Strain Fitness in Serratia liquefaciens MT49 around IAI46_21595

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
4,582,483	+		IAI46_21590	0.28	-0.1
4,582,483	+		IAI46_21590	0.28	-0.5
4,582,484	-		IAI46_21590	0.28	+0.0
4,582,521	+		IAI46_21590	0.31	+0.6
4,582,714	-		IAI46_21590	0.48	+0.4
4,582,723	+		IAI46_21590	0.49	+0.0
4,582,724	-		IAI46_21590	0.49	-0.4
4,582,746	-		IAI46_21590	0.51	+1.0
4,582,761	+		IAI46_21590	0.52	+1.2
4,582,867	-		IAI46_21590	0.61	+0.3
4,582,967	-		IAI46_21590	0.70	-0.2
4,583,002	-		IAI46_21590	0.73	-0.1
4,583,007	+		IAI46_21590	0.74	+0.8
4,583,029	+		IAI46_21590	0.76	-0.4
4,583,029	+		IAI46_21590	0.76	-0.0
4,583,030	-		IAI46_21590	0.76	+1.0
4,583,070	-		IAI46_21590	0.79	+0.8
4,583,134	+		IAI46_21590	0.85	-1.4
4,583,134	+		IAI46_21590	0.85	+0.1
4,583,211	+				+1.7
4,583,212	-				+0.4
4,583,218	-				+0.7
4,583,218	-				-0.2
4,583,254	-				-0.3
4,583,273	-				+0.8
4,583,302	+				+0.7
4,583,360	-				-0.2
4,583,467	-				+0.5
4,583,539	-				+0.5
4,583,542	-				+0.8
4,583,571	+				+2.4
4,583,721	-		IAI46_21595	0.12	+0.8
4,583,757	+		IAI46_21595	0.14	-0.9
4,583,758	-		IAI46_21595	0.14	+0.3
4,583,777	+		IAI46_21595	0.15	+1.0
4,583,777	+		IAI46_21595	0.15	-0.1
4,583,777	+		IAI46_21595	0.15	-0.5
4,583,777	+		IAI46_21595	0.15	-0.0
4,583,778	-		IAI46_21595	0.15	+1.0
4,583,968	-		IAI46_21595	0.24	+0.6
4,584,198	+		IAI46_21595	0.34	-0.1
4,584,232	+		IAI46_21595	0.36	+0.4
4,584,235	+		IAI46_21595	0.36	-0.1
4,584,236	-		IAI46_21595	0.36	+0.3
4,584,236	-		IAI46_21595	0.36	+1.3
4,584,280	+		IAI46_21595	0.38	+0.8
4,584,280	+		IAI46_21595	0.38	+0.1
4,584,281	-		IAI46_21595	0.38	+0.2
4,584,355	+		IAI46_21595	0.42	-1.2
4,584,356	-		IAI46_21595	0.42	-0.5
4,584,357	+		IAI46_21595	0.42	+1.1
4,584,357	+		IAI46_21595	0.42	+0.3
4,584,357	+		IAI46_21595	0.42	-1.1
4,584,358	-		IAI46_21595	0.42	+0.5
4,584,397	+		IAI46_21595	0.44	+0.3
4,584,398	-		IAI46_21595	0.44	-0.3
4,584,413	-		IAI46_21595	0.44	+0.2
4,584,468	+		IAI46_21595	0.47	-0.3
4,584,468	+		IAI46_21595	0.47	-1.1
4,584,469	-		IAI46_21595	0.47	-0.1
4,584,469	-		IAI46_21595	0.47	+0.2
4,584,518	-		IAI46_21595	0.49	-1.0
4,584,620	-		IAI46_21595	0.54	+0.4
4,584,633	+		IAI46_21595	0.55	+0.2
4,584,633	+		IAI46_21595	0.55	+0.5
4,584,642	+		IAI46_21595	0.55	-0.2
4,584,643	-		IAI46_21595	0.55	+0.6
4,584,661	+		IAI46_21595	0.56	+0.5
4,584,662	-		IAI46_21595	0.56	-0.7
4,584,704	-		IAI46_21595	0.58	-0.3
