Strain Fitness in Bosea sp. OAE506 around ABIE41_RS17280

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS17270 and ABIE41_RS17275 are separated by 232 nucleotidesABIE41_RS17275 and ABIE41_RS17280 are separated by 3 nucleotidesABIE41_RS17280 and ABIE41_RS17285 overlap by 4 nucleotidesABIE41_RS17285 and ABIE41_RS17290 are separated by 1 nucleotides ABIE41_RS17270: ABIE41_RS17270 - bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase, at 3,557,710 to 3,560,034 _RS17270 ABIE41_RS17275: ABIE41_RS17275 - SDR family oxidoreductase, at 3,560,267 to 3,561,022 _RS17275 ABIE41_RS17280: ABIE41_RS17280 - MarR family transcriptional regulator, at 3,561,026 to 3,561,583 _RS17280 ABIE41_RS17285: ABIE41_RS17285 - enoyl-CoA hydratase family protein, at 3,561,580 to 3,562,416 _RS17285 ABIE41_RS17290: ABIE41_RS17290 - acyl-CoA dehydrogenase family protein, at 3,562,418 to 3,563,620 _RS17290 Position (kb) 3561 3562Strain fitness (log2 ratio) -3 -2 -1 0 1at 3560.028 kb on + strandat 3560.029 kb on - strandat 3560.151 kb on + strandat 3560.151 kb on + strandat 3560.151 kb on + strandat 3560.151 kb on + strandat 3560.151 kb on + strandat 3560.151 kb on + strandat 3560.152 kb on - strandat 3560.152 kb on - strandat 3560.152 kb on - strandat 3560.152 kb on - strandat 3560.458 kb on + strand, within ABIE41_RS17275at 3560.693 kb on + strand, within ABIE41_RS17275at 3560.700 kb on - strand, within ABIE41_RS17275at 3560.700 kb on - strand, within ABIE41_RS17275at 3560.700 kb on - strand, within ABIE41_RS17275at 3560.711 kb on + strand, within ABIE41_RS17275at 3560.711 kb on + strand, within ABIE41_RS17275at 3560.711 kb on + strand, within ABIE41_RS17275at 3560.712 kb on - strand, within ABIE41_RS17275at 3560.808 kb on - strand, within ABIE41_RS17275at 3560.821 kb on + strand, within ABIE41_RS17275at 3560.822 kb on - strand, within ABIE41_RS17275at 3560.954 kb on + strandat 3560.954 kb on + strandat 3560.955 kb on - strandat 3561.021 kb on - strandat 3562.120 kb on + strand, within ABIE41_RS17285at 3562.120 kb on + strand, within ABIE41_RS17285at 3562.121 kb on - strand, within ABIE41_RS17285at 3562.369 kb on + strandat 3562.370 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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3,560,028 + +0.2
3,560,029 - +0.2
3,560,151 + -0.3
3,560,151 + +0.0
3,560,151 + -0.3
3,560,151 + -0.4
3,560,151 + -0.3
3,560,151 + -2.3
3,560,152 - +0.3
3,560,152 - -3.1
3,560,152 - +0.2
3,560,152 - +0.4
3,560,458 + ABIE41_RS17275 0.25 -1.2
3,560,693 + ABIE41_RS17275 0.56 +1.0
3,560,700 - ABIE41_RS17275 0.57 -0.9
3,560,700 - ABIE41_RS17275 0.57 +0.3
3,560,700 - ABIE41_RS17275 0.57 +1.5
3,560,711 + ABIE41_RS17275 0.59 +1.3
3,560,711 + ABIE41_RS17275 0.59 +0.4
3,560,711 + ABIE41_RS17275 0.59 -0.2
3,560,712 - ABIE41_RS17275 0.59 -0.3
3,560,808 - ABIE41_RS17275 0.72 -0.1
3,560,821 + ABIE41_RS17275 0.73 -0.8
3,560,822 - ABIE41_RS17275 0.73 +1.1
3,560,954 + +0.5
3,560,954 + +0.2
3,560,955 - -0.6
3,561,021 - -0.5
3,562,120 + ABIE41_RS17285 0.65 -0.9
3,562,120 + ABIE41_RS17285 0.65 -1.3
3,562,121 - ABIE41_RS17285 0.65 -0.4
3,562,369 + +0.4
3,562,370 - +1.5

Or see this region's nucleotide sequence