Strain Fitness in Serratia liquefaciens MT49 around IAI46_17570

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
3,694,922	+		IAI46_17565	0.49	+0.7
3,694,922	+		IAI46_17565	0.49	+0.4
3,694,923	-		IAI46_17565	0.49	+0.2
3,694,923	-		IAI46_17565	0.49	+1.0
3,694,923	-		IAI46_17565	0.49	-0.1
3,694,925	-		IAI46_17565	0.49	+0.3
3,694,925	-		IAI46_17565	0.49	-0.0
3,694,925	-		IAI46_17565	0.49	+0.6
3,695,002	-		IAI46_17565	0.55	+0.2
3,695,046	+		IAI46_17565	0.58	+0.6
3,695,127	+		IAI46_17565	0.65	+0.2
3,695,138	+		IAI46_17565	0.66	-0.4
3,695,138	+		IAI46_17565	0.66	+0.3
3,695,139	-		IAI46_17565	0.66	-0.1
3,695,157	-		IAI46_17565	0.67	+0.6
3,695,226	+		IAI46_17565	0.72	+2.1
3,695,274	+		IAI46_17565	0.76	-0.2
3,695,550	+				-0.0
3,695,550	+				-0.5
3,695,550	+				+0.5
3,695,604	+				-0.4
3,695,604	+				-0.2
3,695,604	+				+0.8
3,695,624	+				-0.2
3,695,734	+				-0.3
3,695,735	-				-0.4
3,695,740	+				+1.5
3,695,789	-				-1.0
3,695,856	+				+0.9
3,695,856	+				+1.5
3,695,856	+				+0.3
3,695,856	+				+1.2
3,695,857	-				+0.4
3,695,857	-				+0.2
3,695,857	-				+0.8
3,695,857	-				+0.2
3,695,857	-				+0.8
3,695,884	-				+0.7
3,696,068	+				+0.3
3,696,068	+				+0.2
3,696,071	+				-1.7
3,696,071	+				+0.4
3,696,185	+				-0.8
3,696,185	+				-1.3
3,696,186	-				+0.7
3,696,186	-				-0.2
3,696,189	-				+0.4
3,696,274	+				+0.6
3,696,275	-				-0.6
3,696,275	-				-0.4
3,696,275	-				+0.3
3,696,275	-				+0.4
3,696,275	-				+0.3
3,696,275	-				+0.5
3,696,290	+				+0.7
3,696,290	+				+0.4
3,696,290	+				+0.5
3,696,290	+				+0.5
3,696,643	+				-0.3
3,696,672	+				+0.3
3,696,790	-		IAI46_17570	0.11	-0.5
3,696,902	+		IAI46_17570	0.12	-0.0
3,696,974	-		IAI46_17570	0.13	+0.1
3,696,976	+		IAI46_17570	0.13	-0.4
3,696,976	+		IAI46_17570	0.13	+0.9
3,696,977	-		IAI46_17570	0.13	+0.7
3,696,987	+		IAI46_17570	0.13	+0.4
3,697,034	+		IAI46_17570	0.13	+0.7
3,697,034	+		IAI46_17570	0.13	-0.9
3,697,037	+		IAI46_17570	0.14	-1.1
3,697,038	-		IAI46_17570	0.14	+0.6
3,697,077	+		IAI46_17570	0.14	+0.6
3,697,077	+		IAI46_17570	0.14	-1.1
3,697,078	-		IAI46_17570	0.14	-1.7
3,697,078	-		IAI46_17570	0.14	+0.9
3,697,083	+		IAI46_17570	0.14	-0.4
3,697,083	+		IAI46_17570	0.14	-0.2
3,697,100	-		IAI46_17570	0.14	-0.4
3,697,202	+		IAI46_17570	0.15	+0.1
3,697,202	+		IAI46_17570	0.15	+0.4
3,697,231	-		IAI46_17570	0.16	-0.8
3,697,231	-		IAI46_17570	0.16	+0.1
3,697,414	+		IAI46_17570	0.18	-0.3
3,697,542	-		IAI46_17570	0.19	+0.3
3,697,647	+		IAI46_17570	0.21	+1.4
3,697,647	+		IAI46_17570	0.21	+1.0
3,697,648	-		IAI46_17570	0.21	+0.9
3,697,770	-		IAI46_17570	0.22	+0.7
