Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03560 and ABID97_RS03565 are separated by 86 nucleotides ABID97_RS03565 and ABID97_RS03570 are separated by 29 nucleotides
ABID97_RS03560: ABID97_RS03560 - molybdopterin cofactor-binding domain-containing protein, at 726,447 to 730,208
_RS03560
ABID97_RS03565: ABID97_RS03565 - fumarylacetoacetate hydrolase family protein, at 730,295 to 731,482
_RS03565
ABID97_RS03570: ABID97_RS03570 - MFS transporter, at 731,512 to 732,759
_RS03570
Position (kb) 730
731
732 Strain fitness (log2 ratio) -1
0
1 at 729.319 kb on - strand, within ABID97_RS03560 at 729.319 kb on - strand, within ABID97_RS03560 at 729.319 kb on - strand, within ABID97_RS03560 at 729.324 kb on + strand, within ABID97_RS03560 at 729.324 kb on + strand, within ABID97_RS03560 at 729.325 kb on - strand, within ABID97_RS03560 at 729.325 kb on - strand, within ABID97_RS03560 at 729.325 kb on - strand, within ABID97_RS03560 at 729.486 kb on + strand, within ABID97_RS03560 at 729.664 kb on - strand, within ABID97_RS03560 at 729.775 kb on - strand, within ABID97_RS03560 at 730.110 kb on + strand at 731.480 kb on + strand at 731.480 kb on + strand at 731.497 kb on - strand at 731.497 kb on - strand at 731.612 kb on + strand at 731.727 kb on - strand, within ABID97_RS03570 at 731.780 kb on + strand, within ABID97_RS03570 at 731.780 kb on + strand, within ABID97_RS03570 at 731.780 kb on + strand, within ABID97_RS03570 at 731.781 kb on - strand, within ABID97_RS03570 at 731.781 kb on - strand, within ABID97_RS03570 at 731.909 kb on + strand, within ABID97_RS03570 at 731.909 kb on + strand, within ABID97_RS03570 at 732.089 kb on + strand, within ABID97_RS03570 at 732.089 kb on + strand, within ABID97_RS03570 at 732.090 kb on - strand, within ABID97_RS03570 at 732.090 kb on - strand, within ABID97_RS03570 at 732.090 kb on - strand, within ABID97_RS03570 at 732.196 kb on + strand, within ABID97_RS03570 at 732.401 kb on + strand, within ABID97_RS03570 at 732.401 kb on + strand, within ABID97_RS03570 at 732.446 kb on + strand, within ABID97_RS03570 at 732.447 kb on - strand, within ABID97_RS03570
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 729,319 - ABID97_RS03560 0.76 +0.7 729,319 - ABID97_RS03560 0.76 +1.0 729,319 - ABID97_RS03560 0.76 +1.4 729,324 + ABID97_RS03560 0.76 +0.5 729,324 + ABID97_RS03560 0.76 +0.3 729,325 - ABID97_RS03560 0.77 +0.7 729,325 - ABID97_RS03560 0.77 +0.7 729,325 - ABID97_RS03560 0.77 +0.3 729,486 + ABID97_RS03560 0.81 +0.1 729,664 - ABID97_RS03560 0.86 +1.4 729,775 - ABID97_RS03560 0.88 +1.6 730,110 + +1.1 731,480 + +1.2 731,480 + +0.7 731,497 - +0.1 731,497 - -0.6 731,612 + +0.9 731,727 - ABID97_RS03570 0.17 +0.1 731,780 + ABID97_RS03570 0.21 +1.0 731,780 + ABID97_RS03570 0.21 +0.1 731,780 + ABID97_RS03570 0.21 +0.5 731,781 - ABID97_RS03570 0.22 +0.3 731,781 - ABID97_RS03570 0.22 -1.4 731,909 + ABID97_RS03570 0.32 +0.4 731,909 + ABID97_RS03570 0.32 +0.3 732,089 + ABID97_RS03570 0.46 +0.4 732,089 + ABID97_RS03570 0.46 +0.4 732,090 - ABID97_RS03570 0.46 -0.1 732,090 - ABID97_RS03570 0.46 +0.9 732,090 - ABID97_RS03570 0.46 -0.9 732,196 + ABID97_RS03570 0.55 +0.6 732,401 + ABID97_RS03570 0.71 +0.4 732,401 + ABID97_RS03570 0.71 +0.0 732,446 + ABID97_RS03570 0.75 +0.2 732,447 - ABID97_RS03570 0.75 -0.2
Or see this region's nucleotide sequence