Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03050 and IAI46_03055 are separated by 381 nucleotides IAI46_03055 and IAI46_03060 are separated by 150 nucleotides IAI46_03060 and IAI46_03065 are separated by 123 nucleotides
IAI46_03050: IAI46_03050 - sodium:alanine symporter family protein, at 650,619 to 652,043
_03050
IAI46_03055: IAI46_03055 - transaldolase, at 652,425 to 653,378
_03055
IAI46_03060: IAI46_03060 - molybdopterin adenylyltransferase, at 653,529 to 654,116
_03060
IAI46_03065: IAI46_03065 - MFS transporter, at 654,240 to 655,547
_03065
Position (kb) 652
653
654 Strain fitness (log2 ratio) -1
0
1
2 at 651.483 kb on + strand, within IAI46_03050 at 651.505 kb on + strand, within IAI46_03050 at 651.505 kb on + strand, within IAI46_03050 at 651.505 kb on + strand, within IAI46_03050 at 651.505 kb on + strand, within IAI46_03050 at 651.506 kb on - strand, within IAI46_03050 at 651.506 kb on - strand, within IAI46_03050 at 651.506 kb on - strand, within IAI46_03050 at 651.506 kb on - strand, within IAI46_03050 at 651.506 kb on - strand, within IAI46_03050 at 651.551 kb on - strand, within IAI46_03050 at 651.577 kb on - strand, within IAI46_03050 at 651.577 kb on - strand, within IAI46_03050 at 651.648 kb on - strand, within IAI46_03050 at 651.649 kb on + strand, within IAI46_03050 at 651.649 kb on + strand, within IAI46_03050 at 651.649 kb on + strand, within IAI46_03050 at 651.649 kb on + strand, within IAI46_03050 at 651.650 kb on - strand, within IAI46_03050 at 651.650 kb on - strand, within IAI46_03050 at 651.650 kb on - strand, within IAI46_03050 at 651.650 kb on - strand, within IAI46_03050 at 651.650 kb on - strand, within IAI46_03050 at 651.652 kb on + strand, within IAI46_03050 at 651.652 kb on + strand, within IAI46_03050 at 651.652 kb on + strand, within IAI46_03050 at 651.652 kb on + strand, within IAI46_03050 at 651.652 kb on + strand, within IAI46_03050 at 651.652 kb on + strand, within IAI46_03050 at 651.653 kb on - strand, within IAI46_03050 at 651.653 kb on - strand, within IAI46_03050 at 651.653 kb on - strand, within IAI46_03050 at 651.653 kb on - strand, within IAI46_03050 at 651.653 kb on - strand, within IAI46_03050 at 651.653 kb on - strand, within IAI46_03050 at 651.800 kb on + strand, within IAI46_03050 at 651.818 kb on + strand, within IAI46_03050 at 651.852 kb on + strand, within IAI46_03050 at 651.852 kb on + strand, within IAI46_03050 at 651.853 kb on - strand, within IAI46_03050 at 651.853 kb on - strand, within IAI46_03050 at 651.853 kb on - strand, within IAI46_03050 at 651.917 kb on + strand at 651.917 kb on + strand at 651.917 kb on + strand at 651.918 kb on - strand at 651.918 kb on - strand at 651.918 kb on - strand at 651.918 kb on - strand at 651.918 kb on - strand at 651.918 kb on - strand at 651.960 kb on - strand at 651.965 kb on - strand at 651.965 kb on - strand at 652.020 kb on + strand at 652.062 kb on - strand at 652.099 kb on + strand at 652.099 kb on + strand at 652.100 kb on - strand at 652.102 kb on - strand at 652.103 kb on + strand at 652.128 kb on + strand at 652.129 kb on - strand at 652.183 kb on + strand at 652.184 kb on - strand at 652.184 kb on - strand at 652.206 kb on + strand at 652.301 kb on - strand at 652.357 kb on + strand at 652.358 kb on - strand at 652.360 kb on + strand at 652.415 kb on + strand at 652.415 kb on + strand at 652.415 kb on + strand at 652.415 kb on + strand at 652.416 kb on - strand at 652.439 kb on - strand at 652.520 kb