Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24790 and IAI46_24795 are separated by 125 nucleotides IAI46_24795 and IAI46_24800 are separated by 0 nucleotides IAI46_24800 and IAI46_24805 are separated by 3 nucleotides
IAI46_24790: IAI46_24790 - glycosyltransferase family 9 protein, at 5,291,667 to 5,292,680
_24790
IAI46_24795: IAI46_24795 - lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase, at 5,292,806 to 5,294,083
_24795
IAI46_24800: IAI46_24800 - glycosyltransferase family 2 protein, at 5,294,084 to 5,294,857
_24800
IAI46_24805: IAI46_24805 - pantetheine-phosphate adenylyltransferase, at 5,294,861 to 5,295,346
_24805
Position (kb) 5292
5293
5294
5295 Strain fitness (log2 ratio) -1
0
1
2 at 5291.806 kb on + strand, within IAI46_24790 at 5291.807 kb on + strand, within IAI46_24790 at 5291.808 kb on - strand, within IAI46_24790 at 5291.808 kb on - strand, within IAI46_24790 at 5291.813 kb on + strand, within IAI46_24790 at 5291.814 kb on - strand, within IAI46_24790 at 5291.872 kb on - strand, within IAI46_24790 at 5291.889 kb on + strand, within IAI46_24790 at 5291.889 kb on + strand, within IAI46_24790 at 5291.890 kb on - strand, within IAI46_24790 at 5291.890 kb on - strand, within IAI46_24790 at 5291.915 kb on - strand, within IAI46_24790 at 5292.045 kb on + strand, within IAI46_24790 at 5292.045 kb on + strand, within IAI46_24790 at 5292.046 kb on - strand, within IAI46_24790 at 5292.057 kb on - strand, within IAI46_24790 at 5292.067 kb on + strand, within IAI46_24790 at 5292.067 kb on + strand, within IAI46_24790 at 5292.068 kb on - strand, within IAI46_24790 at 5292.092 kb on + strand, within IAI46_24790 at 5292.110 kb on + strand, within IAI46_24790 at 5292.111 kb on - strand, within IAI46_24790 at 5292.254 kb on + strand, within IAI46_24790 at 5292.254 kb on + strand, within IAI46_24790 at 5292.255 kb on - strand, within IAI46_24790 at 5292.255 kb on - strand, within IAI46_24790 at 5292.255 kb on - strand, within IAI46_24790 at 5292.261 kb on + strand, within IAI46_24790 at 5292.308 kb on + strand, within IAI46_24790 at 5292.338 kb on + strand, within IAI46_24790 at 5292.338 kb on + strand, within IAI46_24790 at 5292.339 kb on - strand, within IAI46_24790 at 5292.339 kb on - strand, within IAI46_24790 at 5292.377 kb on - strand, within IAI46_24790 at 5292.377 kb on - strand, within IAI46_24790 at 5292.377 kb on - strand, within IAI46_24790 at 5292.460 kb on + strand, within IAI46_24790 at 5292.461 kb on - strand, within IAI46_24790 at 5292.491 kb on + strand, within IAI46_24790 at 5292.509 kb on - strand, within IAI46_24790 at 5292.563 kb on + strand, within IAI46_24790 at 5292.564 kb on - strand, within IAI46_24790 at 5292.596 kb on - strand at 5292.630 kb on - strand at 5292.647 kb on + strand at 5292.648 kb on - strand at 5292.648 kb on - strand at 5292.689 kb on + strand at 5292.787 kb on + strand at 5294.081 kb on + strand at 5294.081 kb on + strand at 5294.081 kb on + strand at 5294.095 kb on + strand at 5294.321 kb on - strand, within IAI46_24800 at 5294.405 kb on - strand, within IAI46_24800 at 5294.800 kb on + strand at 5294.813 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 5,291,806 + IAI46_24790 0.14 +2.1 5,291,807 + IAI46_24790 0.14 +1.2 5,291,808 - IAI46_24790 0.14 -1.3 5,291,808 - IAI46_24790 0.14 -0.0 5,291,813 + IAI46_24790 0.14 +0.1 5,291,814 - IAI46_24790 0.14 -0.8 5,291,872 - IAI46_24790 0.20 +0.0 5,291,889 + IAI46_24790 0.22 -1.2 5,291,889 + IAI46_24790 0.22 -0.3 5,291,890 - IAI46_24790 0.22 -0.1 5,291,890 - IAI46_24790 0.22 -1.3 5,291,915 - IAI46_24790 0.24 +0.9 5,292,045 + IAI46_24790 0.37 +0.8 5,292,045 + IAI46_24790 0.37 -0.3 5,292,046 - IAI46_24790 0.37 -1.4 5,292,057 - IAI46_24790 0.38 -0.4 5,292,067 + IAI46_24790 0.39 +0.2 5,292,067 + IAI46_24790 0.39 -0.6 5,292,068 - IAI46_24790 0.40 +0.4 5,292,092 + IAI46_24790 0.42 -0.8 5,292,110 + IAI46_24790 0.44 -0.3 5,292,111 - IAI46_24790 0.44 +0.1 5,292,254 + IAI46_24790 0.58 +0.3 5,292,254 + IAI46_24790 0.58 -0.5 5,292,255 - IAI46_24790 0.58 -0.0 5,292,255 - IAI46_24790 0.58 -0.2 5,292,255 - IAI46_24790 0.58 +0.4 5,292,261 + IAI46_24790 0.59 +0.2 5,292,308 + IAI46_24790 0.63 +0.2 5,292,338 + IAI46_24790 0.66 -1.1 5,292,338 + IAI46_24790 0.66 +0.1 5,292,339 - IAI46_24790 0.66 +2.0 5,292,339 - IAI46_24790 0.66 +0.3 5,292,377 - IAI46_24790 0.70 -0.1 5,292,377 - IAI46_24790 0.70 -0.1 5,292,377 - IAI46_24790 0.70 +0.6 5,292,460 + IAI46_24790 0.78 +0.4 5,292,461 - IAI46_24790 0.78 +0.2 5,292,491 + IAI46_24790 0.81 +2.2 5,292,509 - IAI46_24790 0.83 -0.2 5,292,563 + IAI46_24790 0.88 +1.4 5,292,564 - IAI46_24790 0.88 -0.5 5,292,596 - +0.4 5,292,630 - +0.0 5,292,647 + -0.2 5,292,648 - +0.6 5,292,648 - -0.5 5,292,689 + +0.1 5,292,787 + +0.9 5,294,081 + -0.2 5,294,081 + +1.7 5,294,081 + +0.4 5,294,095 + +1.8 5,294,321 - IAI46_24800 0.31 +0.4 5,294,405 - IAI46_24800 0.41 +0.4 5,294,800 + +0.8 5,294,813 + +0.8
Or see this region's nucleotide sequence