Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03265 and IAI46_03270 are separated by 45 nucleotides IAI46_03270 and IAI46_03275 are separated by 56 nucleotides IAI46_03275 and IAI46_03280 are separated by 268 nucleotides
IAI46_03265: IAI46_03265 - co-chaperone DjlA, at 702,631 to 703,452
_03265
IAI46_03270: IAI46_03270 - bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA, at 703,498 to 704,148
_03270
IAI46_03275: IAI46_03275 - RNA polymerase-associated protein RapA, at 704,205 to 707,111
_03275
IAI46_03280: IAI46_03280 - DNA polymerase II, at 707,380 to 709,743
_03280
Position (kb) 704
705
706
707
708 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 703.262 kb on + strand, within IAI46_03265 at 703.262 kb on + strand, within IAI46_03265 at 703.263 kb on - strand, within IAI46_03265 at 703.263 kb on - strand, within IAI46_03265 at 703.263 kb on - strand, within IAI46_03265 at 703.472 kb on - strand at 703.491 kb on - strand at 703.580 kb on - strand, within IAI46_03270 at 703.617 kb on - strand, within IAI46_03270 at 703.636 kb on - strand, within IAI46_03270 at 703.656 kb on + strand, within IAI46_03270 at 703.656 kb on + strand, within IAI46_03270 at 703.656 kb on + strand, within IAI46_03270 at 703.656 kb on + strand, within IAI46_03270 at 703.657 kb on - strand, within IAI46_03270 at 703.657 kb on - strand, within IAI46_03270 at 703.657 kb on - strand, within IAI46_03270 at 703.657 kb on - strand, within IAI46_03270 at 703.819 kb on + strand, within IAI46_03270 at 703.966 kb on - strand, within IAI46_03270 at 704.032 kb on - strand, within IAI46_03270 at 704.088 kb on + strand at 704.138 kb on + strand at 704.139 kb on - strand at 704.139 kb on - strand at 704.139 kb on - strand at 704.139 kb on - strand at 704.187 kb on + strand at 704.187 kb on + strand at 704.187 kb on + strand at 704.188 kb on - strand at 704.188 kb on - strand at 704.188 kb on - strand at 704.188 kb on - strand at 704.304 kb on + strand at 704.305 kb on - strand at 704.305 kb on - strand at 704.653 kb on + strand, within IAI46_03275 at 704.653 kb on + strand, within IAI46_03275 at 704.654 kb on - strand, within IAI46_03275 at 704.654 kb on - strand, within IAI46_03275 at 704.654 kb on - strand, within IAI46_03275 at 704.654 kb on - strand, within IAI46_03275 at 704.654 kb on - strand, within IAI46_03275 at 704.654 kb on - strand, within IAI46_03275 at 704.654 kb on - strand, within IAI46_03275 at 704.835 kb on - strand, within IAI46_03275 at 704.835 kb on - strand, within IAI46_03275 at 705.184 kb on + strand, within IAI46_03275 at 705.184 kb on + strand, within IAI46_03275 at 705.191 kb on + strand, within IAI46_03275 at 705.210 kb on - strand, within IAI46_03275 at 705.210 kb on - strand, within IAI46_03275 at 705.210 kb on - strand, within IAI46_03275 at 705.210 kb on - strand, within IAI46_03275 at 705.332 kb on + strand, within IAI46_03275 at 705.333 kb on - strand, within IAI46_03275 at 705.333 kb on - strand, within IAI46_03275 at 705.333 kb on - strand, within IAI46_03275 at 705.467 kb on - strand, within IAI46_03275 at 705.528 kb on - strand, within IAI46_03275 at 705.528 kb on - strand, within IAI46_03275 at 705.623 kb on - strand, within IAI46_03275 at 705.623 kb on - strand, within IAI46_03275 at 705.623 kb on - strand, within IAI46_03275 at 705.623 kb on - strand, within IAI46_03275 at 705.623 kb on - strand, within IAI46_03275 at 705.767 kb on + strand, within IAI46_03275 at 706.044 kb on - strand, within IAI46_03275 at 706.096 kb on + strand, within IAI46_03275 at 706.226 kb on - strand, within IAI46_03275 at 706.226 kb on - strand, within IAI46_03275 at 706.435 kb on + strand, within IAI46_03275 at 706.436 kb on - strand, within IAI46_03275 at 706.436 kb on - strand, within IAI46_03275 at 706.566 kb on - strand, within IAI46_03275 at 706.566 kb on - strand, within IAI46_03275 at 706.566 kb on - strand, within IAI46_03275 at 706.624 kb on + strand, within IAI46_03275 at 706.625 kb on - strand, within IAI46_03275 at 706.709 kb on - strand, within IAI46_03275 at 706.864 kb on + strand at 706.864 kb on + strand at 706.865 kb on - strand at 706.865 kb on - strand at 706.865 kb on - strand at 707.021 kb on + strand at 707.111 kb on + strand at 707.111 kb on + strand at 707.111 kb on + strand at 707.111 kb on + strand at 707.111 kb on + strand at 707.111 kb on + strand at 707.112 kb on - strand at 707.112 kb on - strand at 707.112 kb on - strand at 707.113 kb on + strand at 707.113 kb on + strand at 707.113 kb on + strand at 707.113 kb on + strand at 707.113 kb on + strand at 707.113 kb on + strand at 707.114 kb on - strand at 707.114 kb on - strand at 707.114 kb on - strand at 707.114 kb on - strand at 707.114 kb on - strand at 707.114 kb on - strand at 707.114 kb on - strand at 707.133 kb on + strand at 707.133 kb on + strand at 707.134 kb on - strand at 707.137 kb on + strand at 707.138 kb on - strand at 707.200 kb on + strand at 707.201 kb on - strand at 707.206 kb on - strand at 707.220 kb on + strand at 707.220 kb on + strand at 707.220 kb on + strand at 707.220 kb on + strand at 707.220 kb on + strand at 707.220 kb on + strand at 707.220 kb on + strand at 707.221 kb on - strand at 707.221 kb on - strand at 707.221 kb on - strand at 707.224 kb on + strand at 707.224 kb on + strand at 707.224 kb on + strand at 707.224 kb on + strand at 707.224 kb on + strand at 707.224 kb on + strand at 707.225 kb on - strand at 707.225 kb on - strand at 707.225 kb on - strand at 707.225 kb on - strand at 707.239 kb on + strand at 707.239 kb on + strand at 707.239 kb on + strand at 707.239 kb on + strand at 707.239 kb on + strand at 707.239 kb on + strand at 707.239 kb on + strand at 707.239 kb on + strand at 707.240 kb on - strand at 707.240 kb on - strand at 707.240 kb on - strand at 707.240 kb on - strand at 707.240 kb on - strand at 707.240 kb on - strand at 707.240 kb on - strand at 707.292 kb on + strand at 707.293 kb on - strand at 707.297 kb on + strand at 707.440 kb on + strand at 707.441 kb on - strand at 707.441 kb on - strand at 707.442 kb on + strand at 707.442 kb on + strand at 