Strain Fitness in Serratia liquefaciens MT49 around IAI46_23115

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
4,932,232	-		IAI46_23110	0.49	+0.9
4,932,244	-		IAI46_23110	0.49	-0.2
4,932,255	+		IAI46_23110	0.50	-0.1
4,932,255	+		IAI46_23110	0.50	+0.0
4,932,255	+		IAI46_23110	0.50	+0.1
4,932,300	+		IAI46_23110	0.53	+0.3
4,932,301	-		IAI46_23110	0.53	-0.3
4,932,301	-		IAI46_23110	0.53	-0.3
4,932,342	+		IAI46_23110	0.55	+0.3
4,932,343	-		IAI46_23110	0.55	-0.4
4,932,369	+		IAI46_23110	0.57	+0.2
4,932,369	+		IAI46_23110	0.57	-1.0
4,932,370	-		IAI46_23110	0.57	-0.6
4,932,387	+		IAI46_23110	0.58	-0.9
4,932,387	+		IAI46_23110	0.58	+0.0
4,932,392	-		IAI46_23110	0.58	+1.0
4,932,392	-		IAI46_23110	0.58	-1.1
4,932,397	-		IAI46_23110	0.59	-0.2
4,932,444	-		IAI46_23110	0.61	+0.2
4,932,456	-		IAI46_23110	0.62	-0.1
4,932,459	+		IAI46_23110	0.62	-0.0
4,932,472	+		IAI46_23110	0.63	-0.3
4,932,473	-		IAI46_23110	0.63	+0.3
4,932,473	-		IAI46_23110	0.63	-0.7
4,932,476	+		IAI46_23110	0.63	+0.4
4,932,476	+		IAI46_23110	0.63	+0.0
4,932,476	+		IAI46_23110	0.63	+0.3
4,932,476	+		IAI46_23110	0.63	+0.0
4,932,477	-		IAI46_23110	0.63	-1.6
4,932,477	-		IAI46_23110	0.63	+1.3
4,932,477	-		IAI46_23110	0.63	-0.1
4,932,477	-		IAI46_23110	0.63	+0.5
4,932,477	-		IAI46_23110	0.63	+0.7
4,932,477	-		IAI46_23110	0.63	+0.8
4,932,477	-		IAI46_23110	0.63	+0.6
4,932,696	+		IAI46_23110	0.76	-0.2
4,932,697	-		IAI46_23110	0.76	-0.0
4,932,697	-		IAI46_23110	0.76	+0.6
4,932,726	+		IAI46_23110	0.78	-0.9
4,932,726	+		IAI46_23110	0.78	-0.5
4,932,887	+		IAI46_23110	0.88	-1.0
4,932,888	-		IAI46_23110	0.88	+0.3
4,933,063	+				+0.5
4,933,063	+				+0.2
4,933,080	+				-0.2
4,933,081	-				+0.0
4,933,090	-				+1.0
4,933,120	+				+0.2
4,933,120	+				+1.2
4,933,121	-				-0.6
4,933,121	-				+1.6
4,933,121	-				+0.3
4,933,122	+				+0.5
4,933,122	+				+0.0
4,933,122	+				+0.8
4,933,122	+				-0.0
4,933,123	-				+0.0
4,933,123	-				+0.5
4,933,123	-				+0.1
4,933,123	-				+0.4
4,933,130	+				-0.5
4,933,131	-				+0.0
4,933,131	-				+0.4
4,933,131	-				+0.4
4,933,131	-				+0.6
4,933,131	-				-0.5
4,933,131	-				-1.1
4,933,148	+				+0.2
4,933,149	-				+0.6
4,933,177	+				+0.9
4,933,178	-				-0.8
4,933,301	+				-1.6
4,933,314	-				-0.2
4,933,334	+				+0.4
4,933,335	-				-0.3
4,933,341	+				-0.4
4,933,501	+				+0.8
4,933,501	+				-0.2
4,933,539	+				-0.3
4,933,540	-				-0.7
4,933,587	-				+0.2
4,933,592	+				+0.6
4,933,774	-		IAI46_23115	0.13	-0.3
4,933,834	+		IAI46_23115	0.14	+0.3
4,933,894	+		IAI46_23115	0.16	-0.1
4,933,897	+		IAI46_23115	0.16	+0.6
4,933,898	-		IAI46_23115	0.16	-0.7
4,933,914	+		IAI46_23115	0.16	+0.3
4,933,914	+		IAI46_23115	0.16	+0.3
4,933,914	+		IAI46_23115	0.16	+0.9
4,933,914	+		IAI46_23115	0.16	-0.5
4,933,914	+		IAI46_23115	0.16	-1.4
4,933,914	+		IAI46_23115	0.16	-0.1
4,933,914	+		IAI46_23115	0.16	+0.2
