Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02800 and IAI46_02805 are separated by 14 nucleotides IAI46_02805 and IAI46_02810 overlap by 23 nucleotides IAI46_02810 and IAI46_02815 overlap by 4 nucleotides
IAI46_02800: IAI46_02800 - L-fuconate dehydratase, at 602,585 to 603,862
_02800
IAI46_02805: IAI46_02805 - amidohydrolase family protein, at 603,877 to 604,740
_02805
IAI46_02810: IAI46_02810 - SDR family oxidoreductase, at 604,718 to 605,494
_02810
IAI46_02815: IAI46_02815 - L-rhamnose mutarotase, at 605,491 to 605,850
_02815
Position (kb) 603
604
605 Strain fitness (log2 ratio) -1
0
1
2 at 603.052 kb on + strand, within IAI46_02800 at 603.143 kb on + strand, within IAI46_02800 at 603.143 kb on + strand, within IAI46_02800 at 603.144 kb on - strand, within IAI46_02800 at 603.144 kb on - strand, within IAI46_02800 at 603.144 kb on - strand, within IAI46_02800 at 603.144 kb on - strand, within IAI46_02800 at 603.502 kb on + strand, within IAI46_02800 at 603.541 kb on - strand, within IAI46_02800 at 603.611 kb on + strand, within IAI46_02800 at 603.611 kb on + strand, within IAI46_02800 at 603.611 kb on + strand, within IAI46_02800 at 603.612 kb on - strand, within IAI46_02800 at 603.659 kb on + strand, within IAI46_02800 at 603.686 kb on + strand, within IAI46_02800 at 603.687 kb on - strand, within IAI46_02800 at 603.687 kb on - strand, within IAI46_02800 at 603.687 kb on - strand, within IAI46_02800 at 603.688 kb on + strand, within IAI46_02800 at 603.785 kb on + strand at 603.785 kb on + strand at 603.785 kb on + strand at 603.785 kb on + strand at 603.785 kb on + strand at 603.786 kb on - strand at 603.788 kb on - strand at 603.845 kb on + strand at 603.904 kb on + strand at 603.904 kb on + strand at 603.904 kb on + strand at 603.905 kb on - strand at 603.914 kb on - strand at 603.914 kb on - strand at 604.285 kb on + strand, within IAI46_02805 at 604.286 kb on - strand, within IAI46_02805 at 604.352 kb on - strand, within IAI46_02805 at 604.361 kb on + strand, within IAI46_02805 at 604.362 kb on - strand, within IAI46_02805 at 604.470 kb on + strand, within IAI46_02805 at 604.470 kb on + strand, within IAI46_02805 at 604.471 kb on - strand, within IAI46_02805 at 604.604 kb on - strand, within IAI46_02805 at 604.604 kb on - strand, within IAI46_02805 at 604.615 kb on + strand, within IAI46_02805 at 604.697 kb on - strand at 604.727 kb on + strand at 604.727 kb on + strand at 604.728 kb on - strand at 604.728 kb on - strand at 604.738 kb on + strand at 604.739 kb on - strand at 604.739 kb on - strand at 604.867 kb on - strand, within IAI46_02810 at 604.909 kb on - strand, within IAI46_02810 at 604.984 kb on + strand, within IAI46_02810 at 605.066 kb on + strand, within IAI46_02810 at 605.067 kb on - strand, within IAI46_02810 at 605.067 kb on - strand, within IAI46_02810 at 605.067 kb on - strand, within IAI46_02810 at 605.069 kb on + strand, within IAI46_02810 at 605.289 kb on - strand, within IAI46_02810 at 605.306 kb on - strand, within IAI46_02810 at 605.466 kb on - strand at 605.589 kb on + strand, within IAI46_02815 at 605.648 kb on - strand, within IAI46_02815 at 605.685 kb on + strand, within IAI46_02815 at 605.685 kb on + strand, within IAI46_02815 at 605.685 kb on + strand, within IAI46_02815 at 605.686 kb on - strand, within IAI46_02815
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 603,052 + IAI46_02800 0.37 +1.4 603,143 + IAI46_02800 0.44 +0.5 603,143 + IAI46_02800 0.44 +1.2 603,144 - IAI46_02800 0.44 +0.0 603,144 - IAI46_02800 0.44 +1.8 603,144 - IAI46_02800 0.44 -0.1 603,144 - IAI46_02800 0.44 +0.7 603,502 + IAI46_02800 0.72 -0.5 603,541 - IAI46_02800 0.75 -0.1 603,611 + IAI46_02800 0.80 +0.7 603,611 + IAI46_02800 0.80 +0.7 603,611 + IAI46_02800 0.80 +0.2 603,612 - IAI46_02800 0.80 +0.7 603,659 + IAI46_02800 0.84 +0.3 603,686 + IAI46_02800 0.86 -0.7 603,687 - IAI46_02800 0.86 -0.7 603,687 - IAI46_02800 0.86 +1.2 603,687 - IAI46_02800 0.86 +0.1 603,688 + IAI46_02800 0.86 -0.7 603,785 + +0.1 603,785 + +0.2 603,785 + +0.4 603,785 + +0.3 603,785 + +0.8 603,786 - +0.2 603,788 - +0.2 603,845 + +0.0 603,904 + -1.6 603,904 + +0.4 603,904 + -0.3 603,905 - +0.2 603,914 - +0.7 603,914 - -0.6 604,285 + IAI46_02805 0.47 -0.6 604,286 - IAI46_02805 0.47 -0.5 604,352 - IAI46_02805 0.55 -1.1 604,361 + IAI46_02805 0.56 +0.2 604,362 - IAI46_02805 0.56 +0.7 604,470 + IAI46_02805 0.69 -0.4 604,470 + IAI46_02805 0.69 -0.2 604,471 - IAI46_02805 0.69 +1.8 604,604 - IAI46_02805 0.84 +0.0 604,604 - IAI46_02805 0.84 +0.8 604,615 + IAI46_02805 0.85 -0.0 604,697 - +0.4 604,727 + +1.2 604,727 + +0.2 604,728 - -0.0 604,728 - -0.2 604,738 + -0.2 604,739 - +0.2 604,739 - +0.2 604,867 - IAI46_02810 0.19 -0.5 604,909 - IAI46_02810 0.25 -0.2 604,984 + IAI46_02810 0.34 -0.3 605,066 + IAI46_02810 0.45 +0.2 605,067 - IAI46_02810 0.45 -0.8 605,067 - IAI46_02810 0.45 -0.3 605,067 - IAI46_02810 0.45 +0.7 605,069 + IAI46_02810 0.45 +0.3 605,289 - IAI46_02810 0.73 +0.7 605,306 - IAI46_02810 0.76 -0.5 605,466 - +0.5 605,589 + IAI46_02815 0.27 +0.2 605,648 - IAI46_02815 0.44 -0.2 605,685 + IAI46_02815 0.54 -0.4 605,685 + IAI46_02815 0.54 -0.1 605,685 + IAI46_02815 0.54 -0.1 605,686 - IAI46_02815 0.54 +0.1
Or see this region's nucleotide sequence