Strain Fitness in Serratia liquefaciens MT49 around IAI46_23940

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
5,095,113	+		IAI46_23935	0.55	+0.1
5,095,113	+		IAI46_23935	0.55	-0.7
5,095,137	+		IAI46_23935	0.56	+1.2
5,095,137	+		IAI46_23935	0.56	+0.2
5,095,137	+		IAI46_23935	0.56	-1.2
5,095,138	-		IAI46_23935	0.56	-0.9
5,095,140	+		IAI46_23935	0.56	+0.2
5,095,140	+		IAI46_23935	0.56	+0.2
5,095,141	-		IAI46_23935	0.56	-0.1
5,095,141	-		IAI46_23935	0.56	+0.7
5,095,141	-		IAI46_23935	0.56	+0.2
5,095,243	+		IAI46_23935	0.62	+0.3
5,095,243	+		IAI46_23935	0.62	+0.1
5,095,244	-		IAI46_23935	0.62	+0.4
5,095,244	-		IAI46_23935	0.62	-0.7
5,095,244	-		IAI46_23935	0.62	-1.1
5,095,288	+		IAI46_23935	0.64	-0.3
5,095,289	-		IAI46_23935	0.64	+0.5
5,095,289	-		IAI46_23935	0.64	+0.5
5,095,289	-		IAI46_23935	0.64	-0.0
5,095,289	-		IAI46_23935	0.64	+1.2
5,095,337	+		IAI46_23935	0.66	-1.1
5,095,337	+		IAI46_23935	0.66	-0.1
5,095,337	+		IAI46_23935	0.66	+0.7
5,095,337	+		IAI46_23935	0.66	+0.3
5,095,338	-		IAI46_23935	0.66	-0.1
5,095,338	-		IAI46_23935	0.66	+0.7
5,095,338	-		IAI46_23935	0.66	+0.5
5,095,338	-		IAI46_23935	0.66	-0.4
5,095,338	-		IAI46_23935	0.66	+0.2
5,095,342	+		IAI46_23935	0.67	+0.7
5,095,342	+		IAI46_23935	0.67	+0.7
5,095,342	+		IAI46_23935	0.67	-0.7
5,095,343	-		IAI46_23935	0.67	-0.9
5,095,343	-		IAI46_23935	0.67	+0.4
5,095,343	-		IAI46_23935	0.67	-0.7
5,095,344	+		IAI46_23935	0.67	+0.5
5,095,344	+		IAI46_23935	0.67	-0.6
5,095,344	+		IAI46_23935	0.67	-0.1
5,095,344	+		IAI46_23935	0.67	+0.4
5,095,345	-		IAI46_23935	0.67	-0.5
5,095,345	-		IAI46_23935	0.67	+0.7
5,095,345	-		IAI46_23935	0.67	+0.4
5,095,353	+		IAI46_23935	0.67	+1.9
5,095,354	-		IAI46_23935	0.67	+0.0
5,095,357	+		IAI46_23935	0.67	-0.0
5,095,357	+		IAI46_23935	0.67	+0.0
5,095,358	-		IAI46_23935	0.67	-0.8
5,095,358	-		IAI46_23935	0.67	+0.7
5,095,358	-		IAI46_23935	0.67	+0.3
5,095,358	-		IAI46_23935	0.67	+0.6
5,095,446	+		IAI46_23935	0.72	-0.3
5,095,545	+		IAI46_23935	0.77	+0.1
5,095,545	+		IAI46_23935	0.77	+0.8
5,095,545	+		IAI46_23935	0.77	+0.7
5,095,545	+		IAI46_23935	0.77	-0.6
5,095,599	+		IAI46_23935	0.80	+0.1
5,095,599	+		IAI46_23935	0.80	+0.7
5,095,599	+		IAI46_23935	0.80	+0.3
5,095,600	-		IAI46_23935	0.80	-0.9
5,095,600	-		IAI46_23935	0.80	-0.1
5,095,680	+		IAI46_23935	0.84	+0.1
5,095,680	+		IAI46_23935	0.84	+1.5
5,095,680	+		IAI46_23935	0.84	+0.6
5,095,680	+		IAI46_23935	0.84	-0.8