4,933,915	-		IAI46_23115	0.16	-0.3
4,933,915	-		IAI46_23115	0.16	+0.4
4,933,915	-		IAI46_23115	0.16	+0.1
4,933,915	-		IAI46_23115	0.16	+0.1
4,933,915	-		IAI46_23115	0.16	+0.4
4,933,915	-		IAI46_23115	0.16	+0.2
4,933,915	-		IAI46_23115	0.16	+1.3
4,933,915	-		IAI46_23115	0.16	+0.0
4,933,915	-		IAI46_23115	0.16	+0.2
4,933,917	+		IAI46_23115	0.16	+0.1
4,933,917	+		IAI46_23115	0.16	+0.3
4,933,917	+		IAI46_23115	0.16	+0.7
4,933,918	-		IAI46_23115	0.16	-0.1
4,933,918	-		IAI46_23115	0.16	+0.2
4,933,949	+		IAI46_23115	0.17	-0.1
4,933,949	+		IAI46_23115	0.17	-0.1
4,933,950	-		IAI46_23115	0.17	-0.0
4,933,950	-		IAI46_23115	0.17	+0.2
4,933,958	+		IAI46_23115	0.17	-0.4
4,934,029	-		IAI46_23115	0.18	-0.2
4,934,091	+		IAI46_23115	0.20	+0.0
4,934,115	+		IAI46_23115	0.20	+0.1
4,934,116	-		IAI46_23115	0.20	+0.4
4,934,116	-		IAI46_23115	0.20	+0.4
4,934,175	-		IAI46_23115	0.21	+0.9
4,934,193	-		IAI46_23115	0.22	+0.8
4,934,317	-		IAI46_23115	0.24	+0.4
4,934,317	-		IAI46_23115	0.24	-0.2
4,934,546	+		IAI46_23115	0.29	+0.3
4,934,546	+		IAI46_23115	0.29	+0.8
4,934,547	-		IAI46_23115	0.29	+0.1
4,934,659	+		IAI46_23115	0.31	+0.0
4,934,659	+		IAI46_23115	0.31	+0.2
4,934,679	+		IAI46_23115	0.32	+0.1
4,934,769	-		IAI46_23115	0.34	+0.4
4,935,024	-		IAI46_23115	0.39	-0.8
4,935,051	-		IAI46_23115	0.39	-0.2
4,935,159	-		IAI46_23115	0.42	+0.6
4,935,182	+		IAI46_23115	0.42	+0.6
4,935,185	+		IAI46_23115	0.42	+1.6
4,935,185	+		IAI46_23115	0.42	-0.2
4,935,186	-		IAI46_23115	0.42	-0.2
4,935,186	-		IAI46_23115	0.42	+0.2
4,935,186	-		IAI46_23115	0.42	-0.1
4,935,186	-		IAI46_23115	0.42	-0.3
4,935,255	+		IAI46_23115	0.44	+0.6
4,935,282	+		IAI46_23115	0.44	-0.3
4,935,283	-		IAI46_23115	0.44	+0.5
4,935,283	-		IAI46_23115	0.44	+0.6
4,935,296	-		IAI46_23115	0.45	+0.2
4,935,299	+		IAI46_23115	0.45	+1.0
4,935,299	+		IAI46_23115	0.45	+1.0
4,935,300	-		IAI46_23115	0.45	-0.4
4,935,528	+		IAI46_23115	0.49	+0.3
4,935,528	+		IAI46_23115	0.49	+1.0
4,935,529	-		IAI46_23115	0.49	+0.2
4,935,531	+		IAI46_23115	0.49	-0.7
4,935,531	+		IAI46_23115	0.49	+1.2
4,935,531	+		IAI46_23115	0.49	+1.1
4,935,532	-		IAI46_23115	0.49	+0.7
4,935,545	-		IAI46_23115	0.50	-0.1
4,935,545	-		IAI46_23115	0.50	-0.3
4,935,549	-		IAI46_23115	0.50	-0.1
4,935,708	+		IAI46_23115	0.53	-0.3
4,935,709	-		IAI46_23115	0.53	+0.8
4,935,790	+		IAI46_23115	0.55	+0.3
4,935,791	-		IAI46_23115	0.55	-0.0
4,935,962	+		IAI46_23115	0.58	-0.9
4,935,962	+		IAI46_23115	0.58	-0.4
4,935,963	-		IAI46_23115	0.58	-0.5
4,936,012	+		IAI46_23115	0.59	+0.6
4,936,012	+		IAI46_23115	0.59	+0.3
4,936,050	+		IAI46_23115	0.60	+0.3
4,936,050	+		IAI46_23115	0.60	-0.0
4,936,168	-		IAI46_23115	0.63	-0.5
4,936,169	+		IAI46_23115	0.63	-0.8
4,936,169	+		IAI46_23115	0.63	-0.5
4,936,220	+		IAI46_23115	0.64	-0.4
4,936,221	-		IAI46_23115	0.64	+0.9
4,936,312	-		IAI46_23115	0.65	-0.2
4,936,320	-		IAI46_23115	0.66	-0.6
