Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00645 and IAI46_00650 are separated by 367 nucleotides IAI46_00650 and IAI46_00655 are separated by 135 nucleotides IAI46_00655 and IAI46_00660 are separated by 62 nucleotides IAI46_00660 and IAI46_00665 are separated by 43 nucleotides IAI46_00665 and IAI46_00670 are separated by 74 nucleotides
IAI46_00645: IAI46_00645 - lipopolysaccharide N-acetylmannosaminouronosyltransferase, at 152,367 to 153,107
_00645
IAI46_00650: IAI46_00650 - amino acid permease, at 153,475 to 154,878
_00650
IAI46_00655: IAI46_00655 - tRNA-Arg, at 155,014 to 155,090
_00655
IAI46_00660: IAI46_00660 - tRNA-His, at 155,153 to 155,228
_00660
IAI46_00665: IAI46_00665 - tRNA-Leu, at 155,272 to 155,358
_00665
IAI46_00670: IAI46_00670 - tRNA-Pro, at 155,433 to 155,509
_00670
Position (kb) 153
154
155 Strain fitness (log2 ratio) -2
-1
0
1
2 at 152.527 kb on + strand, within IAI46_00645 at 152.531 kb on + strand, within IAI46_00645 at 152.531 kb on + strand, within IAI46_00645 at 152.532 kb on - strand, within IAI46_00645 at 152.532 kb on - strand, within IAI46_00645 at 152.566 kb on - strand, within IAI46_00645 at 152.571 kb on + strand, within IAI46_00645 at 152.571 kb on + strand, within IAI46_00645 at 152.572 kb on - strand, within IAI46_00645 at 152.572 kb on - strand, within IAI46_00645 at 152.594 kb on - strand, within IAI46_00645 at 152.609 kb on + strand, within IAI46_00645 at 152.613 kb on + strand, within IAI46_00645 at 152.629 kb on + strand, within IAI46_00645 at 152.767 kb on + strand, within IAI46_00645 at 152.768 kb on - strand, within IAI46_00645 at 152.910 kb on - strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.931 kb on + strand, within IAI46_00645 at 152.932 kb on - strand, within IAI46_00645 at 152.932 kb on - strand, within IAI46_00645 at 152.932 kb on - strand, within IAI46_00645 at 152.932 kb on - strand, within IAI46_00645 at 152.932 kb on - strand, within IAI46_00645 at 152.933 kb on + strand, within IAI46_00645 at 152.952 kb on + strand, within IAI46_00645 at 152.952 kb on + strand, within IAI46_00645 at 152.952 kb on + strand, within IAI46_00645 at 152.953 kb on - strand, within IAI46_00645 at 152.953 kb on - strand, within IAI46_00645 at 152.953 kb on - strand, within IAI46_00645 at 152.953 kb on - strand, within IAI46_00645 at 152.953 kb on - strand, within IAI46_00645 at 153.022 kb on - strand, within IAI46_00645 at 153.031 kb on + strand, within IAI46_00645 at 153.031 kb on + strand, within IAI46_00645 at 153.062 kb on + strand at 153.085 kb on - strand at 153.087 kb on + strand at 153.087 kb on + strand at 153.087 kb on + strand at 153.088 kb on - strand at 153.088 kb on - strand at 153.088 kb on - strand at 153.088 kb on - strand at 153.088 kb on - strand at 153.099 kb on - strand at 153.158 kb on + strand at 153.169 kb on - strand at 153.175 kb on + strand at 153.176 kb on - strand at 153.176 kb on - strand at 153.176 kb on - strand at 153.191 kb on + strand at 153.192 kb on - strand at 153.192 kb on - strand at 153.207 kb on - strand at 153.218 kb on + strand at 153.219 kb on - strand at 153.253 kb on + strand at 153.253 kb on + strand at 153.254 kb on - strand at 153.291 kb on - strand at 153.345 kb on + strand at 153.346 kb on - strand at 153.396 kb on + strand at 153.397 kb on - strand at 153.401 kb on + strand at 153.410 kb on + strand at 153.463 kb on + strand