on + strand at 652.520 kb on + strand at 652.521 kb on - strand, within IAI46_03055 at 652.566 kb on + strand, within IAI46_03055 at 652.731 kb on + strand, within IAI46_03055 at 652.732 kb on - strand, within IAI46_03055 at 652.779 kb on + strand, within IAI46_03055 at 652.780 kb on - strand, within IAI46_03055 at 652.780 kb on - strand, within IAI46_03055 at 652.883 kb on + strand, within IAI46_03055 at 652.981 kb on - strand, within IAI46_03055 at 652.981 kb on - strand, within IAI46_03055 at 653.053 kb on - strand, within IAI46_03055 at 653.058 kb on + strand, within IAI46_03055 at 653.058 kb on + strand, within IAI46_03055 at 653.061 kb on + strand, within IAI46_03055 at 653.061 kb on + strand, within IAI46_03055 at 653.061 kb on + strand, within IAI46_03055 at 653.062 kb on - strand, within IAI46_03055 at 653.062 kb on - strand, within IAI46_03055 at 653.062 kb on - strand, within IAI46_03055 at 653.207 kb on + strand, within IAI46_03055 at 653.458 kb on + strand at 653.458 kb on + strand at 653.458 kb on + strand at 653.458 kb on + strand at 653.459 kb on - strand at 653.459 kb on - strand at 653.460 kb on + strand at 653.460 kb on + strand at 653.460 kb on + strand at 653.461 kb on - strand at 653.461 kb on - strand at 653.475 kb on + strand at 653.510 kb on + strand at 653.510 kb on + strand at 653.525 kb on - strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.540 kb on - strand at 653.540 kb on - strand at 653.540 kb on - strand at 653.543 kb on + strand at 653.543 kb on + strand at 653.543 kb on + strand at 653.851 kb on + strand, within IAI46_03060 at 653.851 kb on + strand, within IAI46_03060 at 653.851 kb on + strand, within IAI46_03060 at 653.851 kb on + strand, within IAI46_03060 at 653.856 kb on + strand, within IAI46_03060 at 653.856 kb on + strand, within IAI46_03060 at 653.856 kb on + strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.999 kb on + strand, within IAI46_03060 at 654.000 kb on - strand, within IAI46_03060 at 654.018 kb on + strand, within IAI46_03060 at 654.018 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.046 kb on - strand, within IAI46_03060 at 654.046 kb on - strand, within IAI46_03060 at 654.046 kb on - strand, within IAI46_03060 at 654.070 kb on + strand at 654.070 kb on + strand at 654.071 kb on - strand at 654.071 kb on - strand at 654.071 kb on - strand at 654.081 kb on - strand at 654.081 kb on - strand at 654.106 kb on + strand at 654.127 kb on - strand at 654.127 kb on - strand at 654.136 kb on + strand at 654.180 kb on - strand at 654.240 kb on - strand at 654.240 kb on - strand at 654.251 kb on + strand at 654.252 kb on - strand at 654.295 kb on + strand at 654.295 kb on + strand at 654.295 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 651,483 + IAI46_03050 0.61 +0.5 651,505 + IAI46_03050 0.62 -0.3 651,505 + IAI46_03050 0.62 +0.5 651,505 + IAI46_03050 0.62 +0.1 651,505 + IAI46_03050 0.62 -0.3 651,506 - IAI46_03050 0.62 -1.4 651,506 - IAI46_03050 0.62 +0.5 651,506 - IAI46_03050 0.62 +0.4 651,506 - IAI46_03050 0.62 -0.1 651,506 - IAI46_03050 0.62 +0.9 651,551 - IAI46_03050 0.65 +1.2 651,577 - IAI46_03050 0.67 -0.7 651,577 - IAI46_03050 0.67 -1.1 651,648 - IAI46_03050 0.72 +1.2 651,649 + IAI46_03050 0.72 -0.1 651,649 + IAI46_03050 0.72 -0.5 651,649 + IAI46_03050 0.72 +0.3 651,649 + IAI46_03050 0.72 -0.3 651,650 - IAI46_03050 0.72 -1.0 651,650 - IAI46_03050 0.72 -0.2 651,650 - IAI46_03050 0.72 +1.0 651,650 - IAI46_03050 0.72 +0.9 651,650 - IAI46_03050 