Strain Fitness in Serratia liquefaciens MT49 around IAI46_22815

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
4,858,460	+		IAI46_22810	0.60	+1.0
4,858,461	-		IAI46_22810	0.60	+1.3
4,858,461	-		IAI46_22810	0.60	-0.2
4,858,476	-		IAI46_22810	0.62	+0.3
4,858,621	+		IAI46_22810	0.83	+0.9
4,858,622	-		IAI46_22810	0.83	+0.3
4,858,627	+		IAI46_22810	0.84	+1.0
4,858,628	-		IAI46_22810	0.84	-0.1
4,858,644	+		IAI46_22810	0.86	+0.2
4,858,741	-				+0.6
4,858,763	+				+0.2
4,858,764	-				-0.0
4,858,764	-				+0.1
4,858,810	+				+0.2
4,858,815	+				+0.7
4,858,816	-				+0.1
4,858,816	-				-0.6
4,858,816	-				-0.9
4,858,856	-				-2.3
4,858,921	+				+0.4
4,858,936	+				+0.1
4,859,209	+				+0.1
4,859,381	-				+0.4
4,859,397	+				+0.2
4,859,404	+				-1.3
4,859,413	-				-1.5
4,859,416	+				+0.1
4,859,417	-				+0.1
4,859,463	-				+0.5
4,859,463	-				+0.1
4,859,479	-				-1.2
4,859,479	-				-0.3
4,859,490	+				+0.5
4,859,508	+				+0.3
4,859,528	+				-0.2
4,859,529	-				+1.1
4,859,529	-				+0.6
4,859,530	+				+0.2
4,859,530	+				+1.1
4,859,531	-				+1.3
4,859,545	-				+1.1
4,859,582	-				-0.8
4,859,696	+				-1.6
4,859,697	-				+0.2
4,859,697	-				+0.0
4,859,762	-				+0.2
4,859,771	+				+0.2
4,859,771	+				+0.1
4,859,771	+				-0.1
4,859,772	-				-0.7
4,859,780	+				+0.3
4,859,780	+				+0.1
4,859,830	+				+0.5
4,859,830	+				-0.2
4,859,831	-				-0.3
4,859,831	-				-0.1
4,859,831	-				-0.9
4,859,835	+				+0.2
4,859,835	+				-0.1
4,859,835	+				-0.5
4,859,835	+				+0.8
4,859,836	-				-0.3
4,859,887	-		IAI46_22815	0.11	-0.2
4,859,890	-		IAI46_22815	0.11	+0.6
4,859,896	+		IAI46_22815	0.11	-0.2
4,859,897	-		IAI46_22815	0.11	+0.7
4,859,897	-		IAI46_22815	0.11	+0.7
4,859,914	+		IAI46_22815	0.12	-0.3
4,859,922	+		IAI46_22815	0.12	+0.1
4,859,990	+		IAI46_22815	0.14	+0.1
4,859,991	-		IAI46_22815	0.14	+0.6
4,860,003	+		IAI46_22815	0.14	-0.1
4,860,003	+		IAI46_22815	0.14	+0.0
4,860,004	-		IAI46_22815	0.14	-0.6
4,860,004	-		IAI46_22815	0.14	+0.7
4,860,009	-		IAI46_22815	0.14	+0.2
4,860,083	+		IAI46_22815	0.16	+1.2
4,860,083	+		IAI46_22815	0.16	+0.7
4,860,083	+		IAI46_22815	0.16	+0.1
4,860,083	+		IAI46_22815	0.16	+0.4
4,860,083	+		IAI46_22815	0.16	+0.4
4,860,084	-		IAI46_22815	0.16	+0.0
4,860,101	+		IAI46_22815	0.16	-0.4