at 153.463 kb on + strand at 153.474 kb on + strand at 153.474 kb on + strand at 153.528 kb on + strand at 153.528 kb on + strand at 153.573 kb on + strand at 153.625 kb on + strand, within IAI46_00650 at 153.625 kb on + strand, within IAI46_00650 at 153.626 kb on - strand, within IAI46_00650 at 153.626 kb on - strand, within IAI46_00650 at 153.626 kb on - strand, within IAI46_00650 at 153.626 kb on - strand, within IAI46_00650 at 153.626 kb on - strand, within IAI46_00650 at 153.627 kb on + strand, within IAI46_00650 at 153.627 kb on + strand, within IAI46_00650 at 153.627 kb on + strand, within IAI46_00650 at 153.628 kb on - strand, within IAI46_00650 at 153.628 kb on - strand, within IAI46_00650 at 153.628 kb on - strand, within IAI46_00650 at 153.657 kb on + strand, within IAI46_00650 at 153.716 kb on - strand, within IAI46_00650 at 153.723 kb on + strand, within IAI46_00650 at 153.723 kb on + strand, within IAI46_00650 at 153.728 kb on - strand, within IAI46_00650 at 153.728 kb on - strand, within IAI46_00650 at 153.739 kb on + strand, within IAI46_00650 at 153.740 kb on - strand, within IAI46_00650 at 153.749 kb on - strand, within IAI46_00650 at 153.766 kb on + strand, within IAI46_00650 at 153.774 kb on + strand, within IAI46_00650 at 153.774 kb on + strand, within IAI46_00650 at 153.775 kb on - strand, within IAI46_00650 at 153.820 kb on + strand, within IAI46_00650 at 153.821 kb on - strand, within IAI46_00650 at 153.821 kb on - strand, within IAI46_00650 at 153.884 kb on + strand, within IAI46_00650 at 154.101 kb on + strand, within IAI46_00650 at 154.101 kb on + strand, within IAI46_00650 at 154.102 kb on - strand, within IAI46_00650 at 154.117 kb on + strand, within IAI46_00650 at 154.118 kb on - strand, within IAI46_00650 at 154.197 kb on + strand, within IAI46_00650 at 154.198 kb on - strand, within IAI46_00650 at 154.209 kb on + strand, within IAI46_00650 at 154.223 kb on - strand, within IAI46_00650 at 154.223 kb on - strand, within IAI46_00650 at 154.317 kb on + strand, within IAI46_00650 at 154.317 kb on + strand, within IAI46_00650 at 154.342 kb on - strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.393 kb on - strand, within IAI46_00650 at 154.404 kb on + strand, within IAI46_00650 at 154.404 kb on + strand, within IAI46_00650 at 154.404 kb on + strand, within IAI46_00650 at 154.405 kb on - strand, within IAI46_00650 at 154.411 kb on + strand, within IAI46_00650 at 154.411 kb on + strand, within IAI46_00650 at 154.412 kb on - strand, within IAI46_00650 at 154.412 kb on - strand, within IAI46_00650 at 154.412 kb on - strand, within IAI46_00650 at 154.511 kb on + strand, within IAI46_00650 at 154.528 kb on - strand, within IAI46_00650 at 154.531 kb on + strand, within IAI46_00650 at 154.532 kb on - strand, within IAI46_00650 at 154.564 kb on + strand, within IAI46_00650 at 154.564 kb on + strand, within IAI46_00650 at 154.565 kb on - strand, within IAI46_00650 at 154.565 kb on - strand, within IAI46_00650 at 154.570 kb on + strand, within IAI46_00650 at 154.570 kb on + strand, within IAI46_00650 at 154.570 kb on + strand, within IAI46_00650 at 154.571 kb on - strand, within IAI46_00650 at 154.630 kb on + strand, within IAI46_00650 at 154.631 kb on - strand, within IAI46_00650 at 154.674 kb on + strand, within IAI46_00650 at 154.675 kb on - strand, within IAI46_00650 at 154.675 kb on - strand, within