Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2944 and Echvi_2945 are separated by 98 nucleotides Echvi_2945 and Echvi_2946 are separated by 6 nucleotides
Echvi_2944: Echvi_2944 - cation diffusion facilitator family transporter, at 3,521,911 to 3,522,834
_2944
Echvi_2945: Echvi_2945 - Domain of unknown function (DUF1905)., at 3,522,933 to 3,523,445
_2945
Echvi_2946: Echvi_2946 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 3,523,452 to 3,524,459
_2946
Position (kb)
3522
3523
3524 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3521.990 kb on - strand at 3522.007 kb on - strand, within Echvi_2944 at 3522.007 kb on - strand, within Echvi_2944 at 3522.082 kb on + strand, within Echvi_2944 at 3522.141 kb on + strand, within Echvi_2944 at 3522.141 kb on + strand, within Echvi_2944 at 3522.141 kb on + strand, within Echvi_2944 at 3522.141 kb on + strand, within Echvi_2944 at 3522.141 kb on + strand, within Echvi_2944 at 3522.142 kb on - strand, within Echvi_2944 at 3522.142 kb on - strand, within Echvi_2944 at 3522.142 kb on - strand, within Echvi_2944 at 3522.145 kb on + strand, within Echvi_2944 at 3522.279 kb on + strand, within Echvi_2944 at 3522.281 kb on + strand, within Echvi_2944 at 3522.281 kb on + strand, within Echvi_2944 at 3522.282 kb on - strand, within Echvi_2944 at 3522.282 kb on - strand, within Echvi_2944 at 3522.282 kb on - strand, within Echvi_2944 at 3522.318 kb on - strand, within Echvi_2944 at 3522.376 kb on + strand, within Echvi_2944 at 3522.377 kb on - strand, within Echvi_2944 at 3522.464 kb on - strand, within Echvi_2944 at 3522.542 kb on - strand, within Echvi_2944 at 3522.546 kb on + strand, within Echvi_2944 at 3522.571 kb on + strand, within Echvi_2944 at 3522.580 kb on + strand, within Echvi_2944 at 3522.611 kb on + strand, within Echvi_2944 at 3522.621 kb on + strand, within Echvi_2944 at 3522.627 kb on + strand, within Echvi_2944 at 3522.627 kb on + strand, within Echvi_2944 at 3522.717 kb on + strand, within Echvi_2944 at 3522.726 kb on + strand, within Echvi_2944 at 3522.727 kb on - strand, within Echvi_2944 at 3522.727 kb on - strand, within Echvi_2944 at 3522.727 kb on - strand, within Echvi_2944 at 3522.729 kb on + strand, within Echvi_2944 at 3522.729 kb on + strand, within Echvi_2944 at 3522.737 kb on + strand, within Echvi_2944 at 3522.737 kb on + strand, within Echvi_2944 at 3522.738 kb on - strand, within Echvi_2944 at 3522.738 kb on - strand, within Echvi_2944 at 3522.738 kb on - strand, within Echvi_2944 at 3522.738 kb on - strand, within Echvi_2944 at 3522.839 kb on + strand at 3522.869 kb on - strand at 3522.884 kb on + strand at 3522.910 kb on + strand at 3522.953 kb on - strand at 3522.999 kb on + strand, within Echvi_2945 at 