3,697,862	+		IAI46_17570	0.23	-0.0
3,697,863	-		IAI46_17570	0.23	+0.7
3,697,937	+		IAI46_17570	0.24	-1.2
3,697,993	+		IAI46_17570	0.25	+0.2
3,697,993	+		IAI46_17570	0.25	+0.2
3,697,993	+		IAI46_17570	0.25	-0.5
3,697,993	+		IAI46_17570	0.25	-0.9
3,697,994	-		IAI46_17570	0.25	-0.2
3,698,012	-		IAI46_17570	0.25	-0.6
3,698,013	+		IAI46_17570	0.25	+0.9
3,698,015	+		IAI46_17570	0.25	+0.9
3,698,015	+		IAI46_17570	0.25	-0.6
3,698,016	-		IAI46_17570	0.25	+0.1
3,698,115	+		IAI46_17570	0.26	-0.0
3,698,181	-		IAI46_17570	0.27	-0.2
3,698,201	+		IAI46_17570	0.27	-0.6
3,698,494	+		IAI46_17570	0.30	+0.1
3,698,606	+		IAI46_17570	0.32	-0.3
3,698,607	-		IAI46_17570	0.32	+0.4
3,698,607	-		IAI46_17570	0.32	+1.1
3,698,681	+		IAI46_17570	0.33	+0.7
3,698,681	+		IAI46_17570	0.33	-0.3
3,698,682	-		IAI46_17570	0.33	+0.5
3,698,789	-		IAI46_17570	0.34	+0.9
3,698,855	+		IAI46_17570	0.35	+0.2
3,698,856	-		IAI46_17570	0.35	+0.1
3,698,856	-		IAI46_17570	0.35	-0.2
3,698,856	-		IAI46_17570	0.35	-0.0
3,698,856	-		IAI46_17570	0.35	-0.4
3,698,859	-		IAI46_17570	0.35	+0.4
3,698,957	-		IAI46_17570	0.36	+1.0
3,698,995	+		IAI46_17570	0.36	-1.1
3,698,996	-		IAI46_17570	0.36	+0.7
3,698,999	+		IAI46_17570	0.36	+0.9
3,699,000	-		IAI46_17570	0.36	+0.4
3,699,000	-		IAI46_17570	0.36	+0.4
3,699,000	-		IAI46_17570	0.36	+0.1
3,699,009	+		IAI46_17570	0.36	+0.7
3,699,009	+		IAI46_17570	0.36	+0.0
3,699,034	+		IAI46_17570	0.37	-1.1
3,699,035	-		IAI46_17570	0.37	+0.3
3,699,095	+		IAI46_17570	0.37	+0.0
3,699,164	+		IAI46_17570	0.38	-0.6
3,699,164	+		IAI46_17570	0.38	-0.7
3,699,179	+		IAI46_17570	0.38	+0.8
3,699,179	+		IAI46_17570	0.38	-0.1
3,699,188	+		IAI46_17570	0.38	-0.1
3,699,224	+		IAI46_17570	0.39	-1.4
3,699,224	+		IAI46_17570	0.39	-0.4
3,699,224	+		IAI46_17570	0.39	+0.6
3,699,224	+		IAI46_17570	0.39	-1.0
3,699,225	-		IAI46_17570	0.39	-0.6
3,699,225	-		IAI46_17570	0.39	+0.4
3,699,226	+		IAI46_17570	0.39	+1.2
3,699,226	+		IAI46_17570	0.39	-1.0
3,699,226	+		IAI46_17570	0.39	+0.7
3,699,313	-		IAI46_17570	0.40	+0.4
3,699,313	-		IAI46_17570	0.40	+0.2
3,699,313	-		IAI46_17570	0.40	-0.4
3,699,313	-		IAI46_17570	0.40	+0.0
3,699,479	+		IAI46_17570	0.42	-0.2
3,699,479	+		IAI46_17570	0.42	-0.6
3,699,480	-		IAI46_17570	0.42	-0.4
3,699,507	+		IAI46_17570	0.42	+0.9
3,699,797	+		IAI46_17570	0.45	-1.1
3,699,833	-		IAI46_17570	0.46	+1.2
3,699,862	+		IAI46_17570	0.46	+1.2
3,699,862	+		IAI46_17570	0.46	-0.1
3,699,863	-		IAI46_17570	0.46	+0.7
3,699,866	+		IAI46_17570	0.46	-0.3
3,699,867	-		IAI46_17570	0.46	-0.9
3,699,867	-		IAI46_17570	0.46	-0.3
3,699,902	+		IAI46_17570	0.47	+0.5