4,584,704	-		IAI46_21595	0.58	+0.1
4,584,720	+		IAI46_21595	0.59	+0.3
4,584,817	+		IAI46_21595	0.63	+0.2
4,584,817	+		IAI46_21595	0.63	-1.0
4,584,817	+		IAI46_21595	0.63	+0.6
4,584,818	-		IAI46_21595	0.63	+0.3
4,584,850	+		IAI46_21595	0.65	+0.7
4,584,850	+		IAI46_21595	0.65	-1.1
4,584,850	+		IAI46_21595	0.65	+0.4
4,584,850	+		IAI46_21595	0.65	-0.6
4,584,850	+		IAI46_21595	0.65	+0.7
4,584,851	-		IAI46_21595	0.65	+0.0
4,584,851	-		IAI46_21595	0.65	+0.0
4,584,851	-		IAI46_21595	0.65	+0.1
4,584,913	+		IAI46_21595	0.68	-0.3
4,584,982	-		IAI46_21595	0.71	-1.8
4,584,982	-		IAI46_21595	0.71	+0.6
4,584,982	-		IAI46_21595	0.71	-0.2
4,584,982	-		IAI46_21595	0.71	+1.2
4,584,985	+		IAI46_21595	0.71	-0.3
4,584,986	-		IAI46_21595	0.71	-1.0
4,584,986	-		IAI46_21595	0.71	+1.0
4,585,042	+		IAI46_21595	0.74	+0.6
4,585,042	+		IAI46_21595	0.74	-0.2
4,585,043	-		IAI46_21595	0.74	+1.4
4,585,043	-		IAI46_21595	0.74	-1.6
4,585,043	-		IAI46_21595	0.74	+0.8
4,585,043	-		IAI46_21595	0.74	+0.6
4,585,069	+		IAI46_21595	0.75	-0.8
4,585,070	-		IAI46_21595	0.75	-1.0
4,585,070	-		IAI46_21595	0.75	+0.0
4,585,142	-		IAI46_21595	0.79	+0.8
4,585,142	-		IAI46_21595	0.79	+0.4
4,585,179	-		IAI46_21595	0.80	+0.1
4,585,187	-		IAI46_21595	0.81	-0.2
4,585,195	+		IAI46_21595	0.81	+0.2
4,585,195	+		IAI46_21595	0.81	-0.6
4,585,195	+		IAI46_21595	0.81	-0.3
4,585,195	+		IAI46_21595	0.81	-0.2
4,585,195	+		IAI46_21595	0.81	-0.4
4,585,196	-		IAI46_21595	0.81	-1.5
4,585,196	-		IAI46_21595	0.81	-0.5
4,585,196	-		IAI46_21595	0.81	+0.5
4,585,201	+		IAI46_21595	0.81	+0.8
4,585,201	+		IAI46_21595	0.81	-0.3
4,585,201	+		IAI46_21595	0.81	-0.5
4,585,201	+		IAI46_21595	0.81	+0.6
4,585,201	+		IAI46_21595	0.81	+0.7
4,585,201	+		IAI46_21595	0.81	-0.0
4,585,202	-		IAI46_21595	0.81	-0.0
4,585,202	-		IAI46_21595	0.81	+0.5
4,585,202	-		IAI46_21595	0.81	-0.7
4,585,202	-		IAI46_21595	0.81	+0.2
4,585,202	-		IAI46_21595	0.81	+0.6
4,585,203	+		IAI46_21595	0.82	-1.0
4,585,203	+		IAI46_21595	0.82	+0.9
4,585,203	+		IAI46_21595	0.82	+0.3
4,585,203	+		IAI46_21595	0.82	-0.6
4,585,206	+		IAI46_21595	0.82	+1.9
4,585,206	+		IAI46_21595	0.82	+1.0
4,585,207	-		IAI46_21595	0.82	-1.0
4,585,256	-		IAI46_21595	0.84	+0.7
4,585,270	+		IAI46_21595	0.85	+1.5
4,585,270	+		IAI46_21595	0.85	-0.4
4,585,271	-		IAI46_21595	0.85	+0.7
4,585,271	-		IAI46_21595	0.85	+1.0
4,585,271	-		IAI46_21595	0.85	-0.5
4,585,271	-		IAI46_21595	0.85	+1.7
4,585,324	+		IAI46_21595	0.87	-0.4
