Strain Fitness in Escherichia coli BL21 around ECD_01557

Experiment: NophageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01556 and ECD_01557 are separated by 60 nucleotidesECD_01557 and ECD_01558 are separated by 10 nucleotidesECD_01558 and ECD_01559 are separated by 1 nucleotides ECD_01556: ECD_01556 - putative selenate reductase, periplasmic, at 1,603,266 to 1,605,692 _01556 ECD_01557: ECD_01557 - S- and N-oxide reductase, A subunit, periplasmic, at 1,605,753 to 1,608,176 _01557 ECD_01558: ECD_01558 - oxidoreductase, Fe-S subunit, at 1,608,187 to 1,608,804 _01558 ECD_01559: ECD_01559 - oxidoreductase, membrane subunit, at 1,608,806 to 1,609,660 _01559 Position (kb) 1605 1606 1607 1608 1609Strain fitness (log2 ratio) -1 0 1at 1605.031 kb on - strand, within ECD_01556at 1605.665 kb on + strandat 1605.935 kb on + strandat 1606.150 kb on + strand, within ECD_01557at 1606.332 kb on + strand, within ECD_01557at 1606.672 kb on - strand, within ECD_01557at 1606.769 kb on + strand, within ECD_01557at 1607.419 kb on - strand, within ECD_01557at 1607.738 kb on + strand, within ECD_01557at 1608.605 kb on + strand, within ECD_01558at 1608.605 kb on + strand, within ECD_01558at 1608.605 kb on + strand, within ECD_01558

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Per-strain Table

Position Strand Gene LocusTag Fraction NophageControl
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1,605,031 - ECD_01556 0.73 +0.7
1,605,665 + -0.8
1,605,935 + -0.4
1,606,150 + ECD_01557 0.16 +0.2
1,606,332 + ECD_01557 0.24 -0.8
1,606,672 - ECD_01557 0.38 -1.2
1,606,769 + ECD_01557 0.42 +0.8
1,607,419 - ECD_01557 0.69 -0.4
1,607,738 + ECD_01557 0.82 -0.6
1,608,605 + ECD_01558 0.68 -0.1
1,608,605 + ECD_01558 0.68 -1.0
1,608,605 + ECD_01558 0.68 -1.6

Or see this region's nucleotide sequence