Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0366 and EX28DRAFT_0367 overlap by 38 nucleotides EX28DRAFT_0367 and EX28DRAFT_0368 are separated by 187 nucleotides
EX28DRAFT_0366: EX28DRAFT_0366 - Mg2+ transporter (mgtE), at 337,082 to 338,518
_0366
EX28DRAFT_0367: EX28DRAFT_0367 - Sulfate permease and related transporters (MFS superfamily), at 338,481 to 339,770
_0367
EX28DRAFT_0368: EX28DRAFT_0368 - malate:quinone-oxidoreductase, at 339,958 to 341,607
_0368
Position (kb) 338
339
340 Strain fitness (log2 ratio) -1
0
1 at 337.930 kb on - strand, within EX28DRAFT_0366 at 337.930 kb on - strand, within EX28DRAFT_0366 at 337.932 kb on - strand, within EX28DRAFT_0366 at 338.171 kb on - strand, within EX28DRAFT_0366 at 338.172 kb on + strand, within EX28DRAFT_0366 at 338.172 kb on + strand, within EX28DRAFT_0366 at 338.239 kb on + strand, within EX28DRAFT_0366 at 338.393 kb on - strand at 338.483 kb on - strand at 338.611 kb on - strand, within EX28DRAFT_0367 at 338.712 kb on - strand, within EX28DRAFT_0367 at 338.714 kb on + strand, within EX28DRAFT_0367 at 338.714 kb on + strand, within EX28DRAFT_0367 at 338.715 kb on - strand, within EX28DRAFT_0367 at 338.933 kb on + strand, within EX28DRAFT_0367 at 339.029 kb on + strand, within EX28DRAFT_0367 at 339.030 kb on - strand, within EX28DRAFT_0367 at 339.196 kb on + strand, within EX28DRAFT_0367 at 339.341 kb on + strand, within EX28DRAFT_0367 at 339.341 kb on + strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.426 kb on + strand, within EX28DRAFT_0367 at 339.717 kb on - strand at 339.771 kb on - strand at 339.771 kb on - strand at 339.774 kb on - strand at 339.873 kb on + strand at 339.945 kb on + strand at 339.952 kb on + strand at 340.103 kb on - strand at 340.103 kb on - strand at 340.132 kb on - strand, within EX28DRAFT_0368 at 340.132 kb on - strand, within EX28DRAFT_0368 at 340.132 kb on - strand, within EX28DRAFT_0368 at 340.228 kb on + strand, within EX28DRAFT_0368 at 340.228 kb on + strand, within EX28DRAFT_0368 at 340.229 kb on - strand, within EX28DRAFT_0368 at 340.231 kb on - strand, within EX28DRAFT_0368 at 340.231 kb on - strand, within EX28DRAFT_0368 at 340.258 kb on - strand, within EX28DRAFT_0368 at 340.260 kb on + strand, within EX28DRAFT_0368 at 340.261 kb on - strand, within EX28DRAFT_0368 at 340.468 kb on + strand, within EX28DRAFT_0368 at 340.575 kb on + strand, within EX28DRAFT_0368 at 340.579 kb on + strand, within EX28DRAFT_0368
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 337,930 - EX28DRAFT_0366 0.59 +0.3 337,930 - EX28DRAFT_0366 0.59 +0.2 337,932 - EX28DRAFT_0366 0.59 +0.4 338,171 - EX28DRAFT_0366 0.76 -0.2 338,172 + EX28DRAFT_0366 0.76 +0.2 338,172 + EX28DRAFT_0366 0.76 -0.4 338,239 + EX28DRAFT_0366 0.81 +1.1 338,393 - +0.2 338,483 - +0.9 338,611 - EX28DRAFT_0367 0.10 -0.3 338,712 - EX28DRAFT_0367 0.18 +0.2 338,714 + EX28DRAFT_0367 0.18 -0.4 338,714 + EX28DRAFT_0367 0.18 +0.1 338,715 - EX28DRAFT_0367 0.18 +0.5 338,933 + EX28DRAFT_0367 0.35 -0.6 339,029 + EX28DRAFT_0367 0.42 +0.1 339,030 - EX28DRAFT_0367 0.43 +1.2 339,196 + EX28DRAFT_0367 0.55 -0.6 339,341 + EX28DRAFT_0367 0.67 +0.1 339,341 + EX28DRAFT_0367 0.67 +0.4 339,422 - EX28DRAFT_0367 0.73 -1.7 339,422 - EX28DRAFT_0367 0.73 -1.4 339,422 - EX28DRAFT_0367 0.73 +0.0 339,422 - EX28DRAFT_0367 0.73 -0.3 339,426 + EX28DRAFT_0367 0.73 -0.8 339,717 - -0.2 339,771 - +0.1 339,771 - +0.3 339,774 - -0.3 339,873 + -1.1 339,945 + +0.6 339,952 + +1.4 340,103 - -0.1 340,103 - +0.7 340,132 - EX28DRAFT_0368 0.11 -0.1 340,132 - EX28DRAFT_0368 0.11 -0.2 340,132 - EX28DRAFT_0368 0.11 +0.0 340,228 + EX28DRAFT_0368 0.16 +0.6 340,228 + EX28DRAFT_0368 0.16 -0.2 340,229 - EX28DRAFT_0368 0.16 -0.9 340,231 - EX28DRAFT_0368 0.17 +0.1 340,231 - EX28DRAFT_0368 0.17 -0.9 340,258 - EX28DRAFT_0368 0.18 -0.2 340,260 + EX28DRAFT_0368 0.18 -0.3 340,261 - EX28DRAFT_0368 0.18 -0.5 340,468 + EX28DRAFT_0368 0.31 -0.1 340,575 + EX28DRAFT_0368 0.37 +0.0 340,579 + EX28DRAFT_0368 0.38 +0.2
Or see this region's nucleotide sequence