4,860,161	+		IAI46_22815	0.18	-0.2
4,860,162	-		IAI46_22815	0.18	-0.4
4,860,162	-		IAI46_22815	0.18	-1.1
4,860,197	-		IAI46_22815	0.19	-2.7
4,860,293	-		IAI46_22815	0.21	+0.5
4,860,405	-		IAI46_22815	0.24	+0.4
4,860,405	-		IAI46_22815	0.24	+0.6
4,860,484	+		IAI46_22815	0.26	+0.7
4,860,484	+		IAI46_22815	0.26	-0.1
4,860,546	+		IAI46_22815	0.28	+0.4
4,860,586	+		IAI46_22815	0.29	-1.8
4,860,586	+		IAI46_22815	0.29	+0.2
4,860,590	+		IAI46_22815	0.29	-0.7
4,860,590	+		IAI46_22815	0.29	+0.2
4,860,590	+		IAI46_22815	0.29	+0.1
4,860,590	+		IAI46_22815	0.29	-1.3
4,860,591	-		IAI46_22815	0.29	+2.2
4,860,591	-		IAI46_22815	0.29	-0.0
4,860,591	-		IAI46_22815	0.29	-1.7
4,860,591	-		IAI46_22815	0.29	-0.8
4,860,591	-		IAI46_22815	0.29	+0.5
4,860,655	+		IAI46_22815	0.30	+0.1
4,860,714	+		IAI46_22815	0.32	+0.4
4,860,714	+		IAI46_22815	0.32	+0.3
4,860,715	-		IAI46_22815	0.32	+0.4
4,860,715	-		IAI46_22815	0.32	+0.6
4,860,715	-		IAI46_22815	0.32	+1.3
4,860,715	-		IAI46_22815	0.32	+0.2
4,860,715	-		IAI46_22815	0.32	-0.0
4,860,715	-		IAI46_22815	0.32	-0.4
4,860,756	+		IAI46_22815	0.33	+0.4
4,860,799	+		IAI46_22815	0.34	+0.9
4,860,799	+		IAI46_22815	0.34	-0.3
4,860,800	-		IAI46_22815	0.34	-1.6
4,860,800	-		IAI46_22815	0.34	-0.5
4,860,887	+		IAI46_22815	0.36	+0.1
4,860,888	-		IAI46_22815	0.36	+1.3
4,860,888	-		IAI46_22815	0.36	-1.1
4,860,903	+		IAI46_22815	0.37	+0.5
4,860,903	+		IAI46_22815	0.37	+0.9
4,860,903	+		IAI46_22815	0.37	-0.2
4,860,904	-		IAI46_22815	0.37	-0.1
4,860,904	-		IAI46_22815	0.37	+0.1
4,860,904	-		IAI46_22815	0.37	+0.0
4,860,904	-		IAI46_22815	0.37	+0.3
4,860,908	+		IAI46_22815	0.37	+0.8
4,860,967	-		IAI46_22815	0.38	-0.4
4,860,967	-		IAI46_22815	0.38	+0.1
4,860,967	-		IAI46_22815	0.38	-1.1
4,861,028	+		IAI46_22815	0.40	+0.9
4,861,029	-		IAI46_22815	0.40	-0.9
4,861,029	-		IAI46_22815	0.40	+1.3
4,861,055	+		IAI46_22815	0.41	-0.2
4,861,056	-		IAI46_22815	0.41	+0.6
4,861,077	-		IAI46_22815	0.41	+1.7
4,861,099	+		IAI46_22815	0.42	+0.2
4,861,207	+		IAI46_22815	0.44	+0.9
4,861,207	+		IAI46_22815	0.44	-0.3
4,861,207	+		IAI46_22815	0.44	+0.9
4,861,208	-		IAI46_22815	0.44	-0.3
4,861,280	+		IAI46_22815	0.46	-0.9
4,861,281	-		IAI46_22815	0.46	+0.3
4,861,281	-		IAI46_22815	0.46	+0.1
4,861,289	+		IAI46_22815	0.47	+0.6