707.442 kb on + strand at 707.442 kb on + strand at 707.442 kb on + strand at 707.443 kb on - strand at 707.443 kb on - strand at 707.443 kb on - strand at 707.543 kb on + strand at 707.543 kb on + strand at 707.543 kb on + strand at 707.543 kb on + strand at 707.543 kb on + strand at 707.544 kb on - strand at 707.544 kb on - strand at 707.544 kb on - strand at 707.595 kb on + strand at 707.595 kb on + strand at 707.595 kb on + strand at 707.596 kb on - strand at 707.596 kb on - strand at 707.598 kb on - strand at 707.649 kb on - strand, within IAI46_03280 at 707.710 kb on - strand, within IAI46_03280 at 707.726 kb on + strand, within IAI46_03280 at 707.726 kb on + strand, within IAI46_03280 at 707.727 kb on - strand, within IAI46_03280 at 707.775 kb on - strand, within IAI46_03280 at 707.775 kb on - strand, within IAI46_03280 at 707.775 kb on - strand, within IAI46_03280 at 707.840 kb on + strand, within IAI46_03280 at 707.840 kb on + strand, within IAI46_03280 at 707.840 kb on + strand, within IAI46_03280 at 707.840 kb on + strand, within IAI46_03280 at 707.841 kb on - strand, within IAI46_03280 at 707.841 kb on - strand, within IAI46_03280 at 707.885 kb on + strand, within IAI46_03280 at 707.922 kb on + strand, within IAI46_03280 at 707.922 kb on + strand, within IAI46_03280 at 707.923 kb on - strand, within IAI46_03280 at 707.943 kb on - strand, within IAI46_03280 at 708.043 kb on + strand, within IAI46_03280 at 708.110 kb on + strand, within IAI46_03280 at 708.111 kb on - strand, within IAI46_03280
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 703,262 + IAI46_03265 0.77 -0.3 703,262 + IAI46_03265 0.77 -0.6 703,263 - IAI46_03265 0.77 +0.5 703,263 - IAI46_03265 0.77 +1.0 703,263 - IAI46_03265 0.77 +1.7 703,472 - -1.2 703,491 - +0.3 703,580 - IAI46_03270 0.13 +0.9 703,617 - IAI46_03270 0.18 +0.3 703,636 - IAI46_03270 0.21 +0.0 703,656 + IAI46_03270 0.24 +0.7 703,656 + IAI46_03270 0.24 +0.3 703,656 + IAI46_03270 0.24 +0.5 703,656 + IAI46_03270 0.24 +0.1 703,657 - IAI46_03270 0.24 +0.9 703,657 - IAI46_03270 0.24 -1.4 703,657 - IAI46_03270 0.24 +0.0 703,657 - IAI46_03270 0.24 -0.8 703,819 + IAI46_03270 0.49 -0.6 703,966 - IAI46_03270 0.72 +0.0 704,032 - IAI46_03270 0.82 -1.5 704,088 + +0.3 704,138 + -0.4 704,139 - +0.0 704,139 - +0.7 704,139 - +0.3 704,139 - -0.1 704,187 + -0.5 704,187 + -0.6 704,187 + +0.3 704,188 - +0.8 704,188 - -0.4 704,188 - -1.4 704,188 - +0.2 704,304 + -0.9 704,305 - -0.7 704,305 - -0.2 704,653 + IAI46_03275 0.15 -1.4 704,653 + IAI46_03275 0.15 -1.4 704,654 - IAI46_03275 0.15 -0.6 704,654 - IAI46_03275 0.15 -0.7 704,654 - IAI46_03275 0.15 -0.6 704,654 - IAI46_03275 0.15 +0.1 704,654 - IAI46_03275 0.15 -0.4 704,654 - IAI46_03275 0.15 +0.1 704,654 - IAI46_03275 0.15 +0.1 704,835 - IAI46_03275 0.22 +0.4 704,835 - IAI46_03275 0.22 -0.3 705,184 + IAI46_03275 0.34 +0.2 705,184 + IAI46_03275 0.34 -0.9 705,191 + IAI46_03275 0.34 -0.4 705,210 - IAI46_03275 0.35 -0.7 705,210 - IAI46_03275 0.35 -0.1 705,210 - IAI46_03275 0.35 -0.5 705,210 - IAI46_03275 0.35 -1.1 705,332 + IAI46_03275 0.39 -1.2 705,333 - IAI46_03275 0.39 +0.0 705,333 - IAI46_03275 0.39 -1.2 705,333 - IAI46_03275 0.39 -0.1 705,467 - IAI46_03275 0.43 -0.6 705,528 - IAI46_03275 0.46 -0.8 705,528 - IAI46_03275 0.46 -1.0 705,623 - IAI46_03275 0.49 -1.1 705,623 - IAI46_03275 0.49 -0.6 705,623 - IAI46_03275 0.49 -0.3 705,623 - IAI46_03275 0.49 -0.7 705,623 - IAI46_03275 0.49 -1.0 705,767 + IAI46_03275 0.54 -1.8 706,044 - IAI46_03275 0.63 +0.4 706,096 + IAI46_03275 0.65 -2.0 706,226 - IAI46_03275 0.70 -1.6 706,226 - IAI46_03275 0.70 +0.2 706,435 + IAI46_03275 0.77 -0.1 706,436 - IAI46_03275 0.77 -0.4 706,436 - IAI46_03275 0.77 -1.1 706,566 - IAI46_03275 0.81 -1.9 706,566 - IAI46_03275 0.81 -1.1 706,566 - IAI46_03275 0.81 -0.1 706,624 + IAI46_03275 0.83 -0.7 706,625 - IAI46_03275 0.83 -0.1 706,709 - IAI46_03275 0.86 -0.2 706,864 + -0.7 706,864 + -1.8 706,865 - -0.4 706,865 - -1.9 706,865 - -1.1 707,021 + -0.1 707,111 + +0.4 707,111 + -1.2 707,111 + -0.2 707,111 + -0.4 707,111 + -0.7 707,111 + -0.9 707,112 - -1.8 707,112 - -0.3 707,112 - -0.7 707,113 + -0.7 707,113 + +1.4 707,113 + -0.6 707,113 + -0.1 707,113 + -0.4 707,113 + -0.2 707,114 - -0.1 707,114 - -0.6 707,114 - -0.7 707,114 - -1.0 707,114 - -3.5 707,114 - -0.4 707,114 - -0.9 707,133 + -0.2 707,133 + +0.1 707,134 - -0.3 707,137 + -0.9 707,138 - +0.2 707,200 + -0.4 707,201 - +0.3 707,206 - -0.2 707,220 + -1.2 707,220 + +0.2 707,220 + -1.1 707,220 + +0.1 707,220 + -0.3 707,220 + +0.9 707,220 + -0.7 707,221 - -0.5 707,221 - +0.1 707,221 - +0.1 707,224 + -0.9 707,224 + -2.1 707,224 + -0.3 707,224 + -1.0 707,224 + -0.6 707,224 + -0.6 707,225 - -0.1 707,225 - +0.0 707,225 - +0.8 707,225 - +0.6 707,239 + +0.1 707,239 + -0.1 707,239 + -1.3 707,239 + -0.8 707,239 + -1.0 707,239 + -1.0 707,239 + -0.3 707,239 + -1.4 707,240 - +0.2 707,240 - -0.2 707,240 - +0.9 707,240 - +0.4 707,240 - -0.1 707,240 - +0.4 707,240 - +1.8 707,292 + -1.1 707,293 - -0.1 707,297 + -0.6 707,440 + -0.1 707,441 - +0.0 707,441 - +0.9 707,442 + -0.2 707,442 + -1.2 707,442 + -0.3 707,442 + -0.7 707,442 + -1.3 707,443 - -0.5 707,443 - +0.4 707,443 - -0.0 707,543 + -0.8 707,543 + -0.7 707,543 + -0.4 707,543 + -0.5 707,543 + -2.1 707,544 - -1.4 707,544 - +1.2 707,544 - +0.3 707,595 + -0.6 707,595 + -0.2 707,595 + -0.1 707,596 - +0.7 707,596 - -0.8 707,598 - -0.9 707,649 - IAI46_03280 0.11 +0.2 707,710 - IAI46_03280 0.14 -0.1 707,726 + IAI46_03280 0.15 -0.8 707,726 + IAI46_03280 0.15 -0.4 707,727 - IAI46_03280 0.15 -0.5 707,775 - IAI46_03280 0.17 -0.5 707,775 - IAI46_03280 0.17 -0.8 707,775 - IAI46_03280 0.17 +0.9 707,840 + IAI46_03280 0.19 +0.9 707,840 + IAI46_03280 0.19 +0.2 707,840 + IAI46_03280 0.19 -0.5 707,840 + IAI46_03280 0.19 -0.5 707,841 - IAI46_03280 0.20 -1.2 707,841 - IAI46_03280 0.20 +0.5 707,885 + IAI46_03280 0.21 +1.0 707,922 + IAI46_03280 0.23 +0.2 707,922 + IAI46_03280 0.23 -0.6 707,923 - IAI46_03280 0.23 -1.1 707,943 - IAI46_03280 0.24 -0.5 708,043 + IAI46_03280 0.28 -1.4 708,110 + IAI46_03280 0.31 -0.4 708,111 - IAI46_03280 0.31 -0.2
Or see this region's nucleotide sequence