kb on + strand at 1879.873 kb on - strand, within IAI46_08770 at 1879.955 kb on + strand, within IAI46_08770 at 1880.029 kb on + strand, within IAI46_08770 at 1880.042 kb on + strand, within IAI46_08770 at 1880.042 kb on + strand, within IAI46_08770 at 1880.043 kb on - strand, within IAI46_08770 at 1880.150 kb on + strand, within IAI46_08770 at 1880.151 kb on - strand, within IAI46_08770 at 1880.154 kb on + strand, within IAI46_08770 at 1880.154 kb on + strand, within IAI46_08770 at 1880.155 kb on - strand, within IAI46_08770 at 1880.155 kb on - strand, within IAI46_08770 at 1880.174 kb on + strand, within IAI46_08770 at 1880.175 kb on - strand, within IAI46_08770 at 1880.196 kb on + strand, within IAI46_08770 at 1880.244 kb on - strand, within IAI46_08770 at 1880.250 kb on + strand, within IAI46_08770 at 1880.250 kb on + strand, within IAI46_08770 at 1880.251 kb on - strand, within IAI46_08770 at 1880.317 kb on - strand, within IAI46_08770 at 1880.350 kb on - strand, within IAI46_08770 at 1880.391 kb on - strand, within IAI46_08770 at 1880.391 kb on - strand, within IAI46_08770
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,878,034 - +1.1 1,878,061 - +0.1 1,878,157 - +0.8 1,878,159 - -0.4 1,878,224 + +0.1 1,878,248 - +0.1 1,878,324 + +0.7 1,878,408 + IAI46_08765 0.15 -0.1 1,878,408 + IAI46_08765 0.15 -0.4 1,878,408 + IAI46_08765 0.15 +0.6 1,878,409 - IAI46_08765 0.15 +0.4 1,878,597 - IAI46_08765 0.31 +0.2 1,878,597 - IAI46_08765 0.31 +0.1 1,878,778 - IAI46_08765 0.46 -0.5 1,878,815 + IAI46_08765 0.49 -0.1 1,878,816 - IAI46_08765 0.49 -0.2 1,878,816 - IAI46_08765 0.49 +0.8 1,879,151 + IAI46_08765 0.77 +0.0 1,879,280 + IAI46_08765 0.88 +0.2 1,879,332 + -0.1 1,879,341 - -1.6 1,879,365 + +0.7 1,879,375 - +1.3 1,879,375 - -0.4 1,879,375 - +1.4 1,879,376 + +0.1 1,879,376 + -0.7 1,879,376 + -0.6 1,879,376 + +1.6 1,879,377 - +1.1 1,879,377 - -0.4 1,879,419 - +0.3 1,879,419 - +0.4 1,879,428 + -1.4 1,879,428 + -0.6 1,879,612 + +0.7 1,879,613 - +0.6 1,879,621 - +0.4 1,879,621 - +2.5 1,879,745 + +0.5 1,879,873 - IAI46_08770 0.11 -0.1 1,879,955 + IAI46_08770 0.16 +0.9 1,880,029 + IAI46_08770 0.20 -0.4 1,880,042 + IAI46_08770 0.21 -0.5 1,880,042 + IAI46_08770 0.21 -0.4 1,880,043 - IAI46_08770 0.21 +0.5 1,880,150 + IAI46_08770 0.27 -0.9 1,880,151 - IAI46_08770 0.27 +0.5 1,880,154 + IAI46_08770 0.28 +0.3 1,880,154 + IAI46_08770 0.28 +0.2 1,880,155 - IAI46_08770 0.28 +0.7 1,880,155 - IAI46_08770 0.28 +0.3 1,880,174 + IAI46_08770 0.29 +0.3 1,880,175 - IAI46_08770 0.29 -0.8 1,880,196 + IAI46_08770 0.30 +0.4 1,880,244 - IAI46_08770 0.33 -1.2 1,880,250 + IAI46_08770 0.33 -0.0 1,880,250 + IAI46_08770 0.33 +1.1 1,880,251 - IAI46_08770 0.33 -0.1 1,880,317 - IAI46_08770 0.37 +0.3 1,880,350 - IAI46_08770 0.39 -0.4 1,880,391 - IAI46_08770 0.42 +0.7 1,880,391 - IAI46_08770 0.42 +1.1
Or see this region's nucleotide sequence