3,699,903	-		IAI46_17570	0.47	+0.3
3,699,903	-		IAI46_17570	0.47	-0.9
3,700,049	+		IAI46_17570	0.48	+0.6
3,700,178	+		IAI46_17570	0.50	+2.2
3,700,179	-		IAI46_17570	0.50	+0.6
3,700,184	+		IAI46_17570	0.50	+0.8
3,700,237	+		IAI46_17570	0.51	+0.2
3,700,253	+		IAI46_17570	0.51	+0.7
3,700,254	-		IAI46_17570	0.51	+1.1
3,700,300	+		IAI46_17570	0.51	-0.2
3,700,309	+		IAI46_17570	0.51	+0.4
3,700,341	-		IAI46_17570	0.52	+0.6
3,700,349	+		IAI46_17570	0.52	-0.2
3,700,350	-		IAI46_17570	0.52	-1.1
3,700,364	+		IAI46_17570	0.52	-0.3
3,700,364	+		IAI46_17570	0.52	-0.4
3,700,380	+		IAI46_17570	0.52	+0.4
3,700,397	+		IAI46_17570	0.52	+1.1
3,700,397	+		IAI46_17570	0.52	+0.5
3,700,397	+		IAI46_17570	0.52	-0.9
3,700,398	-		IAI46_17570	0.52	-0.0
3,700,398	-		IAI46_17570	0.52	+0.8
3,700,398	-		IAI46_17570	0.52	+0.5
3,700,398	-		IAI46_17570	0.52	-0.8
3,700,415	+		IAI46_17570	0.53	-1.5
3,700,415	+		IAI46_17570	0.53	-0.1
3,700,416	-		IAI46_17570	0.53	+1.0
3,700,417	+		IAI46_17570	0.53	-0.6
3,700,417	+		IAI46_17570	0.53	+0.3
3,700,418	-		IAI46_17570	0.53	-0.5
3,700,477	+		IAI46_17570	0.53	+0.3
3,700,477	+		IAI46_17570	0.53	+0.0
3,700,478	-		IAI46_17570	0.53	+0.6
3,700,562	+		IAI46_17570	0.54	-1.9
3,700,600	+		IAI46_17570	0.55	+0.5
3,700,685	+		IAI46_17570	0.56	-0.3
3,700,685	+		IAI46_17570	0.56	-0.5
3,700,686	-		IAI46_17570	0.56	+0.4
3,700,686	-		IAI46_17570	0.56	+0.3
3,700,793	+		IAI46_17570	0.57	+0.1
3,701,027	+		IAI46_17570	0.60	-0.1
3,701,027	+		IAI46_17570	0.60	-0.9
3,701,028	-		IAI46_17570	0.60	+0.2
3,701,028	-		IAI46_17570	0.60	-0.7
3,701,094	+		IAI46_17570	0.60	-1.2
3,701,094	+		IAI46_17570	0.60	+0.4
3,701,176	-		IAI46_17570	0.61	-0.4
3,701,371	-		IAI46_17570	0.64	-0.5
3,701,386	+		IAI46_17570	0.64	-2.2
3,701,387	-		IAI46_17570	0.64	-0.4
3,701,393	+		IAI46_17570	0.64	+1.2
3,701,393	+		IAI46_17570	0.64	+0.2
3,701,394	-		IAI46_17570	0.64	+1.2
3,701,502	+		IAI46_17570	0.65	+0.6
3,701,502	+		IAI46_17570	0.65	+1.3
3,701,612	-		IAI46_17570	0.66	+0.2
3,701,887	-		IAI46_17570	0.70	-0.4
3,701,902	+		IAI46_17570	0.70	+1.1
3,701,902	+		IAI46_17570	0.70	-0.8
3,701,902	+		IAI46_17570	0.70	+0.2
3,701,903	-		IAI46_17570	0.70	-0.9
3,701,903	-		IAI46_17570	0.70	-1.7
3,701,903	-		IAI46_17570	0.70	+0.8
3,701,944	+		IAI46_17570	0.70	+0.2
3,701,948	+		IAI46_17570	0.70	-0.4
3,702,067	+		IAI46_17570	0.72	-0.0
3,702,067	+		IAI46_17570	0.72	+0.4
3,702,126	-		IAI46_17570	0.72	+0.9
3,702,126	-		IAI46_17570	0.72	+0.1
3,702,126	-		IAI46_17570	0.72	-0.1
3,702,126	-		IAI46_17570	0.72	-0.0
3,702,165	-		IAI46_17570	0.73	-0.9
