Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03195 and IAI46_03200 are separated by 184 nucleotides IAI46_03200 and IAI46_03205 overlap by 8 nucleotides IAI46_03205 and IAI46_03210 are separated by 43 nucleotides IAI46_03210 and IAI46_03215 are separated by 129 nucleotides
IAI46_03195: IAI46_03195 - carbamoyl-phosphate synthase large subunit, at 685,030 to 688,254
_03195
IAI46_03200: IAI46_03200 - glutathione-regulated potassium-efflux system oxidoreductase KefF, at 688,439 to 688,996
_03200
IAI46_03205: IAI46_03205 - glutathione-regulated potassium-efflux system protein KefC, at 688,989 to 690,842
_03205
IAI46_03210: IAI46_03210 - LysE family translocator, at 690,886 to 691,500
_03210
IAI46_03215: IAI46_03215 - threonine/serine exporter ThrE family protein, at 691,630 to 692,430
_03215
Position (kb) 688
689
690
691 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 688.057 kb on + strand at 688.057 kb on + strand at 688.057 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.063 kb on + strand at 688.064 kb on - strand at 688.064 kb on - strand at 688.064 kb on - strand at 688.123 kb on - strand at 688.135 kb on + strand at 688.147 kb on + strand at 688.148 kb on - strand at 688.242 kb on + strand at 688.243 kb on - strand at 688.243 kb on - strand at 688.252 kb on + strand at 688.253 kb on - strand at 688.394 kb on + strand at 688.395 kb on - strand at 688.395 kb on - strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.396 kb on + strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.397 kb on - strand at 688.407 kb on + strand at 688.407 kb on + strand at 688.408 kb on - strand at 688.408 kb on - strand at 688.408 kb on - strand at 688.450 kb on + strand at 688.451 kb on - strand at 688.517 kb on - strand, within IAI46_03200 at 688.534 kb on - strand, within IAI46_03200 at 688.544 kb on + strand, within IAI46_03200 at 688.544 kb on + strand, within IAI46_03200 at 688.544 kb on + strand, within IAI46_03200 at 688.545 kb on - strand, within IAI46_03200 at 688.614 kb on + strand, within IAI46_03200 at 688.640 kb on + strand, within IAI46_03200 at 688.700 kb on + strand, within IAI46_03200 at 688.700 kb on + strand, within IAI46_03200 at 688.700 kb on + strand, within IAI46_03200 at 688.701 kb on - strand, within IAI46_03200 at 688.701 kb on - strand, within IAI46_03200 at 688.839 kb on - strand, within IAI46_03200 at 688.847 kb on - strand, within IAI46_03200 at 688.862 kb on + strand, within IAI46_03200 at 688.862 kb on + strand, within IAI46_03200 at 688.863 kb on - strand, within IAI46_03200 at 688.863 kb on - strand, within IAI46_03200 at 688.863 kb on - strand, within IAI46_03200 at 688.876 kb on + strand, within IAI46_03200 at 688.876 kb on + strand, within IAI46_03200 at 688.877 kb on - strand, within IAI46_03200 at 688.885 kb on + strand, within IAI46_03200 at 688.926 kb on - strand, within IAI46_03200 at 688.941 kb on + strand at 688.947 kb on - strand at 688.994 kb on + strand at 689.025 kb on + strand at 689.025 kb on + strand at 689.025 kb on + strand at 689.026 kb on - strand at 689.195 kb on + strand, within IAI46_03205 at 689.195 kb on + strand, within IAI46_03205 at 689.195 kb on + strand, within IAI46_03205 at 689.249 kb on - strand, within IAI46_03205 at 689.519 kb on + strand, within IAI46_03205 at 689.519 kb on + strand, within IAI46_03205 at 689.520 kb on - strand, within IAI46_03205 at 689.520 kb on - strand, within IAI46_03205 at 689.520 kb on - strand, within IAI46_03205 at 689.520 kb on - strand, within IAI46_03205 at 689.573 kb on - strand, within IAI46_03205 at 689.578 kb on + strand, within IAI46_03205 at 689.592 