Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS10535

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
2,037,876	-				-1.1
2,037,906	-				-1.9
2,037,906	-				-0.1
2,037,944	-				+2.1
2,037,989	-				-0.3
2,038,018	-				+0.5
2,038,057	-				-0.1
2,038,057	-				-3.7
2,038,057	-				-0.1
2,038,081	+				-0.9
2,038,081	+				-1.1
2,038,082	-				-0.8
2,038,110	-				-1.6
2,038,176	+		ABIE40_RS10530	0.16	-1.1
2,038,176	+		ABIE40_RS10530	0.16	+0.2
2,038,176	+		ABIE40_RS10530	0.16	-0.1
2,038,176	+		ABIE40_RS10530	0.16	-0.4
2,038,177	-		ABIE40_RS10530	0.16	-1.5
2,038,177	-		ABIE40_RS10530	0.16	+0.9
2,038,177	-		ABIE40_RS10530	0.16	-0.1
2,038,177	-		ABIE40_RS10530	0.16	+0.7
2,038,303	-		ABIE40_RS10530	0.34	-0.3
2,038,303	-		ABIE40_RS10530	0.34	-0.2
2,038,303	-		ABIE40_RS10530	0.34	+0.8
2,038,303	-		ABIE40_RS10530	0.34	-0.4
2,038,303	-		ABIE40_RS10530	0.34	+0.0
2,038,367	+		ABIE40_RS10530	0.43	+2.2
2,038,367	+		ABIE40_RS10530	0.43	-0.6
2,038,367	+		ABIE40_RS10530	0.43	-1.0
2,038,368	-		ABIE40_RS10530	0.43	+0.2
2,038,456	-		ABIE40_RS10530	0.56	-0.8
2,038,481	+		ABIE40_RS10530	0.59	+0.6
2,038,586	+		ABIE40_RS10530	0.74	-1.6
2,038,586	+		ABIE40_RS10530	0.74	-0.9
2,038,823	+				+2.5
2,038,823	+				-1.6
2,038,824	-				-0.2
2,038,824	-				-1.1
2,038,886	+				-0.7
2,038,886	+				-2.8
2,038,886	+				-4.6
2,038,887	-				-2.1
2,038,887	-				-2.7
2,038,890	+				-3.5
2,038,901	+				-1.3
2,038,901	+				-1.8
2,038,901	+				-0.5
2,038,901	+				-2.4
2,038,917	-				-2.2
2,038,917	-				-2.0
2,038,917	-				-4.3
2,038,955	+				-3.6
2,038,955	+				-3.2
2,038,955	+				-0.9
2,038,955	+				-1.6
2,038,956	-				-2.1
2,038,964	+				+0.2
2,038,965	-				-1.8
2,038,965	-				+1.2
2,038,965	-				-3.0
2,038,965	-				-2.2
2,039,153	+		ABIE40_RS10535	0.17	-2.3
2,039,153	+		ABIE40_RS10535	0.17	+0.2
2,039,153	+		ABIE40_RS10535	0.17	+1.2
2,039,153	+		ABIE40_RS10535	0.17	-2.1
2,039,153	+		ABIE40_RS10535	0.17	-1.2
2,039,154	-		ABIE40_RS10535	0.17	-1.5
2,039,154	-		ABIE40_RS10535	0.17	-0.4
2,039,154	-		ABIE40_RS10535	0.17	-2.8
2,039,154	-		ABIE40_RS10535	0.17	-1.4
2,039,154	-		ABIE40_RS10535	0.17	-3.4
2,039,250	-		ABIE40_RS10535	0.22	-0.6
2,039,300	+		ABIE40_RS10535	0.25	-2.9
2,039,300	+		ABIE40_RS10535	0.25	-1.6
2,039,300	+		ABIE40_RS10535	0.25	-3.0
2,039,300	+		ABIE40_RS10535	0.25	-1.8
2,039,318	+		ABIE40_RS10535	0.26	-2.4
2,039,318	+		ABIE40_RS10535	0.26	+0.2
2,039,319	-		ABIE40_RS10535	0.26	-1.8
2,039,319	-		ABIE40_RS10535	0.26	-2.5
2,039,319	-		ABIE40_RS10535	0.26	-3.4
2,039,492	+		ABIE40_RS10535	0.35	-2.4
2,039,493	-		ABIE40_RS10535	0.35	-1.1
