Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08730 and IAI46_08735 are separated by 222 nucleotides IAI46_08735 and IAI46_08740 are separated by 181 nucleotides IAI46_08740 and IAI46_08745 are separated by 66 nucleotides
IAI46_08730: IAI46_08730 - chromosome partition protein MukB, at 1,865,717 to 1,870,168
_08730
IAI46_08735: IAI46_08735 - L,D-transpeptidase, at 1,870,391 to 1,872,232
_08735
IAI46_08740: IAI46_08740 - YcbK family protein, at 1,872,414 to 1,872,962
_08740
IAI46_08745: IAI46_08745 - MBL fold metallo-hydrolase, at 1,873,029 to 1,873,676
_08745
Position (kb)
1870
1871
1872
1873 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1870.188 kb on + strand at 1870.189 kb on - strand at 1870.199 kb on + strand at 1870.240 kb on + strand at 1870.241 kb on - strand at 1870.241 kb on - strand at 1870.278 kb on - strand at 1870.286 kb on - strand at 1870.291 kb on + strand at 1870.291 kb on + strand at 1870.298 kb on + strand at 1870.345 kb on + strand at 1870.346 kb on - strand at 1870.361 kb on + strand at 1870.376 kb on + strand at 1870.377 kb on - strand at 1870.399 kb on + strand at 1870.399 kb on + strand at 1870.400 kb on - strand at 1870.568 kb on - strand at 1870.577 kb on + strand, within IAI46_08735 at 1870.578 kb on - strand, within IAI46_08735 at 1870.578 kb on - strand, within IAI46_08735 at 1870.601 kb on + strand, within IAI46_08735 at 1870.601 kb on + strand, within IAI46_08735 at 1870.602 kb on - strand, within IAI46_08735 at 1870.722 kb on + strand, within IAI46_08735 at 1870.723 kb on - strand, within IAI46_08735 at 1870.729 kb on + strand, within IAI46_08735 at 1870.738 kb on + strand, within IAI46_08735 at 1870.739 kb on - strand, within IAI46_08735 at 1870.739 kb on - strand, within IAI46_08735 at 1870.787 kb on + strand, within IAI46_08735 at 1870.835 kb on + strand, within IAI46_08735 at 1870.836 kb on - strand, within IAI46_08735 at 1870.837 kb on + strand, within IAI46_08735 at 1870.838 kb on - strand, within IAI46_08735 at 1870.850 kb on + strand, within IAI46_08735 at 1870.851 kb on - strand, within IAI46_08735 at 1870.851 kb on - strand, within IAI46_08735 at 1870.882 kb on + strand, within IAI46_08735 at 1870.882 kb on + strand, within IAI46_08735 at 1870.925 kb on + strand, within IAI46_08735 at 1870.925 kb on + strand, within IAI46_08735 at 1871.187 kb on + strand, within IAI46_08735 at 1871.229 kb on + strand, within IAI46_08735 at 1871.331 kb on - strand, within IAI46_08735 at 1871.512 kb on + strand, within IAI46_08735 at 1871.532 kb on - strand, within IAI46_08735 at 1871.543 kb on + strand, within IAI46_08735 at 1871.546 kb on + strand, within IAI46_08735 at 1871.587 kb on - strand, within IAI46_08735 at 1871.640 kb on + strand, within IAI46_08735 at 1871.641 kb on - strand, within IAI46_08735 at 1871.644 kb on + strand, within IAI46_08735 at 1871.717 kb on + strand, within IAI46_08735 at 1871.718 kb on - strand, within IAI46_08735 at 1871.735 kb on + strand, within IAI46_08735 at 1871.735 kb on + strand, within IAI46_08735 at 1871.736 kb on - strand, within IAI46_08735 at 1871.737 kb on + strand, within IAI46_08735 at 1871.738 kb on - strand, within IAI46_08735 at 1871.926 kb on + strand, within IAI46_08735 at 1871.927 kb on - strand, within IAI46_08735 at 1872.001 kb on + strand, within IAI46_08735 at 1872.002 kb on - strand, within IAI46_08735 at 1872.052 kb on - strand at 1872.064 kb on + strand at 1872.064 kb on + strand at 1872.065 kb on - strand at 1872.065 kb on - strand at 1872.071 kb on + strand at 1872.071 kb on + strand at 1872.072 kb on - strand at 1872.110 kb on + strand at 1872.110 kb on + strand at 1872.111 kb on - strand at 1872.171 kb on - strand at 1872.179 kb on - strand at 1872.231 kb on - strand at 1872.243 kb on + strand at 1872.253 kb on + strand at 1872.381 kb on + strand at 1872.527 kb on + strand, within IAI46_08740 at 1872.542 kb on + strand, within IAI46_08740 at 1872.542 kb on + strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.551 kb on + strand, within IAI46_08740 at 1872.596 kb on + strand, within IAI46_08740 at 1872.596 kb on + strand, within IAI46_08740 at 1872.597 kb on - strand, within IAI46_08740 at 1872.597 kb on - strand, within IAI46_08740 at 1872.597 kb on - strand, within IAI46_08740 at 1872.650 kb on + strand, within IAI46_08740 at 1872.651 kb on - strand, within IAI46_08740 at 1872.676 kb on + strand, within IAI46_08740 at 1872.727 kb on + strand, within IAI46_08740 at 1872.812 kb on + strand, within IAI46_08740 at 1872.917 kb on + strand at 1872.917 kb on + strand at 1872.960 kb on + strand at 1872.961 kb on - strand at 1873.044 kb on - strand at 1873.213 kb on + strand, within IAI46_08745 at 1873.214 kb on - strand, within IAI46_08745
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,870,188 + +0.1 1,870,189 - -1.0 1,870,199 + +0.6 1,870,240 + +0.3 1,870,241 - -0.3 1,870,241 - -0.6 1,870,278 - +0.3 1,870,286 - +0.6 1,870,291 + +0.7 1,870,291 + -0.2 1,870,298 + +0.2 1,870,345 + -0.8 1,870,346 - -0.4 1,870,361 + -1.2 1,870,376 + -0.2 1,870,377 - +1.1 1,870,399 + -0.6 1,870,399 + -1.0 1,870,400 - +0.0 1,870,568 - +0.8 1,870,577 + IAI46_08735 0.10 -1.0 1,870,578 - IAI46_08735 0.10 +0.6 1,870,578 - IAI46_08735 0.10 -0.2 1,870,601 + IAI46_08735 0.11 -0.6 1,870,601 + IAI46_08735 0.11 -0.3 1,870,602 - IAI46_08735 0.11 -0.9 1,870,722 + IAI46_08735 0.18 +0.6 1,870,723 - IAI46_08735 0.18 -0.7 1,870,729 + IAI46_08735 0.18 +0.2 1,870,738 + IAI46_08735 0.19 +0.5 1,870,739 - IAI46_08735 0.19 +0.5 1,870,739 - IAI46_08735 0.19 +0.9 1,870,787 + IAI46_08735 0.21 +0.9 1,870,835 + IAI46_08735 0.24 +0.4 1,870,836 - IAI46_08735 0.24 -0.6 1,870,837 + IAI46_08735 0.24 -1.1 1,870,838 - IAI46_08735 0.24 +0.1 1,870,850 + IAI46_08735 0.25 +0.4 1,870,851 - IAI46_08735 0.25 -0.5 1,870,851 - IAI46_08735 0.25 +0.7 1,870,882 + IAI46_08735 0.27 +0.0 1,870,882 + IAI46_08735 0.27 -0.1 1,870,925 + IAI46_08735 0.29 +0.4 1,870,925 + IAI46_08735 0.29 +0.3 1,871,187 + IAI46_08735 0.43 -0.0 1,871,229 + IAI46_08735 0.45 +0.4 1,871,331 - IAI46_08735 0.51 -0.1 1,871,512 + IAI46_08735 0.61 -0.9 1,871,532 - IAI46_08735 0.62 -0.4 1,871,543 + IAI46_08735 0.63 -0.2 1,871,546 + IAI46_08735 0.63 -0.0 1,871,587 - IAI46_08735 0.65 +0.8 1,871,640 + IAI46_08735 0.68 -0.2 1,871,641 - IAI46_08735 0.68 -1.6 1,871,644 + IAI46_08735 0.68 -2.0 1,871,717 + IAI46_08735 0.72 -0.5 1,871,718 - IAI46_08735 0.72 -0.2 1,871,735 + IAI46_08735 0.73 -0.2 1,871,735 + IAI46_08735 0.73 +0.3 1,871,736 - IAI46_08735 0.73 -2.2 1,871,737 + IAI46_08735 0.73 +0.7 1,871,738 - IAI46_08735 0.73 +0.2 1,871,926 + IAI46_08735 0.83 +1.8 1,871,927 - IAI46_08735 0.83 -0.5 1,872,001 + IAI46_08735 0.87 -0.7 1,872,002 - IAI46_08735 0.87 +0.2 1,872,052 - +0.4 1,872,064 + -0.0 1,872,064 + +0.8 1,872,065 - +2.0 1,872,065 - +0.2 1,872,071 + -0.7 1,872,071 + +0.0 1,872,072 - -0.4 1,872,110 + +0.0 1,872,110 + -0.1 1,872,111 - +0.2 1,872,171 - +0.6 1,872,179 - -0.4 1,872,231 - -0.1 1,872,243 + -0.0 1,872,253 + -0.5 1,872,381 + -1.6 1,872,527 + IAI46_08740 0.21 +1.6 1,872,542 + IAI46_08740 0.23 +1.4 1,872,542 + IAI46_08740 0.23 -2.0 1,872,546 - IAI46_08740 0.24 -0.5 1,872,546 - IAI46_08740 0.24 +0.7 1,872,546 - IAI46_08740 0.24 +1.3 1,872,546 - IAI46_08740 0.24 +0.5 1,872,551 + IAI46_08740 0.25 +0.5 1,872,596 + IAI46_08740 0.33 +1.1 1,872,596 + IAI46_08740 0.33 -1.5 1,872,597 - IAI46_08740 0.33 +1.0 1,872,597 - IAI46_08740 0.33 +0.0 1,872,597 - IAI46_08740 0.33 +0.9 1,872,650 + IAI46_08740 0.43 -1.2 1,872,651 - IAI46_08740 0.43 -0.5 1,872,676 + IAI46_08740 0.48 +0.9 1,872,727 + IAI46_08740 0.57 +0.8 1,872,812 + IAI46_08740 0.72 +1.8 1,872,917 + -0.7 1,872,917 + -0.6 1,872,960 + +0.1 1,872,961 - +0.1 1,873,044 - -0.2 1,873,213 + IAI46_08745 0.28 -0.0 1,873,214 - IAI46_08745 0.29 +1.6
Or see this region's nucleotide sequence