4,861,290	-		IAI46_22815	0.47	-1.8
4,861,291	+		IAI46_22815	0.47	+1.0
4,861,292	-		IAI46_22815	0.47	-0.8
4,861,377	-		IAI46_22815	0.49	+0.5
4,861,401	+		IAI46_22815	0.49	+0.2
4,861,401	+		IAI46_22815	0.49	-0.9
4,861,402	-		IAI46_22815	0.49	+0.1
4,861,402	-		IAI46_22815	0.49	+0.2
4,861,402	-		IAI46_22815	0.49	-0.3
4,861,514	+		IAI46_22815	0.52	-0.7
4,861,515	-		IAI46_22815	0.52	+1.3
4,861,703	+		IAI46_22815	0.57	+1.1
4,861,704	-		IAI46_22815	0.57	+0.3
4,861,712	+		IAI46_22815	0.57	+0.9
4,861,712	+		IAI46_22815	0.57	+0.0
4,861,712	+		IAI46_22815	0.57	+0.2
4,861,734	+		IAI46_22815	0.58	+0.0
4,861,735	-		IAI46_22815	0.58	+0.1
4,861,735	-		IAI46_22815	0.58	+0.3
4,861,735	-		IAI46_22815	0.58	+0.3
4,861,819	+		IAI46_22815	0.60	-1.0
4,861,836	+		IAI46_22815	0.60	+0.4
4,861,837	-		IAI46_22815	0.60	+0.3
4,861,837	-		IAI46_22815	0.60	+0.6
4,861,906	+		IAI46_22815	0.62	-0.0
4,861,907	-		IAI46_22815	0.62	-0.5
4,861,907	-		IAI46_22815	0.62	+0.7
4,861,951	+		IAI46_22815	0.63	-0.1
4,861,952	-		IAI46_22815	0.63	+0.1
4,861,979	-		IAI46_22815	0.64	-0.0
4,862,025	-		IAI46_22815	0.65	+1.3
4,862,064	+		IAI46_22815	0.66	-0.4
4,862,065	-		IAI46_22815	0.66	+0.0
4,862,065	-		IAI46_22815	0.66	-0.1
4,862,068	+		IAI46_22815	0.66	-0.2
4,862,068	+		IAI46_22815	0.66	-0.0
4,862,068	+		IAI46_22815	0.66	+0.7
4,862,068	+		IAI46_22815	0.66	-0.3
4,862,130	+		IAI46_22815	0.68	+0.7
4,862,169	+		IAI46_22815	0.69	+0.7
4,862,170	-		IAI46_22815	0.69	+0.1
4,862,174	+		IAI46_22815	0.69	+0.5
4,862,174	+		IAI46_22815	0.69	+0.3
4,862,174	+		IAI46_22815	0.69	+0.0
4,862,174	+		IAI46_22815	0.69	-2.0
4,862,174	+		IAI46_22815	0.69	-0.2
4,862,174	+		IAI46_22815	0.69	-0.2
4,862,175	-		IAI46_22815	0.69	+0.3
4,862,175	-		IAI46_22815	0.69	+0.1
4,862,175	-		IAI46_22815	0.69	+0.7
4,862,175	-		IAI46_22815	0.69	-0.9
4,862,249	-		IAI46_22815	0.71	+0.5
4,862,249	-		IAI46_22815	0.71	-0.1
4,862,296	+		IAI46_22815	0.72	+0.6
4,862,529	+		IAI46_22815	0.78	+1.0
4,862,614	+		IAI46_22815	0.80	-0.0
4,862,714	-		IAI46_22815	0.83	+0.2
4,862,750	-		IAI46_22815	0.84	-0.5
4,862,753	+		IAI46_22815	0.84	+1.1
4,862,753	+		IAI46_22815	0.84	+0.5
4,862,753	+		IAI46_22815	0.84	-0.6
4,862,754	-		IAI46_22815	0.84	+0.9
4,862,810	+		IAI46_22815	0.85	-0.3
4,862,810	+		IAI46_22815	0.85	-0.9