5,095,680	+		IAI46_23935	0.84	-0.8
5,095,681	-		IAI46_23935	0.84	+0.1
5,095,707	-		IAI46_23935	0.85	+0.0
5,095,747	+		IAI46_23935	0.87	+0.0
5,095,782	+		IAI46_23935	0.89	+0.6
5,095,782	+		IAI46_23935	0.89	+0.9
5,095,782	+		IAI46_23935	0.89	-0.1
5,095,783	-		IAI46_23935	0.89	-1.0
5,095,783	-		IAI46_23935	0.89	-1.1
5,095,783	-		IAI46_23935	0.89	+0.1
5,095,784	+		IAI46_23935	0.89	-0.0
5,095,784	+		IAI46_23935	0.89	+0.3
5,095,784	+		IAI46_23935	0.89	-0.9
5,095,827	+				-0.2
5,095,841	-				+0.1
5,095,930	-				+0.3
5,095,936	+				+0.4
5,095,936	+				+1.0
5,095,959	+				+0.3
5,095,960	-				+0.2
5,095,960	-				+0.6
5,096,024	+				-0.5
5,096,024	+				+0.0
5,096,024	+				+0.1
5,096,024	+				-1.1
5,096,024	+				+0.6
5,096,024	+				+0.3
5,096,024	+				-0.3
5,096,025	-				-0.6
5,096,025	-				-0.1
5,096,025	-				+0.0
5,096,025	-				-1.0
5,096,028	+				+0.2
5,096,028	+				+0.2
5,096,028	+				-0.9
5,096,028	+				+0.7
5,096,028	+				-0.1
5,096,044	+				+0.4
5,096,133	-				-0.3
5,096,339	+		IAI46_23940	0.15	+0.5
5,096,340	-		IAI46_23940	0.15	+0.7
5,096,488	-		IAI46_23940	0.22	+0.2
5,096,520	+		IAI46_23940	0.24	+0.8
5,096,520	+		IAI46_23940	0.24	-1.9
5,096,520	+		IAI46_23940	0.24	+0.1
5,096,520	+		IAI46_23940	0.24	+0.7
5,096,521	-		IAI46_23940	0.24	+0.4
5,096,521	-		IAI46_23940	0.24	-0.6
5,096,528	+		IAI46_23940	0.24	-0.4
5,096,528	+		IAI46_23940	0.24	-0.2
5,096,529	-		IAI46_23940	0.24	-0.3
5,096,529	-		IAI46_23940	0.24	+0.2
5,096,529	-		IAI46_23940	0.24	-0.0
5,096,531	+		IAI46_23940	0.24	+0.9
5,096,531	+		IAI46_23940	0.24	+0.7
5,096,532	-		IAI46_23940	0.24	+0.3
5,096,646	-		IAI46_23940	0.29	-0.3
5,096,651	+		IAI46_23940	0.30	+0.2
5,096,651	+		IAI46_23940	0.30	+0.9
5,096,651	+		IAI46_23940	0.30	+0.1
5,096,651	+		IAI46_23940	0.30	-0.6
5,096,651	+		IAI46_23940	0.30	-0.7
5,096,652	-		IAI46_23940	0.30	-1.0
5,096,652	-		IAI46_23940	0.30	+0.2
5,096,652	-		IAI46_23940	0.30	+0.2
5,096,652	-		IAI46_23940	0.30	-0.1
5,096,652	-		IAI46_23940	0.30	-0.1
5,096,684	+		IAI46_23940	0.31	+0.5
5,096,684	+		IAI46_23940	0.31	+0.4
5,096,684	+		IAI46_23940	0.31	+1.9
5,096,685	-		IAI46_23940	0.31	-0.4
5,096,688	+		IAI46_23940	0.31	-1.6
5,096,714	+		IAI46_23940	0.33	+0.5
5,096,714	+		IAI46_23940	0.33	-2.8
5,096,714	+		IAI46_23940	0.33	+1.7
5,096,715	-		IAI46_23940	0.33	+0.2
5,096,715	-		IAI46_23940	0.33	+0.2
5,096,715	-		IAI46_23940	0.33	-0.8
5,096,715	-		IAI46_23940	0.33	+0.5
