Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03845 and ABID97_RS03850 are separated by 2 nucleotides ABID97_RS03850 and ABID97_RS03855 overlap by 4 nucleotides ABID97_RS03855 and ABID97_RS03860 overlap by 4 nucleotides ABID97_RS03860 and ABID97_RS03865 are separated by 53 nucleotides
ABID97_RS03845: ABID97_RS03845 - ABC transporter substrate-binding protein, at 789,517 to 790,521
_RS03845
ABID97_RS03850: ABID97_RS03850 - ABC transporter permease, at 790,524 to 791,354
_RS03850
ABID97_RS03855: ABID97_RS03855 - ABC transporter ATP-binding protein, at 791,351 to 792,184
_RS03855
ABID97_RS03860: ABID97_RS03860 - oxalurate catabolism protein HpxZ, at 792,181 to 792,561
_RS03860
ABID97_RS03865: ABID97_RS03865 - BMP family ABC transporter substrate-binding protein, at 792,615 to 793,733
_RS03865
Position (kb) 791
792
793 Strain fitness (log2 ratio) -1
0
1 at 790.396 kb on + strand, within ABID97_RS03845 at 790.397 kb on - strand, within ABID97_RS03845 at 790.405 kb on + strand, within ABID97_RS03845 at 790.405 kb on + strand, within ABID97_RS03845 at 791.260 kb on - strand, within ABID97_RS03850 at 791.651 kb on + strand, within ABID97_RS03855 at 792.338 kb on - strand, within ABID97_RS03860 at 792.424 kb on + strand, within ABID97_RS03860 at 792.424 kb on + strand, within ABID97_RS03860 at 792.425 kb on - strand, within ABID97_RS03860 at 792.741 kb on + strand, within ABID97_RS03865 at 792.742 kb on - strand, within ABID97_RS03865 at 792.742 kb on - strand, within ABID97_RS03865 at 792.769 kb on - strand, within ABID97_RS03865 at 792.966 kb on + strand, within ABID97_RS03865 at 793.047 kb on + strand, within ABID97_RS03865
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 790,396 + ABID97_RS03845 0.87 -0.2 790,397 - ABID97_RS03845 0.88 +0.9 790,405 + ABID97_RS03845 0.88 -0.1 790,405 + ABID97_RS03845 0.88 +0.7 791,260 - ABID97_RS03850 0.89 +0.2 791,651 + ABID97_RS03855 0.36 +0.2 792,338 - ABID97_RS03860 0.41 +1.3 792,424 + ABID97_RS03860 0.64 -0.6 792,424 + ABID97_RS03860 0.64 +0.2 792,425 - ABID97_RS03860 0.64 +1.4 792,741 + ABID97_RS03865 0.11 -0.8 792,742 - ABID97_RS03865 0.11 +0.4 792,742 - ABID97_RS03865 0.11 +0.2 792,769 - ABID97_RS03865 0.14 +0.3 792,966 + ABID97_RS03865 0.31 +0.4 793,047 + ABID97_RS03865 0.39 +0.2
Or see this region's nucleotide sequence