3,702,165	-		IAI46_17570	0.73	+0.7
3,702,267	-		IAI46_17570	0.74	-0.3
3,702,267	-		IAI46_17570	0.74	+0.5
3,702,267	-		IAI46_17570	0.74	-0.4
3,702,293	+		IAI46_17570	0.74	-1.0
3,702,350	+		IAI46_17570	0.75	+0.7
3,702,419	+		IAI46_17570	0.76	+0.6
3,702,581	+		IAI46_17570	0.78	-0.0
3,702,628	+		IAI46_17570	0.78	+2.7
3,702,628	+		IAI46_17570	0.78	+1.0
3,702,629	-		IAI46_17570	0.78	+0.8
3,703,025	-		IAI46_17570	0.83	+0.4
3,703,044	+		IAI46_17570	0.83	-0.3
3,703,044	+		IAI46_17570	0.83	-0.7
3,703,115	-		IAI46_17570	0.84	+0.7
3,703,134	-		IAI46_17570	0.84	+1.2
3,703,355	+		IAI46_17570	0.87	+1.1
3,703,356	-		IAI46_17570	0.87	-1.3
3,703,403	+		IAI46_17570	0.87	-2.0
3,703,484	+		IAI46_17570	0.88	-0.4
3,703,484	+		IAI46_17570	0.88	+1.1
3,703,485	-		IAI46_17570	0.88	-0.1
3,703,485	-		IAI46_17570	0.88	-1.4
3,703,579	+		IAI46_17570	0.89	+1.7
3,703,580	-		IAI46_17570	0.89	-1.6
3,703,773	-				-1.0
3,703,823	-				+0.8
3,703,986	-				+0.0
3,704,030	+				-0.5
3,704,031	-				-0.2
3,704,031	-				-0.1
3,704,032	+				+0.1
3,704,032	+				+0.6
3,704,033	-				+0.7
3,704,033	-				-0.0
3,704,080	+				-0.1
3,704,157	-				+0.8
3,704,171	+				-0.5
3,704,171	+				+1.0
3,704,171	+				-0.5
3,704,171	+				-0.1
3,704,172	-				-0.8
3,704,172	-				-0.4
3,704,172	-				-0.9
3,704,193	-				-0.3
3,704,193	-				+0.5
3,704,193	-				+0.6
3,704,235	-				+0.7
3,704,259	-				-0.6
3,704,356	+				-1.2
3,704,356	+				+0.9
3,704,356	+				+0.5
3,704,357	-				-0.1
3,704,357	-				+0.5
3,704,357	-				-0.6
3,704,371	+				+0.2
3,704,458	-				-0.5
3,704,467	-				+0.7
3,704,467	-				+0.6
3,704,511	-				+0.5
3,704,549	+				+0.3
3,704,737	+				-0.2
3,704,737	+				+0.3
3,704,748	+				+1.1
3,704,759	-				-1.6
3,704,759	-				+0.4
3,704,839	+		IAI46_17575	0.26	+0.1
3,704,878	+		IAI46_17575	0.39	-0.4
3,704,879	-		IAI46_17575	0.39	+0.4
3,704,879	-		IAI46_17575	0.39	+0.2
3,704,882	-		IAI46_17575	0.40	+0.5
3,704,882	-		IAI46_17575	0.40	-0.8
3,704,954	+		IAI46_17575	0.63	+0.5
3,704,956	+		IAI46_17575	0.64	-1.1
3,704,956	+		IAI46_17575	0.64	+0.2
3,704,956	+		IAI46_17575	0.64	-0.3
3,704,957	-		IAI46_17575	0.64	+0.1
3,704,957	-		IAI46_17575	0.64	-0.0
3,704,957	-		IAI46_17575	0.64	-0.1
3,704,957	-		IAI46_17575	0.64	+0.5
3,705,056	+				-0.6
3,705,056	+				-0.3
3,705,057	-				-0.2
3,705,071	+				-1.3
3,705,072	-				-0.7
3,705,072	-				-0.7
3,705,105	+				-0.6
3,705,105	+				+0.9
3,705,106	-				+0.5
3,705,106	-				-0.4
3,705,106	-				-0.6
3,705,106	-				-0.3
3,705,109	+				+0.3
3,705,109	+				-0.7
3,705,109	+				-0.4
3,705,110	-				+0.1
3,705,110	-				+0.6
3,705,112	-				+0.1
3,705,112	-				-0.3