Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17670 and IAI46_17675 are separated by 13 nucleotides IAI46_17675 and IAI46_17680 are separated by 14 nucleotides IAI46_17680 and IAI46_17685 overlap by 4 nucleotides
IAI46_17670: IAI46_17670 - NADH-quinone oxidoreductase subunit J, at 3,723,481 to 3,724,041
_17670
IAI46_17675: IAI46_17675 - NADH-quinone oxidoreductase subunit NuoI, at 3,724,055 to 3,724,597
_17675
IAI46_17680: IAI46_17680 - NADH-quinone oxidoreductase subunit NuoH, at 3,724,612 to 3,725,589
_17680
IAI46_17685: IAI46_17685 - NADH-quinone oxidoreductase subunit NuoG, at 3,725,586 to 3,728,324
_17685
Position (kb)
3724
3725
3726 Strain fitness (log2 ratio)
-1
0
1 at 3723.632 kb on + strand, within IAI46_17670 at 3723.633 kb on - strand, within IAI46_17670 at 3723.633 kb on - strand, within IAI46_17670 at 3723.867 kb on - strand, within IAI46_17670 at 3723.950 kb on + strand, within IAI46_17670 at 3723.976 kb on - strand, within IAI46_17670 at 3724.025 kb on + strand at 3724.154 kb on - strand, within IAI46_17675 at 3724.264 kb on + strand, within IAI46_17675 at 3724.264 kb on + strand, within IAI46_17675 at 3724.415 kb on + strand, within IAI46_17675 at 3724.415 kb on + strand, within IAI46_17675 at 3724.501 kb on - strand, within IAI46_17675 at 3724.538 kb on + strand, within IAI46_17675 at 3724.539 kb on - strand, within IAI46_17675 at 3724.539 kb on - strand, within IAI46_17675 at 3724.580 kb on + strand at 3724.614 kb on - strand at 3724.700 kb on - strand at 3724.866 kb on - strand, within IAI46_17680 at 3724.866 kb on - strand, within IAI46_17680 at 3725.168 kb on + strand, within IAI46_17680 at 3725.207 kb on + strand, within IAI46_17680 at 3725.542 kb on - strand at 3725.797 kb on + strand at 3725.798 kb on - strand at 3725.798 kb on - strand at 3725.810 kb on + strand at 3725.810 kb on + strand at 3725.866 kb on + strand, within IAI46_17685 at 3725.870 kb on - strand, within IAI46_17685 at 3725.870 kb on - strand, within IAI46_17685 at 3726.333 kb on - strand, within IAI46_17685 at 3726.335 kb on - strand, within IAI46_17685 at 3726.335 kb on - strand, within IAI46_17685 at 3726.379 kb on - strand, within IAI46_17685 at 3726.410 kb on - strand, within IAI46_17685 at 3726.410 kb on - strand, within IAI46_17685 at 3726.424 kb on + strand, within IAI46_17685 at 3726.425 kb on - strand, within IAI46_17685
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 3,723,632 + IAI46_17670 0.27 +0.1 3,723,633 - IAI46_17670 0.27 -0.5 3,723,633 - IAI46_17670 0.27 -0.2 3,723,867 - IAI46_17670 0.69 +1.5 3,723,950 + IAI46_17670 0.84 +0.4 3,723,976 - IAI46_17670 0.88 +0.3 3,724,025 + -1.6 3,724,154 - IAI46_17675 0.18 -0.3 3,724,264 + IAI46_17675 0.38 +0.0 3,724,264 + IAI46_17675 0.38 -0.4 3,724,415 + IAI46_17675 0.66 +1.1 3,724,415 + IAI46_17675 0.66 +0.5 3,724,501 - IAI46_17675 0.82 +1.4 3,724,538 + IAI46_17675 0.89 -0.9 3,724,539 - IAI46_17675 0.89 -0.5 3,724,539 - IAI46_17675 0.89 -0.5 3,724,580 + -1.6 3,724,614 - +0.7 3,724,700 - -0.1 3,724,866 - IAI46_17680 0.26 -1.6 3,724,866 - IAI46_17680 0.26 +1.4 3,725,168 + IAI46_17680 0.57 -0.7 3,725,207 + IAI46_17680 0.61 -0.9 3,725,542 - +0.7 3,725,797 + -0.2 3,725,798 - +0.9 3,725,798 - -1.0 3,725,810 + -0.5 3,725,810 + +1.2 3,725,866 + IAI46_17685 0.10 -0.9 3,725,870 - IAI46_17685 0.10 +0.0 3,725,870 - IAI46_17685 0.10 +0.1 3,726,333 - IAI46_17685 0.27 +0.9 3,726,335 - IAI46_17685 0.27 +1.0 3,726,335 - IAI46_17685 0.27 +1.2 3,726,379 - IAI46_17685 0.29 -0.9 3,726,410 - IAI46_17685 0.30 +0.8 3,726,410 - IAI46_17685 0.30 +0.4 3,726,424 + IAI46_17685 0.31 -1.7 3,726,425 - IAI46_17685 0.31 -0.2
Or see this region's nucleotide sequence