2,039,493	-		ABIE40_RS10535	0.35	+0.4
2,039,495	+		ABIE40_RS10535	0.35	-1.8
2,039,495	+		ABIE40_RS10535	0.35	-3.0
2,039,495	+		ABIE40_RS10535	0.35	+0.2
2,039,496	-		ABIE40_RS10535	0.35	-3.3
2,039,496	-		ABIE40_RS10535	0.35	-2.7
2,039,496	-		ABIE40_RS10535	0.35	-1.4
2,039,496	-		ABIE40_RS10535	0.35	-2.9
2,039,496	-		ABIE40_RS10535	0.35	-1.1
2,039,496	-		ABIE40_RS10535	0.35	-1.5
2,039,528	+		ABIE40_RS10535	0.37	-4.3
2,039,529	-		ABIE40_RS10535	0.37	-1.9
2,039,730	+		ABIE40_RS10535	0.48	-1.5
2,039,733	-		ABIE40_RS10535	0.48	-1.9
2,039,733	-		ABIE40_RS10535	0.48	-2.4
2,039,733	-		ABIE40_RS10535	0.48	-2.5
2,039,954	+		ABIE40_RS10535	0.60	+0.8
2,039,954	+		ABIE40_RS10535	0.60	-0.4
2,039,954	+		ABIE40_RS10535	0.60	-1.3
2,039,954	+		ABIE40_RS10535	0.60	-1.1
2,039,955	-		ABIE40_RS10535	0.60	-2.6
2,039,955	-		ABIE40_RS10535	0.60	-2.2
2,040,033	-		ABIE40_RS10535	0.64	-4.8
2,040,083	+		ABIE40_RS10535	0.67	-1.3
2,040,083	+		ABIE40_RS10535	0.67	-1.9
2,040,083	+		ABIE40_RS10535	0.67	-1.7
2,040,083	+		ABIE40_RS10535	0.67	-2.5
2,040,084	-		ABIE40_RS10535	0.67	-0.4
2,040,084	-		ABIE40_RS10535	0.67	-1.8
2,040,084	-		ABIE40_RS10535	0.67	-0.8
2,040,188	+		ABIE40_RS10535	0.72	+0.2
2,040,188	+		ABIE40_RS10535	0.72	-0.1
2,040,306	-		ABIE40_RS10535	0.78	-2.9
2,040,309	-		ABIE40_RS10535	0.79	-0.1
2,040,309	-		ABIE40_RS10535	0.79	-2.7
2,040,366	-		ABIE40_RS10535	0.82	-1.5
2,040,427	+		ABIE40_RS10535	0.85	-2.1
2,040,427	+		ABIE40_RS10535	0.85	-2.4
2,040,483	-		ABIE40_RS10535	0.88	-0.4
2,040,483	-		ABIE40_RS10535	0.88	+0.2
2,040,483	-		ABIE40_RS10535	0.88	+0.2
2,040,483	-		ABIE40_RS10535	0.88	-0.8
2,040,486	+		ABIE40_RS10535	0.88	-1.7
2,040,486	+		ABIE40_RS10535	0.88	-2.5
2,040,486	+		ABIE40_RS10535	0.88	-2.9
2,040,486	+		ABIE40_RS10535	0.88	-2.1
2,040,486	+		ABIE40_RS10535	0.88	-3.0
2,040,486	+		ABIE40_RS10535	0.88	-1.6
2,040,486	+		ABIE40_RS10535	0.88	-3.3
2,040,486	+		ABIE40_RS10535	0.88	-1.6
2,040,486	+		ABIE40_RS10535	0.88	-1.9
2,040,487	-		ABIE40_RS10535	0.88	-1.4
2,040,487	-		ABIE40_RS10535	0.88	-4.1
2,040,487	-		ABIE40_RS10535	0.88	-2.5
2,040,487	-		ABIE40_RS10535	0.88	-2.2
2,040,487	-		ABIE40_RS10535	0.88	-1.9
2,040,487	-		ABIE40_RS10535	0.88	-3.9
2,040,488	+		ABIE40_RS10535	0.88	-3.2
2,040,488	+		ABIE40_RS10535	0.88	-1.4
2,040,488	+		ABIE40_RS10535	0.88	-3.3
2,040,488	+		ABIE40_RS10535	0.88	-2.9
2,040,488	+		ABIE40_RS10535	0.88	+0.2
2,040,488	+		ABIE40_RS10535	0.88	-2.3
2,040,489	-		ABIE40_RS10535	0.88	+1.8
2,040,489	-		ABIE40_RS10535	0.88	-1.9
2,040,489	-		ABIE40_RS10535	0.88	-1.6
2,040,489	-		ABIE40_RS10535	0.88	-0.0