3523.000 kb on - strand, within Echvi_2945 at 3523.017 kb on + strand, within Echvi_2945 at 3523.018 kb on - strand, within Echvi_2945 at 3523.144 kb on - strand, within Echvi_2945 at 3523.370 kb on + strand, within Echvi_2945 at 3523.499 kb on + strand at 3523.500 kb on - strand at 3523.541 kb on + strand at 3523.932 kb on - strand, within Echvi_2946 at 3524.317 kb on + strand, within Echvi_2946 at 3524.346 kb on - strand, within Echvi_2946 at 3524.402 kb on + strand at 3524.402 kb on + strand at 3524.403 kb on - strand at 3524.406 kb on + strand at 3524.407 kb on - strand at 3524.407 kb on - strand at 3524.407 kb on - strand at 3524.410 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 3,521,990 - -1.4 3,522,007 - Echvi_2944 0.10 -2.1 3,522,007 - Echvi_2944 0.10 -0.8 3,522,082 + Echvi_2944 0.19 +0.6 3,522,141 + Echvi_2944 0.25 +0.3 3,522,141 + Echvi_2944 0.25 -0.3 3,522,141 + Echvi_2944 0.25 +0.2 3,522,141 + Echvi_2944 0.25 -0.0 3,522,141 + Echvi_2944 0.25 -0.1 3,522,142 - Echvi_2944 0.25 -0.1 3,522,142 - Echvi_2944 0.25 -0.5 3,522,142 - Echvi_2944 0.25 -0.6 3,522,145 + Echvi_2944 0.25 -1.1 3,522,279 + Echvi_2944 0.40 -0.0 3,522,281 + Echvi_2944 0.40 -0.2 3,522,281 + Echvi_2944 0.40 +1.0 3,522,282 - Echvi_2944 0.40 +1.0 3,522,282 - Echvi_2944 0.40 -0.4 3,522,282 - Echvi_2944 0.40 +1.4 3,522,318 - Echvi_2944 0.44 -0.2 3,522,376 + Echvi_2944 0.50 +0.1 3,522,377 - Echvi_2944 0.50 -0.6 3,522,464 - Echvi_2944 0.60 -0.5 3,522,542 - Echvi_2944 0.68 -0.4 3,522,546 + Echvi_2944 0.69 -0.0 3,522,571 + Echvi_2944 0.71 +0.3 3,522,580 + Echvi_2944 0.72 +1.3 3,522,611 + Echvi_2944 0.76 -1.2 3,522,621 + Echvi_2944 0.77 +0.7 3,522,627 + Echvi_2944 0.77 -0.3 3,522,627 + Echvi_2944 0.77 +0.6 3,522,717 + Echvi_2944 0.87 +0.6 3,522,726 + Echvi_2944 0.88 +0.5 3,522,727 - Echvi_2944 0.88 -0.8 3,522,727 - Echvi_2944 0.88 +0.3 3,522,727 - Echvi_2944 0.88 -0.8 3,522,729 + Echvi_2944 0.89 +0.9 3,522,729 + Echvi_2944 0.89 -0.2 3,522,737 + Echvi_2944 0.89 +0.1 3,522,737 + Echvi_2944 0.89 -1.2 3,522,738 - Echvi_2944 0.90 -2.5 3,522,738 - Echvi_2944 0.90 +0.8 3,522,738 - Echvi_2944 0.90 +0.7 3,522,738 - Echvi_2944 0.90 +2.2 3,522,839 + +1.0 3,522,869 - +0.9 3,522,884 + -0.2 3,522,910 + -0.6 3,522,953 - +1.2 3,522,999 + Echvi_2945 0.13 -0.4 3,523,000 - Echvi_2945 0.13 +0.6 3,523,017 + Echvi_2945 0.16 +0.4 3,523,018 - Echvi_2945 0.17 +1.5 3,523,144 - Echvi_2945 0.41 +0.5 3,523,370 + Echvi_2945 0.85 +0.2 3,523,499 + -0.9 3,523,500 - +0.2 3,523,541 + -0.6 3,523,932 - Echvi_2946 0.48 -1.6 3,524,317 + Echvi_2946 0.86 +0.7 3,524,346 - Echvi_2946 0.89 +1.4 3,524,402 + +0.1 3,524,402 + -1.8 3,524,403 - -1.5 3,524,406 + -0.5 3,524,407 - -1.1 3,524,407 - +0.3 3,524,407 - -0.4 3,524,410 + -2.2
Or see this region's nucleotide sequence