Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS14940

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
2,933,260	-		ABIE40_RS14935	0.69	-1.0
2,933,302	+		ABIE40_RS14935	0.71	+0.5
2,933,303	-		ABIE40_RS14935	0.71	+0.2
2,933,303	-		ABIE40_RS14935	0.71	-2.3
2,933,303	-		ABIE40_RS14935	0.71	-1.0
2,933,303	-		ABIE40_RS14935	0.71	-0.4
2,933,315	+		ABIE40_RS14935	0.71	-0.8
2,933,316	-		ABIE40_RS14935	0.71	-0.2
2,933,316	-		ABIE40_RS14935	0.71	+0.5
2,933,352	+		ABIE40_RS14935	0.72	-0.2
2,933,352	+		ABIE40_RS14935	0.72	-1.5
2,933,352	+		ABIE40_RS14935	0.72	+0.3
2,933,353	-		ABIE40_RS14935	0.72	+1.3
2,933,353	-		ABIE40_RS14935	0.72	-0.7
2,933,353	-		ABIE40_RS14935	0.72	+0.5
2,933,386	-		ABIE40_RS14935	0.73	+0.5
2,933,386	-		ABIE40_RS14935	0.73	-0.4
2,933,435	+		ABIE40_RS14935	0.75	+0.1
2,933,436	-		ABIE40_RS14935	0.75	+0.5
2,933,535	+		ABIE40_RS14935	0.78	-0.3
2,933,535	+		ABIE40_RS14935	0.78	+0.2
2,933,536	-		ABIE40_RS14935	0.78	-0.8
2,933,537	+		ABIE40_RS14935	0.78	+0.8
2,933,537	+		ABIE40_RS14935	0.78	+2.0
2,933,537	+		ABIE40_RS14935	0.78	-0.1
2,933,537	+		ABIE40_RS14935	0.78	-1.3
2,933,537	+		ABIE40_RS14935	0.78	-1.5
2,933,538	-		ABIE40_RS14935	0.78	-0.7
2,933,538	-		ABIE40_RS14935	0.78	+0.1
2,933,538	-		ABIE40_RS14935	0.78	+0.7
2,933,538	-		ABIE40_RS14935	0.78	+0.0
2,933,538	-		ABIE40_RS14935	0.78	+1.2
2,933,538	-		ABIE40_RS14935	0.78	-0.0
2,933,538	-		ABIE40_RS14935	0.78	+1.3
2,933,538	-		ABIE40_RS14935	0.78	+0.3
2,933,538	-		ABIE40_RS14935	0.78	+0.3
2,933,540	+		ABIE40_RS14935	0.78	-1.0
2,933,540	+		ABIE40_RS14935	0.78	+0.3
2,933,540	+		ABIE40_RS14935	0.78	+0.4
2,933,540	+		ABIE40_RS14935	0.78	-0.7
2,933,540	+		ABIE40_RS14935	0.78	-1.4
2,933,540	+		ABIE40_RS14935	0.78	+0.8
2,933,540	+		ABIE40_RS14935	0.78	+0.0
2,933,540	+		ABIE40_RS14935	0.78	-0.6
2,933,540	+		ABIE40_RS14935	0.78	-0.2
2,933,540	+		ABIE40_RS14935	0.78	+0.3
2,933,540	+		ABIE40_RS14935	0.78	-1.7
2,933,540	+		ABIE40_RS14935	0.78	+0.5
2,933,540	+		ABIE40_RS14935	0.78	-0.3
2,933,540	+		ABIE40_RS14935	0.78	-0.7
2,933,541	-		ABIE40_RS14935	0.78	-0.4
2,933,541	-		ABIE40_RS14935	0.78	-0.2
2,933,541	-		ABIE40_RS14935	0.78	-0.6
2,933,541	-		ABIE40_RS14935	0.78	-0.6
2,933,541	-		ABIE40_RS14935	0.78	+0.5
2,933,541	-		ABIE40_RS14935	0.78	-0.3
2,933,541	-		ABIE40_RS14935	0.78	+1.4
2,933,541	-		ABIE40_RS14935	0.78	-0.6
2,933,541	-		ABIE40_RS14935	0.78	-0.4
2,933,541	-		ABIE40_RS14935	0.78	-0.4
2,933,541	-		ABIE40_RS14935	0.78	+0.5
2,933,541	-		ABIE40_RS14935	0.78	-0.1
2,933,541	-		ABIE40_RS14935	0.78	+0.5
2,933,541	-		ABIE40_RS14935	0.78	-0.1
2,933,541	-		ABIE40_RS14935	0.78	-0.3
2,933,544	+		ABIE40_RS14935	0.78	+0.5
2,933,544	+		ABIE40_RS14935	0.78	-1.3
2,933,544	+		ABIE40_RS14935	0.78	-1.2
2,933,544	+		ABIE40_RS14935	0.78	-0.7
2,933,544	+		ABIE40_RS14935	0.78	+0.6
2,933,544	+		ABIE40_RS14935	0.78	+1.0
2,933,544	+		ABIE40_RS14935	0.78	-0.4
2,933,544	+		ABIE40_RS14935	0.78	-0.2