5,096,715	-		IAI46_23940	0.33	+0.5
5,096,718	+		IAI46_23940	0.33	+0.1
5,096,718	+		IAI46_23940	0.33	+0.3
5,096,718	+		IAI46_23940	0.33	+0.9
5,096,719	-		IAI46_23940	0.33	+0.4
5,096,719	-		IAI46_23940	0.33	+1.3
5,096,719	-		IAI46_23940	0.33	+0.7
5,096,753	+		IAI46_23940	0.34	-0.1
5,096,754	-		IAI46_23940	0.34	-0.0
5,096,866	-		IAI46_23940	0.40	+0.2
5,096,866	-		IAI46_23940	0.40	+0.4
5,096,866	-		IAI46_23940	0.40	+1.2
5,096,867	+		IAI46_23940	0.40	-0.0
5,096,909	+		IAI46_23940	0.41	+0.6
5,096,945	+		IAI46_23940	0.43	+1.3
5,096,945	+		IAI46_23940	0.43	+0.3
5,096,954	+		IAI46_23940	0.44	+1.1
5,096,955	-		IAI46_23940	0.44	+1.1
5,096,955	-		IAI46_23940	0.44	-0.8
5,096,955	-		IAI46_23940	0.44	-0.4
5,096,955	-		IAI46_23940	0.44	-0.2
5,096,992	+		IAI46_23940	0.45	-0.4
5,096,992	+		IAI46_23940	0.45	+0.4
5,096,992	+		IAI46_23940	0.45	+0.9
5,096,993	-		IAI46_23940	0.45	-0.1
5,096,993	-		IAI46_23940	0.45	+1.3
5,096,993	-		IAI46_23940	0.45	+1.9
5,096,993	-		IAI46_23940	0.45	-0.1
5,097,015	-		IAI46_23940	0.46	+0.1
5,097,024	+		IAI46_23940	0.47	-0.1
5,097,024	+		IAI46_23940	0.47	+0.3
5,097,024	+		IAI46_23940	0.47	+0.4
5,097,025	-		IAI46_23940	0.47	+1.4
5,097,025	-		IAI46_23940	0.47	-0.3
5,097,025	-		IAI46_23940	0.47	+0.9
5,097,035	+		IAI46_23940	0.47	+0.9
5,097,039	+		IAI46_23940	0.47	-1.4
5,097,039	+		IAI46_23940	0.47	-0.2
5,097,040	-		IAI46_23940	0.47	+0.6
5,097,040	-		IAI46_23940	0.47	+0.2
5,097,059	+		IAI46_23940	0.48	+0.1
5,097,059	+		IAI46_23940	0.48	-0.5
5,097,059	+		IAI46_23940	0.48	-1.1
5,097,059	+		IAI46_23940	0.48	-0.9
5,097,060	-		IAI46_23940	0.48	-0.6
5,097,063	+		IAI46_23940	0.49	+1.5
5,097,065	+		IAI46_23940	0.49	+0.2
5,097,065	+		IAI46_23940	0.49	-0.0
5,097,065	+		IAI46_23940	0.49	+0.5
5,097,065	+		IAI46_23940	0.49	+0.0
5,097,066	-		IAI46_23940	0.49	+0.9
5,097,066	-		IAI46_23940	0.49	+0.2
5,097,066	-		IAI46_23940	0.49	+0.1
5,097,066	-		IAI46_23940	0.49	-0.4
5,097,066	-		IAI46_23940	0.49	+0.9
5,097,066	-		IAI46_23940	0.49	+0.5
5,097,066	-		IAI46_23940	0.49	-1.1
5,097,075	+		IAI46_23940	0.49	-0.2
5,097,076	-		IAI46_23940	0.49	-0.5
5,097,113	+		IAI46_23940	0.51	+0.3
5,097,114	-		IAI46_23940	0.51	+0.1
5,097,114	-		IAI46_23940	0.51	+0.5
5,097,119	+		IAI46_23940	0.51	-0.7
5,097,119	+		IAI46_23940	0.51	+0.1
5,097,152	+		IAI46_23940	0.53	-0.7
5,097,152	+		IAI46_23940	0.53	+0.3
5,097,198	+		IAI46_23940	0.55	+0.7
5,097,199	-		IAI46_23940	0.55	-0.6
