Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0892 and EX28DRAFT_0893 are separated by 166 nucleotides EX28DRAFT_0893 and EX28DRAFT_0894 are separated by 55 nucleotides
EX28DRAFT_0892: EX28DRAFT_0892 - Uncharacterized conserved protein, at 899,981 to 901,750
_0892
EX28DRAFT_0893: EX28DRAFT_0893 - Phage capsid scaffolding protein (GPO) serine peptidase, at 901,917 to 902,771
_0893
EX28DRAFT_0894: EX28DRAFT_0894 - phage major capsid protein, P2 family, at 902,827 to 903,921
_0894
Position (kb) 901
902
903 Strain fitness (log2 ratio) -2
-1
0
1 at 900.999 kb on + strand, within EX28DRAFT_0892 at 900.999 kb on + strand, within EX28DRAFT_0892 at 901.132 kb on - strand, within EX28DRAFT_0892 at 901.132 kb on - strand, within EX28DRAFT_0892 at 901.135 kb on + strand, within EX28DRAFT_0892 at 901.135 kb on + strand, within EX28DRAFT_0892 at 901.136 kb on - strand, within EX28DRAFT_0892 at 901.146 kb on + strand, within EX28DRAFT_0892 at 901.146 kb on + strand, within EX28DRAFT_0892 at 901.147 kb on - strand, within EX28DRAFT_0892 at 901.159 kb on + strand, within EX28DRAFT_0892 at 901.291 kb on + strand, within EX28DRAFT_0892 at 901.291 kb on + strand, within EX28DRAFT_0892 at 901.368 kb on + strand, within EX28DRAFT_0892 at 901.417 kb on + strand, within EX28DRAFT_0892 at 901.417 kb on + strand, within EX28DRAFT_0892 at 901.550 kb on - strand, within EX28DRAFT_0892 at 901.689 kb on + strand at 901.822 kb on + strand at 901.831 kb on + strand at 901.877 kb on + strand at 902.061 kb on - strand, within EX28DRAFT_0893 at 902.061 kb on - strand, within EX28DRAFT_0893 at 902.169 kb on + strand, within EX28DRAFT_0893 at 902.170 kb on - strand, within EX28DRAFT_0893 at 902.329 kb on - strand, within EX28DRAFT_0893 at 902.624 kb on + strand, within EX28DRAFT_0893 at 902.805 kb on + strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.847 kb on + strand at 903.123 kb on + strand, within EX28DRAFT_0894 at 903.124 kb on - strand, within EX28DRAFT_0894 at 903.127 kb on + strand, within EX28DRAFT_0894 at 903.402 kb on + strand, within EX28DRAFT_0894 at 903.559 kb on + strand, within EX28DRAFT_0894 at 903.560 kb on - strand, within EX28DRAFT_0894 at 903.560 kb on - strand, within EX28DRAFT_0894 at 903.664 kb on + strand, within EX28DRAFT_0894 at 903.720 kb on + strand, within EX28DRAFT_0894
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 900,999 + EX28DRAFT_0892 0.58 +0.1 900,999 + EX28DRAFT_0892 0.58 +0.8 901,132 - EX28DRAFT_0892 0.65 -1.3 901,132 - EX28DRAFT_0892 0.65 +0.2 901,135 + EX28DRAFT_0892 0.65 +0.1 901,135 + EX28DRAFT_0892 0.65 +0.2 901,136 - EX28DRAFT_0892 0.65 -0.2 901,146 + EX28DRAFT_0892 0.66 -0.2 901,146 + EX28DRAFT_0892 0.66 -0.0 901,147 - EX28DRAFT_0892 0.66 +1.2 901,159 + EX28DRAFT_0892 0.67 -0.6 901,291 + EX28DRAFT_0892 0.74 +0.3 901,291 + EX28DRAFT_0892 0.74 +0.2 901,368 + EX28DRAFT_0892 0.78 -0.0 901,417 + EX28DRAFT_0892 0.81 -0.1 901,417 + EX28DRAFT_0892 0.81 +0.7 901,550 - EX28DRAFT_0892 0.89 +1.3 901,689 + +0.4 901,822 + -0.4 901,831 + +0.7 901,877 + +0.6 902,061 - EX28DRAFT_0893 0.17 -1.4 902,061 - EX28DRAFT_0893 0.17 -0.4 902,169 + EX28DRAFT_0893 0.29 +0.4 902,170 - EX28DRAFT_0893 0.30 +0.3 902,329 - EX28DRAFT_0893 0.48 -1.2 902,624 + EX28DRAFT_0893 0.83 -0.6 902,805 + -0.7 902,806 - +0.5 902,806 - +0.6 902,806 - -0.1 902,806 - +0.2 902,806 - -1.2 902,847 + -0.9 903,123 + EX28DRAFT_0894 0.27 +0.8 903,124 - EX28DRAFT_0894 0.27 -0.3 903,127 + EX28DRAFT_0894 0.27 -0.2 903,402 + EX28DRAFT_0894 0.53 +0.1 903,559 + EX28DRAFT_0894 0.67 +0.0 903,560 - EX28DRAFT_0894 0.67 -1.9 903,560 - EX28DRAFT_0894 0.67 -1.4 903,664 + EX28DRAFT_0894 0.76 +0.8 903,720 + EX28DRAFT_0894 0.82 +0.4
Or see this region's nucleotide sequence