2,040,489	-		ABIE40_RS10535	0.88	-1.4
2,040,489	-		ABIE40_RS10535	0.88	-2.7
2,040,489	-		ABIE40_RS10535	0.88	-1.9
2,040,489	-		ABIE40_RS10535	0.88	-3.3
2,040,492	-		ABIE40_RS10535	0.88	-0.8
2,040,492	-		ABIE40_RS10535	0.88	-3.8
2,040,492	-		ABIE40_RS10535	0.88	-1.4
2,040,492	-		ABIE40_RS10535	0.88	-3.2
2,040,625	+				-3.3
2,040,625	+				-1.8
2,040,626	-				-2.7
2,040,626	-				-2.6
2,040,626	-				-1.4
2,040,626	-				-3.4
2,040,626	-				+0.2
2,040,626	-				-0.9
2,040,627	+				-0.8
2,040,627	+				-1.9
2,040,627	+				-0.8
2,040,628	-				-2.7
2,040,628	-				-2.8
2,040,628	-				-0.7
2,040,628	-				-2.1
2,040,779	-				+0.6
2,040,779	-				-0.6
2,040,842	+				-2.5
2,040,842	+				-2.8
2,040,842	+				-2.0
2,040,843	-				+0.1
2,040,880	+				-3.0
2,040,888	+				-0.9
2,040,891	+				+0.4
2,040,950	+				+0.4
2,040,950	+				-0.4
2,040,951	-				-1.9
2,040,953	-				+0.2
2,041,016	+				+0.8
2,041,016	+				-1.4
2,041,059	+				-0.6
2,041,059	+				+0.7
2,041,059	+				-0.1
2,041,059	+				+0.4
2,041,060	-				-0.1
2,041,060	-				-0.2
2,041,061	+				-0.8
2,041,061	+				-1.3
2,041,062	-				+1.1
2,041,062	-				+0.0
2,041,062	-				+0.2
2,041,062	-				+0.4
2,041,076	+				+0.2
2,041,076	+				-1.1
2,041,077	-				+1.6
2,041,164	-				+0.1
2,041,297	-		ABIE40_RS10540	0.14	+0.8
2,041,297	-		ABIE40_RS10540	0.14	-0.0
2,041,322	+		ABIE40_RS10540	0.16	-0.4
2,041,342	+		ABIE40_RS10540	0.17	-0.3
2,041,411	+		ABIE40_RS10540	0.22	-0.2
2,041,411	+		ABIE40_RS10540	0.22	+0.4
2,041,412	-		ABIE40_RS10540	0.22	-0.1
2,041,412	-		ABIE40_RS10540	0.22	+0.1
2,041,507	+		ABIE40_RS10540	0.29	+0.9
2,041,507	+		ABIE40_RS10540	0.29	+1.1
2,041,507	+		ABIE40_RS10540	0.29	-0.2
2,041,507	+		ABIE40_RS10540	0.29	-0.2
2,041,532	+		ABIE40_RS10540	0.31	-0.3
2,041,532	+		ABIE40_RS10540	0.31	-0.2
2,041,532	+		ABIE40_RS10540	0.31	+0.7
2,041,532	+		ABIE40_RS10540	0.31	-0.2
2,041,532	+		ABIE40_RS10540	0.31	-0.1
2,041,532	+		ABIE40_RS10540	0.31	-0.2
2,041,532	+		ABIE40_RS10540	0.31	+0.2
2,041,532	+		ABIE40_RS10540	0.31	-0.8
2,041,532	+		ABIE40_RS10540	0.31	-0.5
2,041,533	-		ABIE40_RS10540	0.31	-0.2
2,041,533	-		ABIE40_RS10540	0.31	+0.1
2,041,533	-		ABIE40_RS10540	0.31	+0.7
2,041,642	+		ABIE40_RS10540	0.39	-0.4
2,041,642	+		ABIE40_RS10540	0.39	+0.9
2,041,642	+		ABIE40_RS10540	0.39	+0.1
2,041,642	+		ABIE40_RS10540	0.39	+1.0
2,041,642	+		ABIE40_RS10540	0.39	-0.2
2,041,642	+		ABIE40_RS10540	0.39	+1.2
2,041,643	-		ABIE40_RS10540	0.39	+1.2
2,041,643	-		ABIE40_RS10540	0.39	+0.7
2,041,643	-		ABIE40_RS10540	0.39	+0.4
2,041,667	-		ABIE40_RS10540	0.41	+1.7
2,041,667	-		ABIE40_RS10540	0.41	-0.1