5,097,234	+		IAI46_23940	0.56	+1.1
5,097,235	-		IAI46_23940	0.56	+0.3
5,097,280	+		IAI46_23940	0.58	-0.8
5,097,280	+		IAI46_23940	0.58	+0.5
5,097,365	+		IAI46_23940	0.62	-0.4
5,097,365	+		IAI46_23940	0.62	+0.1
5,097,366	-		IAI46_23940	0.62	-0.2
5,097,395	+		IAI46_23940	0.64	+1.2
5,097,396	-		IAI46_23940	0.64	-0.3
5,097,396	-		IAI46_23940	0.64	-0.6
5,097,452	+		IAI46_23940	0.66	+0.5
5,097,452	+		IAI46_23940	0.66	-0.2
5,097,452	+		IAI46_23940	0.66	+1.0
5,097,452	+		IAI46_23940	0.66	+0.2
5,097,453	-		IAI46_23940	0.66	+0.2
5,097,453	-		IAI46_23940	0.66	-0.1
5,097,453	-		IAI46_23940	0.66	+0.2
5,097,453	-		IAI46_23940	0.66	-1.9
5,097,457	-		IAI46_23940	0.67	-0.4
5,097,508	+		IAI46_23940	0.69	+1.0
5,097,509	-		IAI46_23940	0.69	-0.4
5,097,509	-		IAI46_23940	0.69	-0.6
5,097,572	+		IAI46_23940	0.72	-0.2
5,097,572	+		IAI46_23940	0.72	+0.2
5,097,621	-		IAI46_23940	0.74	+1.3
5,097,627	-		IAI46_23940	0.74	+1.6
5,097,824	+		IAI46_23940	0.83	-0.3
5,097,825	-		IAI46_23940	0.83	+0.7
5,097,825	-		IAI46_23940	0.83	+0.3
5,098,181	-				+3.7
5,098,181	-				+0.5
5,098,181	-				+1.6
5,098,188	+				+0.3
5,098,188	+				-0.3
5,098,188	+				+2.1
5,098,188	+				+1.9
5,098,188	+				-0.7
5,098,188	+				+0.8
5,098,188	+				+0.4
5,098,188	+				+1.0
5,098,189	-				+1.0
5,098,189	-				-1.0
5,098,189	-				+0.4
5,098,189	-				+0.4
5,098,189	-				+0.3
5,098,189	-				+0.7
5,098,206	+				-2.3
5,098,219	+				-1.3
5,098,220	-				+0.7
5,098,220	-				+0.8
5,098,222	-				-0.2
5,098,270	+				-0.2
5,098,271	-				-1.2
5,098,299	-				-1.7
5,098,299	-				-0.3
5,098,341	+				-0.3
5,098,342	-				+0.4
5,098,352	+				-0.1
5,098,352	+				-0.2
5,098,353	-				+1.0
5,098,362	+				+0.9
5,098,403	+				-0.4
5,098,403	+				+0.1
5,098,403	+				-0.3
5,098,404	-				+0.9
5,098,404	-				-1.2
5,098,447	+				+0.1
5,098,447	+				-0.0
5,098,448	-				-2.3
5,098,448	-				+1.1
5,098,448	-				-0.5
5,098,453	+				-0.0
5,098,453	+				-0.2
5,098,453	+				-0.2
5,098,453	+				+0.4
5,098,454	-				-1.0
5,098,454	-				+0.3
5,098,454	-				+0.2
5,098,457	+				+0.4
5,098,457	+				-0.1
5,098,457	+				+0.6
5,098,457	+				+1.0
5,098,457	+				+0.3
5,098,457	+				-0.0
5,098,457	+				-1.0
5,098,458	-				-0.0
5,098,458	-				-0.9
5,098,458	-				+0.0
5,098,458	-				+0.7
5,098,458	-				+0.4
5,098,485	-				-0.1
5,098,503	+				+0.8
5,098,504	-				-0.8
5,098,504	-				+0.0
5,098,595	+				+0.6
5,098,596	-				+0.3
5,098,675	-				-1.5
5,098,675	-				+1.2