IAI46_00650 at 154.683 kb on + strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.703 kb on - strand, within IAI46_00650 at 154.703 kb on - strand, within IAI46_00650 at 154.703 kb on - strand, within IAI46_00650 at 154.813 kb on + strand at 154.813 kb on + strand at 154.933 kb on - strand at 155.234 kb on + strand at 155.234 kb on + strand at 155.322 kb on + strand, within IAI46_00665 at 155.396 kb on + strand at 155.416 kb on + strand at 155.416 kb on + strand at 155.543 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.552 kb on - strand at 155.552 kb on - strand at 155.552 kb on - strand at 155.558 kb on + strand at 155.558 kb on + strand at 155.558 kb on + strand at 155.559 kb on - strand at 155.727 kb on + strand at 155.761 kb on + strand at 155.761 kb on + strand at 155.770 kb on + strand at 155.771 kb on - strand at 155.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 152,527 + IAI46_00645 0.22 +0.7 152,531 + IAI46_00645 0.22 -0.1 152,531 + IAI46_00645 0.22 -1.4 152,532 - IAI46_00645 0.22 -0.8 152,532 - IAI46_00645 0.22 +0.3 152,566 - IAI46_00645 0.27 +0.3 152,571 + IAI46_00645 0.28 +0.5 152,571 + IAI46_00645 0.28 +0.4 152,572 - IAI46_00645 0.28 +0.6 152,572 - IAI46_00645 0.28 +0.4 152,594 - IAI46_00645 0.31 -0.1 152,609 + IAI46_00645 0.33 -0.3 152,613 + IAI46_00645 0.33 +0.3 152,629 + IAI46_00645 0.35 +0.2 152,767 + IAI46_00645 0.54 +0.5 152,768 - IAI46_00645 0.54 +1.2 152,910 - IAI46_00645 0.73 +1.0 152,931 + IAI46_00645 0.76 -0.8 152,931 + IAI46_00645 0.76 +0.3 152,931 + IAI46_00645 0.76 -0.1 152,931 + IAI46_00645 0.76 -0.5 152,931 + IAI46_00645 0.76 -0.2 152,931 + IAI46_00645 0.76 +0.6 152,931 + IAI46_00645 0.76 -0.3 152,931 + IAI46_00645 0.76 +1.5 152,932 - IAI46_00645 0.76 -0.3 152,932 - IAI46_00645 0.76 +1.2 152,932 - IAI46_00645 0.76 +0.3 152,932 - IAI46_00645 0.76 +0.3 152,932 - IAI46_00645 0.76 -1.5 152,933 + IAI46_00645 0.76 +0.7 152,952 + IAI46_00645 0.79 +0.3 152,952 + IAI46_00645 0.79 -0.1 152,952 + IAI46_00645 0.79 -1.8 152,953 - IAI46_00645 0.79 -1.7 152,953 - IAI46_00645 0.79 +0.5 152,953 - IAI46_00645 0.79 +1.0 152,953 - IAI46_00645 0.79 +0.3 152,953 - IAI46_00645 0.79 -0.0 153,022 - IAI46_00645 0.88 -0.8 153,031 + IAI46_00645 0.90 -1.0 153,031 + IAI46_00645 0.90 -0.0 153,062 + -0.4 153,085 - -0.5 153,087 + +0.2 153,087 + +0.3 153,087 + +1.7 153,088 - +0.5 153,088 - -0.7 153,088 - -0.1 153,088 - +0.5 153,088 - -0.5 153,099 - +0.7 153,158 + +0.2 153,169 - -0.1 153,175 + -0.2 153,176 - -0.7 153,176 - -1.1 153,176 - -0.9 153,191 + -0.3 153,192 - +0.2 153,192 - +0.3 153,207 - +0.2 153,218 + +0.3 153,219 - +0.7 153,253 + +0.2 153,253 + +0.1 153,254 - +0.7 153,291 - -0.7 153,345 + -0.0 153,346 - +0.5 153,396 + -0.2 153,397 - +0.4 153,401 + +0.1 153,410 + +1.0 153,463 + -0.0 153,463 + -0.1 153,474 + -0.0 153,474 + +0.8 153,528 + +0.8 153,528 + +0.2 153,573 + -0.0 153,625 + IAI46_00650 0.11 -0.7 153,625 + IAI46_00650 0.11 +0.4 153,626 - IAI46_00650 0.11 -0.1 153,626 - IAI46_00650 0.11 +0.5 153,626 - IAI46_00650 0.11 +0.6 153,626 - IAI46_00650 0.11 +0.6 153,626 - IAI46_00650 0.11 +0.1 153,627 + IAI46_00650 0.11 +0.0 153,627 + IAI46_00650 0.11 +0.5 153,627 + IAI46_00650 0.11 +0.7 153,628 - IAI46_00650 0.11 +0.4 153,628 - IAI46_00650 0.11 +0.1 153,628 - IAI46_00650 0.11 +0.9 153,657 + IAI46_00650 0.13 +0.2 153,716 - IAI46_00650 0.17 -0.1 153,723 + IAI46_00650 0.18 +1.1 153,723 + IAI46_00650 0.18 -0.0 