Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS06575

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
1,285,838	+				-0.4
1,285,838	+				+2.1
1,285,856	+				+0.3
1,286,631	+				+0.7
1,286,633	+				-0.8
1,286,633	+				-1.2
1,287,052	+		ABIE40_RS06575	0.17	-0.1
1,287,053	-		ABIE40_RS06575	0.17	-0.5
1,287,053	-		ABIE40_RS06575	0.17	-0.3
1,287,053	-		ABIE40_RS06575	0.17	-3.4
1,287,053	-		ABIE40_RS06575	0.17	-2.2
1,287,053	-		ABIE40_RS06575	0.17	-1.0
1,287,053	-		ABIE40_RS06575	0.17	-1.6
1,287,332	-		ABIE40_RS06575	0.30	-2.4
1,287,332	-		ABIE40_RS06575	0.30	-0.9
1,287,676	+		ABIE40_RS06575	0.46	-1.9
1,287,677	-		ABIE40_RS06575	0.46	-1.9
1,287,677	-		ABIE40_RS06575	0.46	-2.2
1,287,766	+		ABIE40_RS06575	0.50	-0.2
1,287,766	+		ABIE40_RS06575	0.50	-2.3
1,287,767	-		ABIE40_RS06575	0.50	-2.4
1,287,848	-		ABIE40_RS06575	0.53	-2.9
1,287,980	+		ABIE40_RS06575	0.59	-0.3
1,287,980	+		ABIE40_RS06575	0.59	-1.3
1,288,073	+		ABIE40_RS06575	0.64	-2.4
1,288,073	+		ABIE40_RS06575	0.64	-2.3
1,288,074	-		ABIE40_RS06575	0.64	-1.5
1,288,081	+		ABIE40_RS06575	0.64	-3.6
1,288,081	+		ABIE40_RS06575	0.64	-2.4
1,288,081	+		ABIE40_RS06575	0.64	-3.1
1,288,081	+		ABIE40_RS06575	0.64	-1.9
1,288,082	-		ABIE40_RS06575	0.64	-2.1
1,288,082	-		ABIE40_RS06575	0.64	-3.0
1,288,082	-		ABIE40_RS06575	0.64	-0.9
1,288,082	-		ABIE40_RS06575	0.64	-2.3
1,288,082	-		ABIE40_RS06575	0.64	-3.1
1,288,105	+		ABIE40_RS06575	0.65	-2.4
1,288,105	+		ABIE40_RS06575	0.65	-0.9
1,288,105	+		ABIE40_RS06575	0.65	-1.8
1,288,105	+		ABIE40_RS06575	0.65	-2.2
1,288,105	+		ABIE40_RS06575	0.65	-0.3
1,288,106	-		ABIE40_RS06575	0.65	-1.9
1,288,106	-		ABIE40_RS06575	0.65	-3.4
1,288,106	-		ABIE40_RS06575	0.65	-1.4
1,288,106	-		ABIE40_RS06575	0.65	-1.9
1,288,106	-		ABIE40_RS06575	0.65	-1.6
1,288,129	+		ABIE40_RS06575	0.66	-1.0
1,288,129	+		ABIE40_RS06575	0.66	-1.5
1,288,130	-		ABIE40_RS06575	0.66	-3.4
1,288,185	+		ABIE40_RS06575	0.69	-2.8
1,288,186	-		ABIE40_RS06575	0.69	+0.5
1,288,251	+		ABIE40_RS06575	0.72	-2.6
1,288,251	+		ABIE40_RS06575	0.72	-4.3
1,288,252	-		ABIE40_RS06575	0.72	-0.9
1,288,375	+		ABIE40_RS06575	0.77	-2.7
1,288,377	+		ABIE40_RS06575	0.77	-2.0
1,288,531	+		ABIE40_RS06575	0.84	-1.9
1,288,531	+		ABIE40_RS06575	0.84	-1.6
1,288,561	+		ABIE40_RS06575	0.86	-2.2
1,288,561	+		ABIE40_RS06575	0.86	-1.2
1,288,561	+		ABIE40_RS06575	0.86	-2.2
1,288,562	-		ABIE40_RS06575	0.86	-3.3
1,288,562	-		ABIE40_RS06575	0.86	-2.4
1,288,562	-		ABIE40_RS06575	0.86	-1.4
1,288,563	+		ABIE40_RS06575	0.86	-1.2
1,288,677	+				-0.5
1,288,677	+				-1.7
1,288,678	-				-1.6
1,288,678	-				-0.3
1,288,678	-				-0.1
1,288,700	-				-0.9
1,288,706	+				-2.5
1,288,774	+				+1.2
1,288,774	+				-1.2
1,288,775	-				-0.5
1,288,775	-				-0.8
1,288,873	+				+0.5
1,288,873	+				+0.5