4,936,561	+		IAI46_23115	0.71	-0.1
4,936,561	+		IAI46_23115	0.71	+0.0
4,936,562	-		IAI46_23115	0.71	+1.0
4,936,601	+		IAI46_23115	0.71	-0.1
4,936,602	-		IAI46_23115	0.71	-0.5
4,936,602	-		IAI46_23115	0.71	-0.8
4,936,602	-		IAI46_23115	0.71	+0.5
4,936,654	+		IAI46_23115	0.73	+0.6
4,936,792	+		IAI46_23115	0.75	-0.6
4,936,793	-		IAI46_23115	0.75	-0.6
4,936,793	-		IAI46_23115	0.75	+0.1
4,937,033	+		IAI46_23115	0.80	+0.4
4,937,034	-		IAI46_23115	0.80	-0.4
4,937,053	+		IAI46_23115	0.81	+0.5
4,937,053	+		IAI46_23115	0.81	+1.3
4,937,054	-		IAI46_23115	0.81	+0.8
4,937,054	-		IAI46_23115	0.81	-1.1
4,937,054	-		IAI46_23115	0.81	-0.7
4,937,054	-		IAI46_23115	0.81	+0.3
4,937,054	-		IAI46_23115	0.81	+0.3
4,937,057	+		IAI46_23115	0.81	-0.3
4,937,058	-		IAI46_23115	0.81	+1.2
4,937,081	+		IAI46_23115	0.81	-0.6
4,937,115	-		IAI46_23115	0.82	+1.4
4,937,151	-		IAI46_23115	0.83	-0.7
4,937,180	+		IAI46_23115	0.83	-0.7
4,937,338	+		IAI46_23115	0.87	-0.1
4,937,338	+		IAI46_23115	0.87	+0.5
4,937,338	+		IAI46_23115	0.87	+0.1
4,937,382	-		IAI46_23115	0.88	+0.8
4,937,442	+		IAI46_23115	0.89	+0.2
4,937,442	+		IAI46_23115	0.89	-0.1
4,937,442	+		IAI46_23115	0.89	+0.4
4,937,442	+		IAI46_23115	0.89	-0.6
4,937,443	-		IAI46_23115	0.89	-0.3
4,937,452	+		IAI46_23115	0.89	+0.1
4,937,452	+		IAI46_23115	0.89	-0.3
4,937,662	+				-0.0
4,937,663	-				+0.2
4,937,931	+				+0.2
4,937,931	+				+0.5
4,937,931	+				+0.6
4,937,931	+				+0.5
4,937,932	-				-0.3
4,937,932	-				+0.4
4,937,932	-				-0.1
4,937,932	-				-0.6
4,937,933	+				-0.9
4,937,933	+				-1.8
4,937,934	-				+0.6
4,937,934	-				+0.7
4,937,982	+				+0.4
4,937,982	+				-0.5
4,937,982	+				-0.0
4,937,983	-				-0.4
4,937,983	-				+0.5
4,937,991	+				-0.2
4,937,992	-				-0.8
4,938,022	+				-0.1
4,938,023	-				-0.5
4,938,039	-				+0.7
4,938,086	+				+1.1
4,938,086	+				-0.7
4,938,086	+				-1.2
4,938,087	-				+1.5
4,938,087	-				+0.3
4,938,087	-				+0.5
4,938,087	-				-0.4
4,938,087	-				-0.0
4,938,088	+				+0.7
4,938,088	+				+0.1
4,938,088	+				-0.1
4,938,089	-				+0.4
4,938,089	-				+0.4
4,938,089	-				+0.5
4,938,089	-				+0.3
4,938,089	-				+0.1
4,938,165	-				+0.2
4,938,165	-				+0.2
4,938,165	-				+0.3
4,938,212	-		IAI46_23120	0.12	+0.2
4,938,269	+		IAI46_23120	0.15	+0.4
4,938,270	-		IAI46_23120	0.15	+0.2
4,938,520	+		IAI46_23120	0.30	-0.7
4,938,520	+		IAI46_23120	0.30	+0.7
4,938,521	-		IAI46_23120	0.30	-0.1
4,938,538	+		IAI46_23120	0.31	-1.4
4,938,538	+		IAI46_23120	0.31	-0.8
4,938,539	-		IAI46_23120	0.31	-0.1
4,938,578	+		IAI46_23120	0.34	+0.8
4,938,594	-		IAI46_23120	0.35	+0.8
4,938,647	+		IAI46_23120	0.38	-0.6
4,938,826	+		IAI46_23120	0.49	+0.6
4,938,827	-		IAI46_23120	0.49	+0.2
4,938,827	-		IAI46_23120	0.49	-0.2
4,938,841	+		IAI46_23120	0.50	+0.3
4,938,845	+		IAI46_23120	0.50	+0.6
4,938,895	+		IAI46_23120	0.53	+0.1
4,938,896	-		IAI46_23120	0.53	-0.8