Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06845 and ABID97_RS06850 overlap by 14 nucleotides ABID97_RS06850 and ABID97_RS06855 are separated by 4 nucleotides
ABID97_RS06845: ABID97_RS06845 - multiple monosaccharide ABC transporter ATP-binding protein, at 1,444,224 to 1,445,780
_RS06845
ABID97_RS06850: ABID97_RS06850 - multiple monosaccharide ABC transporter permease, at 1,445,767 to 1,446,990
_RS06850
ABID97_RS06855: ABID97_RS06855 - sugar ABC transporter ATP-binding protein, at 1,446,995 to 1,448,515
_RS06855
Position (kb) 1445
1446
1447 Strain fitness (log2 ratio) -1
0
1 at 1444.849 kb on + strand, within ABID97_RS06845 at 1444.850 kb on - strand, within ABID97_RS06845 at 1444.850 kb on - strand, within ABID97_RS06845 at 1445.574 kb on + strand, within ABID97_RS06845 at 1445.574 kb on + strand, within ABID97_RS06845 at 1445.667 kb on + strand at 1445.668 kb on - strand at 1446.091 kb on + strand, within ABID97_RS06850 at 1446.451 kb on + strand, within ABID97_RS06850 at 1446.509 kb on - strand, within ABID97_RS06850 at 1446.524 kb on - strand, within ABID97_RS06850 at 1446.574 kb on + strand, within ABID97_RS06850 at 1446.891 kb on + strand at 1446.892 kb on - strand at 1446.988 kb on + strand at 1446.988 kb on + strand at 1446.988 kb on + strand at 1447.442 kb on + strand, within ABID97_RS06855 at 1447.631 kb on + strand, within ABID97_RS06855 at 1447.632 kb on - strand, within ABID97_RS06855
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 1,444,849 + ABID97_RS06845 0.40 +0.1 1,444,850 - ABID97_RS06845 0.40 +0.9 1,444,850 - ABID97_RS06845 0.40 -0.4 1,445,574 + ABID97_RS06845 0.87 +1.6 1,445,574 + ABID97_RS06845 0.87 +0.2 1,445,667 + -0.0 1,445,668 - -0.6 1,446,091 + ABID97_RS06850 0.26 -0.4 1,446,451 + ABID97_RS06850 0.56 +0.9 1,446,509 - ABID97_RS06850 0.61 -0.3 1,446,524 - ABID97_RS06850 0.62 +0.0 1,446,574 + ABID97_RS06850 0.66 -0.3 1,446,891 + +0.0 1,446,892 - -0.4 1,446,988 + +0.4 1,446,988 + +0.6 1,446,988 + -0.5 1,447,442 + ABID97_RS06855 0.29 +0.2 1,447,631 + ABID97_RS06855 0.42 -0.7 1,447,632 - ABID97_RS06855 0.42 -0.3
Or see this region's nucleotide sequence