1,288,873	+				+0.7
1,288,976	+				+1.5
1,288,976	+				-1.4
1,288,976	+				+0.5
1,288,976	+				+0.7
1,288,976	+				+0.5
1,288,976	+				+0.3
1,288,976	+				+0.8
1,288,976	+				+1.2
1,288,976	+				-0.7
1,288,976	+				+3.5
1,288,976	+				+0.1
1,288,977	-				+2.2
1,288,977	-				-0.2
1,288,977	-				+2.1
1,288,977	-				+1.8
1,288,977	-				+0.6
1,288,977	-				+1.1
1,288,977	-				+0.2
1,288,977	-				-0.7
1,288,977	-				-0.9
1,288,977	-				+0.4
1,288,977	-				+0.4
1,288,984	+				+2.0
1,288,984	+				+0.8
1,288,984	+				+2.7
1,288,984	+				+1.5
1,288,984	+				+0.8
1,288,984	+				+1.6
1,288,984	+				+0.2
1,288,984	+				-0.4
1,288,985	-				+0.7
1,288,985	-				+0.5
1,288,985	-				+1.1
1,288,985	-				+1.3
1,288,985	-				+1.0
1,288,985	-				-0.2
1,288,985	-				+3.2
1,288,985	-				+1.0
1,288,985	-				+0.6
1,289,147	+		ABIE40_RS06580	0.17	+1.3
1,289,147	+		ABIE40_RS06580	0.17	-0.7
1,289,147	+		ABIE40_RS06580	0.17	+1.1
1,289,147	+		ABIE40_RS06580	0.17	-0.9
1,289,147	+		ABIE40_RS06580	0.17	+1.3
1,289,147	+		ABIE40_RS06580	0.17	+0.6
1,289,147	+		ABIE40_RS06580	0.17	+1.0
1,289,147	+		ABIE40_RS06580	0.17	+1.3
1,289,148	-		ABIE40_RS06580	0.17	+0.3
1,289,148	-		ABIE40_RS06580	0.17	+2.8
1,289,148	-		ABIE40_RS06580	0.17	-1.2
1,289,148	-		ABIE40_RS06580	0.17	+0.2
1,289,148	-		ABIE40_RS06580	0.17	+1.2
1,289,148	-		ABIE40_RS06580	0.17	+1.9
1,289,148	-		ABIE40_RS06580	0.17	+1.1
1,289,148	-		ABIE40_RS06580	0.17	-0.3
1,289,148	-		ABIE40_RS06580	0.17	+2.3
1,289,215	+		ABIE40_RS06580	0.22	+2.4
1,289,216	-		ABIE40_RS06580	0.22	+0.2
1,289,216	-		ABIE40_RS06580	0.22	-0.8
1,289,308	+		ABIE40_RS06580	0.28	+0.0
1,289,414	+		ABIE40_RS06580	0.35	+1.3
1,289,443	+		ABIE40_RS06580	0.37	+1.3
1,289,443	+		ABIE40_RS06580	0.37	-0.0
1,289,444	-		ABIE40_RS06580	0.37	-3.5
1,289,444	-		ABIE40_RS06580	0.37	+0.6
1,289,510	+		ABIE40_RS06580	0.41	+2.3
1,289,510	+		ABIE40_RS06580	0.41	+0.5
1,289,510	+		ABIE40_RS06580	0.41	+0.7
1,289,510	+		ABIE40_RS06580	0.41	+1.5
1,289,510	+		ABIE40_RS06580	0.41	-0.9
1,289,510	+		ABIE40_RS06580	0.41	+0.2
1,289,511	-		ABIE40_RS06580	0.41	-3.2
1,289,511	-		ABIE40_RS06580	0.41	-1.6
1,289,511	-		ABIE40_RS06580	0.41	+1.0
1,289,511	-		ABIE40_RS06580	0.41	-0.4
1,289,511	-		ABIE40_RS06580	0.41	-0.5
1,289,568	-		ABIE40_RS06580	0.45	+2.9
1,289,591	+		ABIE40_RS06580	0.46	+1.2
1,289,592	-		ABIE40_RS06580	0.46	-0.4
1,289,653	+		ABIE40_RS06580	0.50	+1.7
1,289,654	-		ABIE40_RS06580	0.50	+1.1
1,289,789	+		ABIE40_RS06580	0.59	-1.0
1,289,789	+		ABIE40_RS06580	0.59	+2.2
1,289,789	+		ABIE40_RS06580	0.59	+0.1
1,289,790	-		ABIE40_RS06580	0.59	-0.1
1,289,790	-		ABIE40_RS06580	0.59	+0.3
1,289,790	-		ABIE40_RS06580	0.59	-1.1
1,289,790	-		ABIE40_RS06580	0.59	+0.5
1,289,790	-		ABIE40_RS06580	0.59	+0.6
1,289,795	+		ABIE40_RS06580	0.60	+0.2