Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03245 and IAI46_03250 overlap by 8 nucleotides IAI46_03250 and IAI46_03255 overlap by 14 nucleotides IAI46_03255 and IAI46_03260 are separated by 65 nucleotides
IAI46_03245: IAI46_03245 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 696,885 to 697,703
_03245
IAI46_03250: IAI46_03250 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 697,696 to 698,688
_03250
IAI46_03255: IAI46_03255 - peptidylprolyl isomerase SurA, at 698,675 to 699,973
_03255
IAI46_03260: IAI46_03260 - LPS assembly protein LptD, at 700,039 to 702,402
_03260
Position (kb) 698
699
700 Strain fitness (log2 ratio) -2
-1
0
1 at 697.715 kb on - strand at 697.866 kb on - strand, within IAI46_03250 at 697.866 kb on - strand, within IAI46_03250 at 697.896 kb on - strand, within IAI46_03250 at 697.896 kb on - strand, within IAI46_03250 at 697.896 kb on - strand, within IAI46_03250 at 697.929 kb on - strand, within IAI46_03250 at 697.978 kb on - strand, within IAI46_03250 at 697.978 kb on - strand, within IAI46_03250 at 698.017 kb on - strand, within IAI46_03250 at 698.017 kb on - strand, within IAI46_03250 at 698.017 kb on - strand, within IAI46_03250 at 698.017 kb on - strand, within IAI46_03250 at 698.017 kb on - strand, within IAI46_03250 at 698.021 kb on - strand, within IAI46_03250 at 698.021 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.079 kb on - strand, within IAI46_03250 at 698.080 kb on + strand, within IAI46_03250 at 698.081 kb on - strand, within IAI46_03250 at 698.081 kb on - strand, within IAI46_03250 at 698.081 kb on - strand, within IAI46_03250 at 698.081 kb on - strand, within IAI46_03250 at 698.081 kb on - strand, within IAI46_03250 at 698.081 kb on - strand, within IAI46_03250 at 698.240 kb on - strand, within IAI46_03250 at 698.403 kb on - strand, within IAI46_03250 at 698.403 kb on - strand, within IAI46_03250 at 698.403 kb on - strand, within IAI46_03250 at 698.476 kb on - strand, within IAI46_03250 at 698.514 kb on - strand, within IAI46_03250 at 698.666 kb on - strand at 698.666 kb on - strand at 698.666 kb on - strand at 698.671 kb on - strand at 698.676 kb on + strand at 698.677 kb on - strand at 698.929 kb on - strand, within IAI46_03255 at 699.035 kb on - strand, within IAI46_03255 at 699.035 kb on - strand, within IAI46_03255 at 699.135 kb on - strand, within IAI46_03255 at 699.592 kb on - strand, within IAI46_03255 at 699.601 kb on - strand, within IAI46_03255 at 699.601 kb on - strand, within IAI46_03255 at 699.616 kb on - strand, within IAI46_03255 at 699.616 kb on - strand, within IAI46_03255 at 699.749 kb on - strand, within IAI46_03255 at 699.849 kb on - strand at 699.896 kb on - strand at 699.953 kb on - strand at 699.990 kb on - strand at 699.990 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 697,715 - +0.6 697,866 - IAI46_03250 0.17 +0.6 697,866 - IAI46_03250 0.17 +0.1 697,896 - IAI46_03250 0.20 +1.2 697,896 - IAI46_03250 0.20 +1.3 697,896 - IAI46_03250 0.20 +0.3 697,929 - IAI46_03250 0.23 +1.5 697,978 - IAI46_03250 0.28 +0.8 697,978 - IAI46_03250 0.28 +1.5 698,017 - IAI46_03250 0.32 -0.3 698,017 - IAI46_03250 0.32 -0.3 698,017 - IAI46_03250 0.32 +0.4 698,017 - IAI46_03250 0.32 -0.2 698,017 - IAI46_03250 0.32 -0.8 698,021 - IAI46_03250 0.33 +0.1 698,021 - IAI46_03250 0.33 -0.4 698,079 - IAI46_03250 0.39 +0.8 698,079 - IAI46_03250 0.39 +0.7 698,079 - IAI46_03250 0.39 +0.5 698,079 - IAI46_03250 0.39 -0.6 698,079 - IAI46_03250 0.39 +0.9 698,079 - IAI46_03250 0.39 +0.3 698,079 - IAI46_03250 0.39 +1.4 698,079 - IAI46_03250 0.39 +0.8 698,079 - IAI46_03250 0.39 -0.5 698,079 - IAI46_03250 0.39 +0.1 698,080 + IAI46_03250 0.39 -0.4 698,081 - IAI46_03250 0.39 -0.2 698,081 - IAI46_03250 0.39 -0.5 698,081 - IAI46_03250 0.39 -0.2 698,081 - IAI46_03250 0.39 +1.5 698,081 - IAI46_03250 0.39 +0.6 698,081 - IAI46_03250 0.39 -0.4 698,240 - IAI46_03250 0.55 +0.0 698,403 - IAI46_03250 0.71 -0.4 698,403 - IAI46_03250 0.71 +0.3 698,403 - IAI46_03250 0.71 +0.9 698,476 - IAI46_03250 0.79 -1.3 698,514 - IAI46_03250 0.82 +0.1 698,666 - -0.5 698,666 - -0.2 698,666 - -0.2 698,671 - -1.8 698,676 + +0.6 698,677 - -1.2 698,929 - IAI46_03255 0.20 -0.2 699,035 - IAI46_03255 0.28 +0.6 699,035 - IAI46_03255 0.28 -1.1 699,135 - IAI46_03255 0.35 -0.5 699,592 - IAI46_03255 0.71 -1.5 699,601 - IAI46_03255 0.71 -1.1 699,601 - IAI46_03255 0.71 -0.6 699,616 - IAI46_03255 0.72 -0.4 699,616 - IAI46_03255 0.72 -0.8 699,749 - IAI46_03255 0.83 -0.9 699,849 - -0.6 699,896 - +1.2 699,953 - -1.4 699,990 - -0.4 699,990 - -0.7
Or see this region's nucleotide sequence