2,933,544	+		ABIE40_RS14935	0.78	-2.7
2,933,544	+		ABIE40_RS14935	0.78	-0.6
2,933,544	+		ABIE40_RS14935	0.78	-0.0
2,933,544	+		ABIE40_RS14935	0.78	-1.0
2,933,544	+		ABIE40_RS14935	0.78	-0.3
2,933,544	+		ABIE40_RS14935	0.78	-0.7
2,933,544	+		ABIE40_RS14935	0.78	-1.7
2,933,544	+		ABIE40_RS14935	0.78	-0.1
2,933,545	-		ABIE40_RS14935	0.78	+0.2
2,933,545	-		ABIE40_RS14935	0.78	-0.2
2,933,545	-		ABIE40_RS14935	0.78	+0.2
2,933,545	-		ABIE40_RS14935	0.78	-0.6
2,933,545	-		ABIE40_RS14935	0.78	-0.4
2,933,545	-		ABIE40_RS14935	0.78	-0.7
2,933,545	-		ABIE40_RS14935	0.78	-0.4
2,933,545	-		ABIE40_RS14935	0.78	+0.7
2,933,706	+		ABIE40_RS14935	0.83	-1.9
2,933,706	+		ABIE40_RS14935	0.83	-0.0
2,933,706	+		ABIE40_RS14935	0.83	-0.4
2,933,706	+		ABIE40_RS14935	0.83	-0.5
2,933,706	+		ABIE40_RS14935	0.83	-1.1
2,933,706	+		ABIE40_RS14935	0.83	-1.0
2,933,706	+		ABIE40_RS14935	0.83	+0.2
2,933,707	-		ABIE40_RS14935	0.83	-0.5
2,933,707	-		ABIE40_RS14935	0.83	+1.1
2,933,707	-		ABIE40_RS14935	0.83	-0.1
2,933,707	-		ABIE40_RS14935	0.83	+0.3
2,933,707	-		ABIE40_RS14935	0.83	-0.5
2,933,707	-		ABIE40_RS14935	0.83	-1.3
2,933,708	+		ABIE40_RS14935	0.83	-0.4
2,933,708	+		ABIE40_RS14935	0.83	+1.3
2,933,757	+		ABIE40_RS14935	0.85	-0.5
2,933,757	+		ABIE40_RS14935	0.85	-1.5
2,933,758	-		ABIE40_RS14935	0.85	-0.7
2,934,122	+				+0.5
2,934,122	+				+1.0
2,934,123	-				-0.6
2,934,332	-				+0.3
2,934,451	+		ABIE40_RS14940	0.20	+0.3
2,934,451	+		ABIE40_RS14940	0.20	-0.2
2,934,451	+		ABIE40_RS14940	0.20	-5.0
2,934,452	-		ABIE40_RS14940	0.20	-3.7
2,934,452	-		ABIE40_RS14940	0.20	-3.2
2,934,460	+		ABIE40_RS14940	0.21	-3.9
2,934,460	+		ABIE40_RS14940	0.21	-1.9
2,934,479	-		ABIE40_RS14940	0.23	-4.0
2,934,595	+		ABIE40_RS14940	0.34	-2.9
2,934,595	+		ABIE40_RS14940	0.34	-3.5
2,934,596	-		ABIE40_RS14940	0.34	-3.6
2,934,596	-		ABIE40_RS14940	0.34	-3.4
2,934,726	-		ABIE40_RS14940	0.47	-3.3
2,934,726	-		ABIE40_RS14940	0.47	-2.5
2,934,726	-		ABIE40_RS14940	0.47	-5.8
2,934,727	+		ABIE40_RS14940	0.47	-3.0
2,934,727	+		ABIE40_RS14940	0.47	-2.9
2,934,727	+		ABIE40_RS14940	0.47	-5.2
2,934,727	+		ABIE40_RS14940	0.47	-3.7
2,934,727	+		ABIE40_RS14940	0.47	-1.5
2,934,727	+		ABIE40_RS14940	0.47	-4.0
2,934,728	-		ABIE40_RS14940	0.48	-3.0
2,934,728	-		ABIE40_RS14940	0.48	-4.1
2,934,728	-		ABIE40_RS14940	0.48	-2.7
2,934,853	+		ABIE40_RS14940	0.60	-3.0
2,934,853	+		ABIE40_RS14940	0.60	-2.4
2,934,853	+		ABIE40_RS14940	0.60	-3.4
2,934,854	-		ABIE40_RS14940	0.60	-5.3
2,934,854	-		ABIE40_RS14940	0.60	-2.8
2,934,854	-		ABIE40_RS14940	0.60	-3.9
2,934,854	-		ABIE40_RS14940	0.60	-4.2
2,934,854	-		ABIE40_RS14940	0.60	+0.3
2,934,854	-		ABIE40_RS14940	0.60	-3.1
2,934,854	-		ABIE40_RS14940	0.60	-1.9
2,934,854	-		ABIE40_RS14940	0.60	-5.3
2,934,854	-		ABIE40_RS14940	0.60	-2.9
2,934,856	-		ABIE40_RS14940	0.60	-1.0
2,935,231	+				-4.2
2,935,232	-				-2.5
2,935,232	-				-3.0
2,935,244	-				-3.0
2,935,323	-				-0.9
2,935,323	-				-0.2