Strain Fitness in Serratia liquefaciens MT49 around IAI46_05445

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
1,172,130	+		IAI46_05440	0.81	+0.2
1,172,304	-				+2.0
1,172,306	+				+1.3
1,172,306	+				-0.0
1,172,307	-				-1.5
1,172,339	+				+0.6
1,172,339	+				+0.7
1,172,360	+				+0.1
1,172,398	-				+0.8
1,172,420	+				-0.3
1,172,421	-				+0.2
1,172,421	-				-0.6
1,172,497	+				-0.3
1,172,497	+				-2.2
1,172,498	-				+1.0
1,172,526	+				+1.0
1,172,565	+				+0.1
1,172,565	+				-0.3
1,172,566	-				-0.9
1,172,585	+				-0.0
1,172,585	+				+0.5
1,172,585	+				+0.7
1,172,587	+				+0.4
1,172,587	+				+0.3
1,172,655	+				-0.6
1,172,655	+				-1.3
1,172,656	-				-0.6
1,172,656	-				-0.0
1,172,694	+				-0.2
1,172,722	+				+0.9
1,172,722	+				+0.7
1,172,722	+				-0.2
1,172,722	+				+0.0
1,172,723	-				+0.9
1,172,725	+				+0.1
1,172,770	+				+0.3
1,172,770	+				+0.8
1,172,770	+				-0.1
1,172,770	+				-1.8
1,172,771	-				-0.1
1,172,771	-				-1.2
1,172,771	-				+0.7
1,172,771	-				+0.4
1,172,774	+				+0.3
1,172,774	+				-1.2
1,172,774	+				+0.0
1,172,774	+				+0.7
1,172,775	-				+0.3
1,172,823	-				+0.3
1,172,909	+				-0.6
1,172,909	+				+0.5
1,172,910	-				+0.7
1,172,910	-				-0.2
1,172,910	-				-0.8
1,172,952	+				-0.0
1,172,953	-				+2.1
1,172,968	+				+0.6
1,172,973	+				-0.5
1,172,974	-				+0.1
1,172,974	-				-0.9
1,172,974	-				-1.8
1,172,986	-				+0.2
1,172,991	-				-1.5
1,173,020	+				+0.8
1,173,051	+				-0.8
1,173,051	+				+1.2
1,173,052	-				+0.3
1,173,052	-				-0.7
1,173,052	-				+0.0
1,173,088	-				-2.6
1,173,104	+				-1.2
1,173,104	+				+2.1
1,173,104	+				+0.7
1,173,105	-				+0.6
1,173,127	+				-0.0
1,173,128	-				+0.8
1,173,151	+				+1.5
1,173,151	+				-0.7
1,173,152	-				+0.1
1,173,152	-				-0.7
1,173,152	-				-1.2
1,173,152	-				-0.8
1,173,152	-				+1.4
1,173,375	+		IAI46_05445	0.23	-0.0
1,173,376	-		IAI46_05445	0.23	+0.4
1,173,376	-		IAI46_05445	0.23	+0.6
1,173,376	-		IAI46_05445	0.23	+0.2
1,173,381	-		IAI46_05445	0.24	+1.5
1,173,386	+		IAI46_05445	0.24	+1.2
1,173,386	+		IAI46_05445	0.24	+1.4
1,173,386	+		IAI46_05445	0.24	-0.4
1,173,430	+		IAI46_05445	0.29	-0.0
1,173,504	+		IAI46_05445	0.36	-0.3
1,173,822	+		IAI46_05445	0.66	-0.7
1,173,822	+		IAI46_05445	0.66	-1.0
1,173,822	+		IAI46_05445	0.66	+0.7
1,173,822	+		IAI46_05445	0.66	-0.0
1,173,823	-		IAI46_05445	0.66	+1.3
1,173,823	-		IAI46_05445	0.66	-0.1
1,173,876	+		IAI46_05445	0.71	+0.5
1,173,876	+		IAI46_05445	0.71	+0.4
1,173,876	+		IAI46_05445	0.71	-0.6
1,173,876	+		IAI46_05445	0.71	+0.0
1,173,877	-		IAI46_05445	0.71	+0.1
1,173,877	-		IAI46_05445	0.71	+0.1
1,173,877	-		IAI46_05445	0.71	-1.0
1,173,893	-		IAI46_05445	0.72	-0.1
1,173,973	+		IAI46_05445	0.80	+1.1