kb on + strand, within IAI46_03205 at 689.593 kb on - strand, within IAI46_03205 at 689.593 kb on - strand, within IAI46_03205 at 689.593 kb on - strand, within IAI46_03205 at 689.761 kb on - strand, within IAI46_03205 at 689.784 kb on - strand, within IAI46_03205 at 689.900 kb on + strand, within IAI46_03205 at 689.901 kb on - strand, within IAI46_03205 at 690.043 kb on + strand, within IAI46_03205 at 690.229 kb on + strand, within IAI46_03205 at 690.241 kb on + strand, within IAI46_03205 at 690.242 kb on - strand, within IAI46_03205 at 690.245 kb on - strand, within IAI46_03205 at 690.259 kb on + strand, within IAI46_03205 at 690.259 kb on + strand, within IAI46_03205 at 690.260 kb on - strand, within IAI46_03205 at 690.260 kb on - strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.293 kb on + strand, within IAI46_03205 at 690.331 kb on - strand, within IAI46_03205 at 690.331 kb on - strand, within IAI46_03205 at 690.331 kb on - strand, within IAI46_03205 at 690.518 kb on - strand, within IAI46_03205 at 690.626 kb on + strand, within IAI46_03205 at 690.627 kb on - strand, within IAI46_03205 at 690.639 kb on + strand, within IAI46_03205 at 690.640 kb on - strand, within IAI46_03205 at 690.640 kb on - strand, within IAI46_03205 at 690.641 kb on + strand, within IAI46_03205 at 690.642 kb on - strand, within IAI46_03205 at 690.672 kb on - strand at 690.675 kb on + strand at 690.840 kb on + strand at 690.887 kb on + strand at 690.888 kb on - strand at 690.939 kb on + strand at 690.939 kb on + strand at 691.038 kb on + strand, within IAI46_03210 at 691.038 kb on + strand, within IAI46_03210 at 691.039 kb on - strand, within IAI46_03210 at 691.088 kb on - strand, within IAI46_03210 at 691.099 kb on + strand, within IAI46_03210 at 691.120 kb on - strand, within IAI46_03210 at 691.120 kb on - strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.149 kb on - strand, within IAI46_03210 at 691.157 kb on - strand, within IAI46_03210 at 691.157 kb on - strand, within IAI46_03210 at 691.157 kb on - strand, within IAI46_03210 at 691.259 kb on + strand, within IAI46_03210 at 691.260 kb on - strand, within IAI46_03210 at 691.274 kb on + strand, within IAI46_03210 at 691.337 kb on + strand, within IAI46_03210 at 691.526 kb on + strand at 691.527 kb on - strand at 691.539 kb on - strand at 691.559 kb on + strand at 691.559 kb on + strand at 691.559 kb on + strand at 691.579 kb on + strand at 691.580 kb on - strand at 691.592 kb on + strand at 691.593 kb on - strand at 691.593 kb on - strand at 691.601 kb on + strand at 691.601 kb on + strand at 691.601 kb on + strand at 691.601 kb on + strand at 691.602 kb on - strand at 691.602 kb on - strand at 691.633 kb on + strand at 691.633 kb on + strand at 691.633 kb on + strand at 691.648 kb on - strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 688,057 + -0.2 688,057 + -3.9 688,057 + -2.0 688,063 + -2.0 688,063 + -1.3 688,063 + -0.6 688,063 + -2.3 688,063 + -1.2 688,064 - -3.0 688,064 - -2.4 688,064 - -2.6 688,123 - -0.8 688,135 + -1.5 688,147 + -0.8 688,148 - -2.4 688,242 + +1.7 688,243 - -1.9 688,243 - -1.0 688,252 + +0.9 688,253 - +1.1 688,394 + -0.9 688,395 - +1.0 688,395 - +0.9 688,396 + -0.5 688,396 + -0.1 688,396 + -2.4 688,396 + +1.2 688,396 + -0.1 688,397 - -0.5 688,397 - +0.1 688,397 - +0.2 688,397 - +0.5 688,397 - +0.2 688,407 + +1.0 688,407 + -0.4 688,408 - -1.3 688,408 - +1.4 688,408 - -1.8 688,450 + +0.6 688,451 - +1.2 688,517 - IAI46_03200 0.14 -0.7 688,534 - IAI46_03200 0.17 +0.3 688,544 + IAI46_03200 0.19 -0.5 688,544 + IAI46_03200 0.19 +0.6 688,544 + IAI46_03200 0.19 -0.4 688,545 - IAI46_03200 0.19 -0.0 688,614 + IAI46_03200 0.31 +0.5 688,640 + IAI46_03200 0.36 -0.0 688,700 + IAI46_03200 0.47 -0.6 688,700 + IAI46_03200 0.47 +0.0 688,700 + IAI46_03200 0.47 +1.4 688,701 - IAI46_03200 0.47 -0.3 688,701 - IAI46_03200 0.47 -0.0 688,839 - IAI46_03200 0.72 -0.1 688,847 - IAI46_03200 0.73 -0.1 688,862 + IAI46_03200 0.76 -0.3 688,862 + IAI46_03200 0.76 -0.6 688,863 - IAI46_03200 0.76 -0.3 688,863 - IAI46_03200 0.76 +0.6 688,863 - IAI46_03200 0.76 +0.5 688,876 + IAI46_03200 0.78 +0.6 688,876 + IAI46_03200 0.78 +0.6 688,877 - IAI46_03200 0.78 -0.3 688,885 + IAI46_03200 0.80 +0.0 688,926 - IAI46_03200 0.87 +1.4 688,941 + -1.1 688,947 - -0.5 688,994 + -0.5 689,025 + +0.2 689,025 + +0.7 689,025 + +1.0 689,026 - -1.1 689,195 + IAI46_03205 0.11 -0.5 689,195 + IAI46_03205 0.11 -0.4 689,195 + IAI46_03205 0.11 +1.6 689,249 - IAI46_03205 0.14 -0.5 689,519 + IAI46_03205 0.29 +0.3 689,519 + IAI46_03205 0.29 +0.6 689,520 - IAI46_03205 0.29 -0.5 689,520 - IAI46_03205 0.29 +0.2 689,520 - IAI46_03205 0.29 -0.2 689,520 - IAI46_03205 0.29 -1.0 689,573 - IAI46_03205 0.31 +0.4 689,578 + IAI46_03205 0.32 -0.3 689,592 + IAI46_03205 0.33 +2.1 689,593 - IAI46_03205 0.33 -0.3 689,593 - IAI46_03205 0.33 -1.0 689,593 - IAI46_03205 0.33 -0.6 689,761 - IAI46_03205 0.42 -0.1 689,784 - IAI46_03205 0.43 -0.4 689,900 + IAI46_03205 0.49 -0.1 689,901 - IAI46_03205 0.49 +0.6 690,043 + IAI46_03205 0.57 +0.3 690,229 + IAI46_03205 0.67 +0.2 690,241 + IAI46_03205 0.68 -1.0 690,242 - IAI46_03205 0.68 +0.4 690,245 - IAI46_03205 0.68 -1.6 690,259 + IAI46_03205 0.69 -0.6 690,259 + IAI46_03205 0.69 -0.5 690,260 - IAI46_03205 0.69 -0.4 690,260 - IAI46_03205 0.69 +0.8 690,263 + IAI46_03205 0.69 +0.5 690,263 + IAI46_03205 0.69 +0.1 690,263 + IAI46_03205 0.69 +0.7 690,263 + IAI46_03205 0.69 +0.2 690,264 - IAI46_03205 0.69 +0.4 690,264 - IAI46_03205 0.69 -0.1 690,264 - IAI46_03205 0.69 -1.3 690,264 - IAI46_03205 0.69 +0.2 690,293 + IAI46_03205 0.70 +1.5 690,331 - IAI46_03205 0.72 +1.0 690,331 - IAI46_03205 0.72 +0.6 690,331 - IAI46_03205 0.72 +1.2 690,518 - IAI46_03205 0.82 -0.5 690,626 + IAI46_03205 0.88 -0.1 690,627 - IAI46_03205 0.88 -0.2 690,639 + IAI46_03205 0.89 +0.4 690,640 - IAI46_03205 0.89 -1.9 690,640 - IAI46_03205 0.89 +0.1 690,641 + IAI46_03205 0.89 +0.7 690,642 - IAI46_03205 0.89 +1.3 690,672 - +0.6 690,675 + +0.5 690,840 + -0.0 690,887 + +1.1 690,888 - +0.2 690,939 + +0.5 690,939 + +0.4 691,038 + IAI46_03210 0.25 -1.5 691,038 + IAI46_03210 0.25 +0.2 691,039 - IAI46_03210 0.25 +0.6 691,088 - IAI46_03210 0.33 -0.4 691,099 + IAI46_03210 0.35 +1.3 691,120 - IAI46_03210 0.38 +0.3 691,120 - IAI46_03210 0.38 +1.5 691,148 + IAI46_03210 0.43 -0.6 691,148 + IAI46_03210 0.43 -0.4 691,148 + IAI46_03210 0.43 +0.4 691,148 + IAI46_03210 0.43 +0.3 691,148 + IAI46_03210 0.43 +0.5 691,148 + IAI46_03210 0.43 +0.0 691,149 - IAI46_03210 0.43 -0.4 691,157 - IAI46_03210 0.44 -0.3 691,157 - IAI46_03210 0.44 -0.8 691,157 - IAI46_03210 0.44 +0.1 691,259 + IAI46_03210 0.61 +0.9 691,260 - IAI46_03210 0.61 +0.5 691,274 + IAI46_03210 0.63 +0.1 691,337 + IAI46_03210 0.73 -0.4 691,526 + +0.1 691,527 - -0.5 691,539 - +2.6 691,559 + -0.2 691,559 + -0.6 691,559 + -0.0 691,579 + +0.7 691,580 - +0.1 691,592 + -0.1 691,593 - +0.7 691,593 - +1.2 691,601 + +0.1 691,601 + -0.3 691,601 + +0.2 691,601 + -0.2 691,602 - +0.9 691,602 - +0.7 691,633 + +0.3 691,633 + -0.0 691,633 + +0.3 691,648 - -0.4 691,649 + -0.1 691,649 + +1.1 691,649 + +0.3 691,649 + +1.1 691,649 + -0.1 691,649 + +0.1 691,649 + -1.5 691,649 + -0.1 691,650 - +0.2 691,650 - +0.7 691,650 - +0.0 691,650 - +0.4 691,650 - +0.5 691,650 - -0.3
Or see this region's nucleotide sequence