4,585,324	+		IAI46_21595	0.87	+0.2
4,585,324	+		IAI46_21595	0.87	+2.3
4,585,324	+		IAI46_21595	0.87	+0.1
4,585,324	+		IAI46_21595	0.87	+1.3
4,585,324	+		IAI46_21595	0.87	+0.6
4,585,324	+		IAI46_21595	0.87	-0.8
4,585,325	-		IAI46_21595	0.87	-2.1
4,585,325	-		IAI46_21595	0.87	-0.4
4,585,325	-		IAI46_21595	0.87	-0.8
4,585,366	+		IAI46_21595	0.89	+0.9
4,585,414	+				+1.0
4,585,414	+				-0.1
4,585,414	+				+1.0
4,585,415	-				+0.7
4,585,415	-				+0.5
4,585,415	-				+0.7
4,585,415	-				+0.1
4,585,416	+				+0.8
4,585,416	+				+0.8
4,585,416	+				+0.3
4,585,416	+				-0.6
4,585,416	+				+0.9
4,585,416	+				-0.8
4,585,416	+				-0.2
4,585,417	-				-0.1
4,585,428	+				+0.4
4,585,429	-				+0.7
4,585,442	-				+0.3
4,585,443	+				+0.1
4,585,443	+				+0.3
4,585,444	-				-0.0
4,585,444	-				-0.5
4,585,510	+				-0.7
4,585,511	-				+0.5
4,585,511	-				+0.0
4,585,546	+				-0.1
4,585,594	+				-0.8
4,585,595	-				-0.7
4,585,595	-				+0.7
4,585,758	+		IAI46_21600	0.15	+0.8
4,585,759	-		IAI46_21600	0.15	+0.5
4,585,786	+		IAI46_21600	0.18	-0.1
4,585,786	+		IAI46_21600	0.18	+0.0
4,585,787	-		IAI46_21600	0.18	-0.2
4,585,787	-		IAI46_21600	0.18	+0.5
4,585,792	+		IAI46_21600	0.18	+0.4
4,585,840	-		IAI46_21600	0.24	-0.1
4,585,840	-		IAI46_21600	0.24	-0.7
4,585,840	-		IAI46_21600	0.24	+0.6
4,585,910	+		IAI46_21600	0.32	+0.0
4,585,911	-		IAI46_21600	0.32	-0.4
4,585,913	+		IAI46_21600	0.32	-0.7
4,585,914	-		IAI46_21600	0.32	+0.7
4,585,914	-		IAI46_21600	0.32	+0.0
4,585,914	-		IAI46_21600	0.32	+0.2
4,585,914	-		IAI46_21600	0.32	+1.1
4,586,041	+		IAI46_21600	0.46	+0.5
4,586,042	-		IAI46_21600	0.46	+0.8
4,586,069	+		IAI46_21600	0.49	-0.7
4,586,069	+		IAI46_21600	0.49	+0.9
4,586,070	-		IAI46_21600	0.49	-0.2
4,586,070	-		IAI46_21600	0.49	+0.3
4,586,070	-		IAI46_21600	0.49	-0.2
4,586,073	+		IAI46_21600	0.50	+0.4
4,586,073	+		IAI46_21600	0.50	-0.5
4,586,073	+		IAI46_21600	0.50	-0.2
4,586,074	-		IAI46_21600	0.50	-0.6
4,586,074	-		IAI46_21600	0.50	-0.6
4,586,074	-		IAI46_21600	0.50	-0.3
4,586,146	+		IAI46_21600	0.58	+0.7
4,586,162	+		IAI46_21600	0.60	-0.0
4,586,229	+		IAI46_21600	0.67	+0.9
4,586,325	+		IAI46_21600	0.78	+0.5
4,586,326	-		IAI46_21600	0.78	+0.0
4,586,494	+				+0.4
4,586,494	+				-0.0
4,586,494	+				+0.8
4,586,495	-				+0.4
4,586,495	-				-0.2
4,586,555	-				-0.4
4,586,573	+				+0.9
4,586,574	-				+1.0
4,586,574	-				+0.2
4,586,574	-				-0.9
4,586,596	-				-0.0
4,586,596	-				-0.2