153,728 - IAI46_00650 0.18 +0.4 153,728 - IAI46_00650 0.18 -0.0 153,739 + IAI46_00650 0.19 -0.6 153,740 - IAI46_00650 0.19 +0.1 153,749 - IAI46_00650 0.20 +0.0 153,766 + IAI46_00650 0.21 -0.1 153,774 + IAI46_00650 0.21 +0.6 153,774 + IAI46_00650 0.21 -0.5 153,775 - IAI46_00650 0.21 -1.1 153,820 + IAI46_00650 0.25 +0.5 153,821 - IAI46_00650 0.25 +0.5 153,821 - IAI46_00650 0.25 +0.6 153,884 + IAI46_00650 0.29 +0.1 154,101 + IAI46_00650 0.45 +0.0 154,101 + IAI46_00650 0.45 -0.0 154,102 - IAI46_00650 0.45 -0.1 154,117 + IAI46_00650 0.46 +0.9 154,118 - IAI46_00650 0.46 +0.1 154,197 + IAI46_00650 0.51 +0.3 154,198 - IAI46_00650 0.51 +1.0 154,209 + IAI46_00650 0.52 -0.0 154,223 - IAI46_00650 0.53 +0.2 154,223 - IAI46_00650 0.53 +0.3 154,317 + IAI46_00650 0.60 -0.6 154,317 + IAI46_00650 0.60 +2.3 154,342 - IAI46_00650 0.62 +0.0 154,390 + IAI46_00650 0.65 +0.3 154,390 + IAI46_00650 0.65 +0.4 154,390 + IAI46_00650 0.65 +0.5 154,390 + IAI46_00650 0.65 +0.6 154,390 + IAI46_00650 0.65 +0.6 154,391 - IAI46_00650 0.65 +0.3 154,391 - IAI46_00650 0.65 +0.4 154,391 - IAI46_00650 0.65 -0.1 154,391 - IAI46_00650 0.65 +0.4 154,391 - IAI46_00650 0.65 -1.7 154,391 - IAI46_00650 0.65 -0.0 154,391 - IAI46_00650 0.65 +0.1 154,391 - IAI46_00650 0.65 -0.4 154,393 - IAI46_00650 0.65 +0.9 154,404 + IAI46_00650 0.66 +0.6 154,404 + IAI46_00650 0.66 -0.3 154,404 + IAI46_00650 0.66 +0.2 154,405 - IAI46_00650 0.66 +0.5 154,411 + IAI46_00650 0.67 +0.4 154,411 + IAI46_00650 0.67 +0.1 154,412 - IAI46_00650 0.67 -0.5 154,412 - IAI46_00650 0.67 -0.7 154,412 - IAI46_00650 0.67 +0.3 154,511 + IAI46_00650 0.74 -0.2 154,528 - IAI46_00650 0.75 +0.0 154,531 + IAI46_00650 0.75 -0.1 154,532 - IAI46_00650 0.75 +0.2 154,564 + IAI46_00650 0.78 +0.4 154,564 + IAI46_00650 0.78 +0.9 154,565 - IAI46_00650 0.78 +0.1 154,565 - IAI46_00650 0.78 +0.2 154,570 + IAI46_00650 0.78 -0.7 154,570 + IAI46_00650 0.78 +0.2 154,570 + IAI46_00650 0.78 +0.0 154,571 - IAI46_00650 0.78 +1.5 154,630 + IAI46_00650 0.82 +0.1 154,631 - IAI46_00650 0.82 -0.1 154,674 + IAI46_00650 0.85 -0.2 154,675 - IAI46_00650 0.85 +1.2 154,675 - IAI46_00650 0.85 -0.3 154,683 + IAI46_00650 0.86 +0.4 154,684 - IAI46_00650 0.86 +1.8 154,684 - IAI46_00650 0.86 -0.0 154,684 - IAI46_00650 0.86 +0.2 154,684 - IAI46_00650 0.86 +0.2 154,684 - IAI46_00650 0.86 +0.5 154,684 - IAI46_00650 0.86 +0.1 154,693 + IAI46_00650 0.87 +0.5 154,693 + IAI46_00650 0.87 +1.3 154,693 + IAI46_00650 0.87 -0.2 154,693 + IAI46_00650 0.87 +0.2 154,694 - IAI46_00650 0.87 -0.1 154,694 - IAI46_00650 0.87 -0.1 154,694 - IAI46_00650 0.87 +0.8 154,694 - IAI46_00650 0.87 +0.1 154,702 + IAI46_00650 0.87 +0.3 154,702 + IAI46_00650 0.87 +1.0 154,702 + IAI46_00650 0.87 +0.3 154,702 + IAI46_00650 0.87 +0.1 154,702 + IAI46_00650 0.87 +0.6 154,702 + IAI46_00650 0.87 -0.8 154,702 + IAI46_00650 0.87 +1.5 154,703 - IAI46_00650 0.87 +0.4 154,703 - IAI46_00650 0.87 -0.1 154,703 - IAI46_00650 0.87 -0.0 154,813 + +1.3 154,813 + -0.5 154,933 - +1.3 155,234 + +0.2 155,234 + -0.1 155,322 + IAI46_00665 0.57 +1.1 155,396 + +1.3 155,416 + +0.5 155,416 + -1.0 155,543 + +0.6 155,551 + -0.4 155,551 + -0.7 155,551 + -0.3 155,551 + -0.0 155,551 + +0.2 155,552 - -1.2 155,552 - +0.3 155,552 - +0.4 155,558 + +1.2 155,558 + +0.3 155,558 + -0.5 155,559 - -0.4 155,727 + -0.7 155,761 + -0.5 155,761 + -0.4 155,770 + +0.3 155,771 - -0.0 155,850 - +0.2
Or see this region's nucleotide sequence