4,862,810	+		IAI46_22815	0.85	+0.0
4,862,811	-		IAI46_22815	0.85	+0.3
4,862,811	-		IAI46_22815	0.85	-0.2
4,862,811	-		IAI46_22815	0.85	-0.2
4,862,822	-		IAI46_22815	0.85	-0.5
4,862,861	+		IAI46_22815	0.86	+1.2
4,862,861	+		IAI46_22815	0.86	-0.1
4,862,861	+		IAI46_22815	0.86	-0.3
4,862,861	+		IAI46_22815	0.86	-0.7
4,862,861	+		IAI46_22815	0.86	-0.5
4,862,861	+		IAI46_22815	0.86	-0.2
4,862,862	-		IAI46_22815	0.86	+0.1
4,862,862	-		IAI46_22815	0.86	-1.1
4,862,862	-		IAI46_22815	0.86	+0.2
4,862,862	-		IAI46_22815	0.86	-0.8
4,862,862	-		IAI46_22815	0.86	-1.8
4,862,862	-		IAI46_22815	0.86	+0.3
4,862,864	+		IAI46_22815	0.86	-0.3
4,862,864	+		IAI46_22815	0.86	+0.1
4,863,001	+		IAI46_22815	0.90	-0.1
4,863,123	+				-1.3
4,863,123	+				+0.1
4,863,123	+				+0.4
4,863,124	-				+0.8
4,863,208	+				-0.0
4,863,268	+				-0.6
4,863,268	+				+0.1
4,863,268	+				-0.3
4,863,269	-				+0.2
4,863,288	+				+0.2
4,863,289	-				-0.2
4,863,304	+				-0.1
4,863,304	+				+1.4
4,863,304	+				-0.7
4,863,317	-				-0.4
4,863,362	-				+0.7
4,863,451	+				-0.3
4,863,869	-		IAI46_22820	0.63	+0.6
4,863,920	+		IAI46_22820	0.71	-0.3
4,863,921	-		IAI46_22820	0.71	-1.2
4,863,921	-		IAI46_22820	0.71	-0.5
4,863,927	-		IAI46_22820	0.72	+0.3
4,863,927	-		IAI46_22820	0.72	+0.5
4,863,927	-		IAI46_22820	0.72	+0.1
4,863,927	-		IAI46_22820	0.72	+0.4
4,863,951	+		IAI46_22820	0.75	+0.1
4,863,952	-		IAI46_22820	0.76	+0.0
4,863,952	-		IAI46_22820	0.76	+0.2
4,863,952	-		IAI46_22820	0.76	-1.9
4,863,967	+		IAI46_22820	0.78	+0.3
4,863,967	+		IAI46_22820	0.78	+0.2
4,863,967	+		IAI46_22820	0.78	-0.4
4,863,967	+		IAI46_22820	0.78	-0.4
4,863,968	-		IAI46_22820	0.78	+0.3
4,864,033	+		IAI46_22820	0.87	+0.7
4,864,033	+		IAI46_22820	0.87	+0.6
4,864,034	-		IAI46_22820	0.87	+0.7
4,864,034	-		IAI46_22820	0.87	-0.3
4,864,068	+				+0.1
4,864,068	+				+1.8
4,864,068	+				+0.1
4,864,109	-				+0.6
4,864,157	+		IAI46_22825	0.10	-0.5
4,864,158	-		IAI46_22825	0.11	+0.2
4,864,198	-		IAI46_22825	0.20	-0.0
4,864,249	-		IAI46_22825	0.32	+0.4
4,864,261	+		IAI46_22825	0.35	+0.3
4,864,261	+		IAI46_22825	0.35	+0.9
4,864,261	+		IAI46_22825	0.35	-2.0
4,864,261	+		IAI46_22825	0.35	+0.3
4,864,262	-		IAI46_22825	0.35	+0.3
4,864,262	-		IAI46_22825	0.35	+0.1
4,864,262	-		IAI46_22825	0.35	-0.8