1,173,974	-		IAI46_05445	0.80	+0.5
1,173,990	+		IAI46_05445	0.82	+0.4
1,173,990	+		IAI46_05445	0.82	+0.4
1,173,991	-		IAI46_05445	0.82	+1.0
1,174,016	+		IAI46_05445	0.84	+0.3
1,174,016	+		IAI46_05445	0.84	+0.5
1,174,016	+		IAI46_05445	0.84	+0.0
1,174,017	-		IAI46_05445	0.84	-0.3
1,174,017	-		IAI46_05445	0.84	+0.0
1,174,017	-		IAI46_05445	0.84	-0.8
1,174,017	-		IAI46_05445	0.84	-0.1
1,174,020	+		IAI46_05445	0.84	-0.7
1,174,021	-		IAI46_05445	0.85	+0.3
1,174,157	-				+0.9
1,174,202	+				+1.0
1,174,250	-				+0.2
1,174,414	+		IAI46_05450	0.24	+0.7
1,174,414	+		IAI46_05450	0.24	+0.4
1,174,414	+		IAI46_05450	0.24	-0.0
1,174,415	-		IAI46_05450	0.24	-0.4
1,174,434	+		IAI46_05450	0.26	-0.9
1,174,434	+		IAI46_05450	0.26	+2.1
1,174,434	+		IAI46_05450	0.26	+0.4
1,174,435	-		IAI46_05450	0.26	+1.3
1,174,435	-		IAI46_05450	0.26	+0.1
1,174,435	-		IAI46_05450	0.26	+1.1
1,174,435	-		IAI46_05450	0.26	+0.6
1,174,436	+		IAI46_05450	0.27	+1.9
1,174,436	+		IAI46_05450	0.27	+0.2
1,174,437	-		IAI46_05450	0.27	+0.5
1,174,437	-		IAI46_05450	0.27	-0.9
1,174,437	-		IAI46_05450	0.27	+0.3
1,174,437	-		IAI46_05450	0.27	-0.4
1,174,437	-		IAI46_05450	0.27	+1.0
1,174,695	+		IAI46_05450	0.53	-0.9
1,174,731	+		IAI46_05450	0.57	+0.5
1,174,732	-		IAI46_05450	0.57	-0.6
1,174,773	+		IAI46_05450	0.61	-2.8
1,174,774	-		IAI46_05450	0.61	-1.8
1,174,782	+		IAI46_05450	0.62	-0.3
1,174,865	-		IAI46_05450	0.71	+0.5
1,174,865	-		IAI46_05450	0.71	+1.5
1,174,865	-		IAI46_05450	0.71	+0.8
1,174,876	+		IAI46_05450	0.72	+0.1
1,174,876	+		IAI46_05450	0.72	-1.3
1,174,877	-		IAI46_05450	0.72	+0.1
1,174,877	-		IAI46_05450	0.72	-0.2
1,174,877	-		IAI46_05450	0.72	-0.3
1,174,884	+		IAI46_05450	0.73	+0.6
1,174,884	+		IAI46_05450	0.73	-0.2
1,174,884	+		IAI46_05450	0.73	+0.9
1,174,884	+		IAI46_05450	0.73	+0.6
1,174,884	+		IAI46_05450	0.73	+1.3
1,174,885	-		IAI46_05450	0.73	+1.0
1,174,885	-		IAI46_05450	0.73	+0.5
1,174,888	+		IAI46_05450	0.73	-1.8
1,174,889	-		IAI46_05450	0.73	-0.3
1,175,029	-		IAI46_05450	0.88	-0.4
1,175,041	+		IAI46_05450	0.89	+1.3
1,175,042	-		IAI46_05450	0.89	-0.1
1,175,043	+		IAI46_05450	0.89	+0.5
1,175,043	+		IAI46_05450	0.89	-1.4
1,175,043	+		IAI46_05450	0.89	-0.7
1,175,043	+		IAI46_05450	0.89	-0.4
1,175,043	+		IAI46_05450	0.89	+0.1
1,175,043	+		IAI46_05450	0.89	-0.0
1,175,043	+		IAI46_05450	0.89	+1.1
1,175,044	-		IAI46_05450	0.89	-0.3
1,175,044	-		IAI46_05450	0.89	-1.0
1,175,044	-		IAI46_05450	0.89	-1.5
1,175,044	-		IAI46_05450	0.89	+0.0
1,175,050	+				-0.3
1,175,050	+				+0.7
1,175,087	+				+0.1
1,175,100	+				+0.5
1,175,100	+				+1.1
1,175,101	-				+0.7
1,175,101	-				+0.5
1,175,103	+				-0.1
1,175,103	+				+0.3
1,175,104	-				+0.4
1,175,104	-				-0.2
1,175,144	-				+0.3