Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0374

Experiment: M9 with casaminos and trichloroethylene 76.3 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0373 and EX28DRAFT_0374 are separated by 19 nucleotidesEX28DRAFT_0374 and EX28DRAFT_0375 are separated by 134 nucleotides EX28DRAFT_0373: EX28DRAFT_0373 - Predicted hydrolase of alkaline phosphatase superfamily, at 344,227 to 345,987 _0373 EX28DRAFT_0374: EX28DRAFT_0374 - Uncharacterized protein conserved in bacteria, at 346,007 to 346,234 _0374 EX28DRAFT_0375: EX28DRAFT_0375 - Nucleoid-associated protein, at 346,369 to 347,376 _0375 Position (kb) 346 347Strain fitness (log2 ratio) -1 0 1at 345.026 kb on - strand, within EX28DRAFT_0373at 345.026 kb on - strand, within EX28DRAFT_0373at 345.036 kb on + strand, within EX28DRAFT_0373at 345.036 kb on + strand, within EX28DRAFT_0373at 345.038 kb on + strand, within EX28DRAFT_0373at 345.039 kb on - strand, within EX28DRAFT_0373at 345.056 kb on + strand, within EX28DRAFT_0373at 345.102 kb on + strand, within EX28DRAFT_0373at 345.103 kb on - strand, within EX28DRAFT_0373at 345.103 kb on - strand, within EX28DRAFT_0373at 345.173 kb on + strand, within EX28DRAFT_0373at 346.118 kb on - strand, within EX28DRAFT_0374at 346.170 kb on - strand, within EX28DRAFT_0374at 346.270 kb on - strandat 346.270 kb on - strandat 346.270 kb on - strandat 346.407 kb on + strandat 346.739 kb on + strand, within EX28DRAFT_0375at 347.048 kb on - strand, within EX28DRAFT_0375at 347.053 kb on + strand, within EX28DRAFT_0375at 347.054 kb on - strand, within EX28DRAFT_0375

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM
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345,026 - EX28DRAFT_0373 0.45 +1.3
345,026 - EX28DRAFT_0373 0.45 +1.2
345,036 + EX28DRAFT_0373 0.46 +0.4
345,036 + EX28DRAFT_0373 0.46 +0.1
345,038 + EX28DRAFT_0373 0.46 +0.5
345,039 - EX28DRAFT_0373 0.46 -0.2
345,056 + EX28DRAFT_0373 0.47 -0.5
345,102 + EX28DRAFT_0373 0.50 +0.0
345,103 - EX28DRAFT_0373 0.50 -0.2
345,103 - EX28DRAFT_0373 0.50 +0.4
345,173 + EX28DRAFT_0373 0.54 +1.4
346,118 - EX28DRAFT_0374 0.49 -1.1
346,170 - EX28DRAFT_0374 0.71 -0.6
346,270 - -0.5
346,270 - +1.0
346,270 - +0.7
346,407 + +0.6
346,739 + EX28DRAFT_0375 0.37 +0.4
347,048 - EX28DRAFT_0375 0.67 +0.7
347,053 + EX28DRAFT_0375 0.68 +0.6
347,054 - EX28DRAFT_0375 0.68 +0.3

Or see this region's nucleotide sequence