0.72 +0.2 651,652 + IAI46_03050 0.72 +0.6 651,652 + IAI46_03050 0.72 +0.7 651,652 + IAI46_03050 0.72 +0.9 651,652 + IAI46_03050 0.72 +0.9 651,652 + IAI46_03050 0.72 +0.4 651,652 + IAI46_03050 0.72 +0.5 651,653 - IAI46_03050 0.73 +0.7 651,653 - IAI46_03050 0.73 +0.1 651,653 - IAI46_03050 0.73 -1.1 651,653 - IAI46_03050 0.73 +0.4 651,653 - IAI46_03050 0.73 +0.1 651,653 - IAI46_03050 0.73 -0.4 651,800 + IAI46_03050 0.83 +0.0 651,818 + IAI46_03050 0.84 -0.7 651,852 + IAI46_03050 0.87 +0.3 651,852 + IAI46_03050 0.87 -0.1 651,853 - IAI46_03050 0.87 +1.2 651,853 - IAI46_03050 0.87 +0.6 651,853 - IAI46_03050 0.87 +0.2 651,917 + +1.3 651,917 + -0.5 651,917 + -0.3 651,918 - -0.2 651,918 - +0.1 651,918 - -0.1 651,918 - +0.6 651,918 - -0.7 651,918 - -0.4 651,960 - +0.1 651,965 - -0.4 651,965 - -0.1 652,020 + -0.5 652,062 - +0.3 652,099 + +0.7 652,099 + +0.3 652,100 - +0.7 652,102 - +1.1 652,103 + +0.0 652,128 + -0.2 652,129 - -0.4 652,183 + -0.2 652,184 - -1.3 652,184 - +0.3 652,206 + +0.9 652,301 - +0.2 652,357 + -0.0 652,358 - -0.2 652,360 + +0.8 652,415 + -0.8 652,415 + -0.8 652,415 + +0.8 652,415 + +1.0 652,416 - +0.5 652,439 - -0.2 652,520 + +0.4 652,520 + +1.3 652,521 - IAI46_03055 0.10 +0.2 652,566 + IAI46_03055 0.15 +0.7 652,731 + IAI46_03055 0.32 +0.1 652,732 - IAI46_03055 0.32 +0.4 652,779 + IAI46_03055 0.37 -0.2 652,780 - IAI46_03055 0.37 -0.8 652,780 - IAI46_03055 0.37 -0.3 652,883 + IAI46_03055 0.48 +1.3 652,981 - IAI46_03055 0.58 -0.7 652,981 - IAI46_03055 0.58 -0.1 653,053 - IAI46_03055 0.66 -0.8 653,058 + IAI46_03055 0.66 +0.4 653,058 + IAI46_03055 0.66 +0.3 653,061 + IAI46_03055 0.67 +0.6 653,061 + IAI46_03055 0.67 +0.9 653,061 + IAI46_03055 0.67 +0.3 653,062 - IAI46_03055 0.67 +0.8 653,062 - IAI46_03055 0.67 -0.5 653,062 - IAI46_03055 0.67 +0.5 653,207 + IAI46_03055 0.82 +0.2 653,458 + -0.7 653,458 + -0.8 653,458 + +0.6 653,458 + -0.4 653,459 - +0.7 653,459 - -0.4 653,460 + -0.2 653,460 + -1.4 653,460 + -1.0 653,461 - +0.4 653,461 - +0.1 653,475 + +1.4 653,510 + +0.1 653,510 + +0.8 653,525 - +1.3 653,536 + +0.8 653,536 + -1.0 653,536 + -0.2 653,536 + +0.1 653,536 + +0.6 653,537 - -0.3 653,537 - -1.0 653,537 - +0.6 653,537 - +0.3 653,537 - -1.1 653,537 - +0.9 653,539 + +0.4 653,539 + -0.2 653,539 + +0.2 653,539 + +0.5 653,539 + -0.1 653,539 + -0.2 653,540 - +0.0 653,540 - +0.4 653,540 - +0.7 653,543 + -0.1 653,543 + +0.7 653,543 + -0.1 653,851 + IAI46_03060 0.55 -0.2 653,851 + IAI46_03060 0.55 +0.2 653,851 + IAI46_03060 0.55 -0.8 653,851 + IAI46_03060 0.55 -0.5 653,856 + IAI46_03060 0.56 -0.1 653,856 + IAI46_03060 0.56 +1.3 653,856 + IAI46_03060 0.56 +1.0 653,857 - IAI46_03060 0.56 -0.5 653,857 - IAI46_03060 0.56 +0.9 653,857 - IAI46_03060 0.56 +1.1 653,857 - IAI46_03060 0.56 -0.4 653,999 + IAI46_03060 0.80 -0.4 654,000 - IAI46_03060 0.80 -0.4 654,018 + IAI46_03060 0.83 +0.4 654,018 + IAI46_03060 0.83 -0.2 654,045 + IAI46_03060 0.88 +0.3 654,045 + IAI46_03060 0.88 +0.2 654,045 + IAI46_03060 0.88 +0.3 654,045 + IAI46_03060 0.88 -1.0 654,045 + IAI46_03060 0.88 -0.7 654,045 + IAI46_03060 0.88 -1.2 654,046 - IAI46_03060 0.88 +0.7 654,046 - IAI46_03060 0.88 +0.8 654,046 - IAI46_03060 0.88 -0.3 654,070 + +0.2 654,070 + -0.4 654,071 - -0.5 654,071 - +2.3 654,071 - +0.6 654,081 - -1.5 654,081 - +0.1 654,106 + +1.3 654,127 - +0.3 654,127 - -1.1 654,136 + +0.5 654,180 - -0.4 654,240 - +0.0 654,240 - -0.4 654,251 + -0.8 654,252 - +0.3 654,295 + -0.5 654,295 + +1.0 654,295 + +0.8
Or see this region's nucleotide sequence