Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05030 and IAI46_05035 are separated by 139 nucleotides IAI46_05035 and IAI46_05040 are separated by 155 nucleotides IAI46_05040 and IAI46_05045 are separated by 35 nucleotides
IAI46_05030: IAI46_05030 - peptidylprolyl isomerase, at 1,085,068 to 1,086,951
_05030
IAI46_05035: IAI46_05035 - helix-hairpin-helix domain-containing protein, at 1,087,091 to 1,087,480
_05035
IAI46_05040: IAI46_05040 - YbgC/FadM family acyl-CoA thioesterase, at 1,087,636 to 1,088,049
_05040
IAI46_05045: IAI46_05045 - 7-cyano-7-deazaguanine synthase QueC, at 1,088,085 to 1,088,783
_05045
Position (kb)
1087
1088 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1086.122 kb on + strand, within IAI46_05030 at 1086.123 kb on - strand, within IAI46_05030 at 1086.221 kb on - strand, within IAI46_05030 at 1086.434 kb on + strand, within IAI46_05030 at 1086.742 kb on + strand, within IAI46_05030 at 1086.773 kb on + strand at 1086.774 kb on - strand at 1086.835 kb on + strand at 1086.900 kb on + strand at 1087.086 kb on - strand at 1087.086 kb on - strand at 1087.086 kb on - strand at 1087.399 kb on + strand, within IAI46_05035 at 1087.400 kb on - strand, within IAI46_05035 at 1087.481 kb on + strand at 1087.485 kb on + strand at 1087.485 kb on + strand at 1087.506 kb on + strand at 1087.507 kb on - strand at 1087.548 kb on + strand at 1087.549 kb on - strand at 1087.608 kb on - strand at 1087.608 kb on - strand at 1087.635 kb on + strand at 1087.667 kb on - strand at 1087.692 kb on + strand, within IAI46_05040 at 1087.800 kb on + strand, within IAI46_05040 at 1087.800 kb on + strand, within IAI46_05040 at 1087.801 kb on - strand, within IAI46_05040 at 1087.801 kb on - strand, within IAI46_05040 at 1087.816 kb on + strand, within IAI46_05040 at 1088.144 kb on - strand at 1088.216 kb on - strand, within IAI46_05045 at 1088.216 kb on - strand, within IAI46_05045 at 1088.257 kb on + strand, within IAI46_05045 at 1088.257 kb on + strand, within IAI46_05045 at 1088.257 kb on + strand, within IAI46_05045 at 1088.257 kb on + strand, within IAI46_05045 at 1088.258 kb on - strand, within IAI46_05045 at 1088.258 kb on - strand, within IAI46_05045 at 1088.258 kb on - strand, within IAI46_05045 at 1088.258 kb on - strand, within IAI46_05045 at 1088.258 kb on - strand, within IAI46_05045 at 1088.258 kb on - strand, within IAI46_05045 at 1088.389 kb on + strand, within IAI46_05045 at 1088.452 kb on + strand, within IAI46_05045 at 1088.452 kb on + strand, within IAI46_05045 at 1088.453 kb on - strand, within IAI46_05045 at 1088.453 kb on - strand, within IAI46_05045 at 1088.453 kb on - strand, within IAI46_05045
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,086,122 + IAI46_05030 0.56 +1.3 1,086,123 - IAI46_05030 0.56 +0.1 1,086,221 - IAI46_05030 0.61 +0.2 1,086,434 + IAI46_05030 0.73 -1.2 1,086,742 + IAI46_05030 0.89 +0.0 1,086,773 + +0.8 1,086,774 - +1.8 1,086,835 + -0.9 1,086,900 + +1.1 1,087,086 - +0.4 1,087,086 - +0.4 1,087,086 - +1.1 1,087,399 + IAI46_05035 0.79 -0.3 1,087,400 - IAI46_05035 0.79 -0.2 1,087,481 + -0.7 1,087,485 + +0.1 1,087,485 + -0.3 1,087,506 + -0.5 1,087,507 - +0.5 1,087,548 + -0.5 1,087,549 - +1.0 1,087,608 - +0.8 1,087,608 - -0.2 1,087,635 + +0.4 1,087,667 - -0.6 1,087,692 + IAI46_05040 0.14 -0.1 1,087,800 + IAI46_05040 0.40 -0.1 1,087,800 + IAI46_05040 0.40 +0.6 1,087,801 - IAI46_05040 0.40 +0.5 1,087,801 - IAI46_05040 0.40 -0.2 1,087,816 + IAI46_05040 0.43 +0.0 1,088,144 - -0.4 1,088,216 - IAI46_05045 0.19 +0.8 1,088,216 - IAI46_05045 0.19 +0.4 1,088,257 + IAI46_05045 0.25 -1.9 1,088,257 + IAI46_05045 0.25 -0.1 1,088,257 + IAI46_05045 0.25 +0.5 1,088,257 + IAI46_05045 0.25 +0.8 1,088,258 - IAI46_05045 0.25 +0.1 1,088,258 - IAI46_05045 0.25 +0.3 1,088,258 - IAI46_05045 0.25 +0.2 1,088,258 - IAI46_05045 0.25 +0.2 1,088,258 - IAI46_05045 0.25 +0.3 1,088,258 - IAI46_05045 0.25 -1.5 1,088,389 + IAI46_05045 0.43 -0.0 1,088,452 + IAI46_05045 0.53 -0.3 1,088,452 + IAI46_05045 0.53 -0.2 1,088,453 - IAI46_05045 0.53 +0.3 1,088,453 - IAI46_05045 0.53 +0.3 1,088,453 - IAI46_05045 0.53 +0.4
Or see this region's nucleotide sequence