Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1202 and Echvi_1203 are separated by 363 nucleotides Echvi_1203 and Echvi_1204 are separated by 72 nucleotides
Echvi_1202: Echvi_1202 - Thiol:disulfide interchange protein, at 1,378,764 to 1,380,893
_1202
Echvi_1203: Echvi_1203 - Predicted membrane protein, at 1,381,257 to 1,382,243
_1203
Echvi_1204: Echvi_1204 - Transcriptional regulator, at 1,382,316 to 1,383,209
_1204
Position (kb)
1381
1382
1383 Strain fitness (log2 ratio)
-2
-1
0
1 at 1380.942 kb on + strand at 1380.943 kb on - strand at 1380.960 kb on + strand at 1380.960 kb on + strand at 1380.960 kb on + strand at 1380.960 kb on + strand at 1380.960 kb on + strand at 1380.960 kb on + strand at 1380.961 kb on - strand at 1380.961 kb on - strand at 1380.961 kb on - strand at 1380.963 kb on - strand at 1381.000 kb on + strand at 1381.001 kb on - strand at 1381.002 kb on + strand at 1381.005 kb on - strand at 1381.079 kb on + strand at 1381.080 kb on - strand at 1381.080 kb on - strand at 1381.080 kb on - strand at 1381.080 kb on - strand at 1381.080 kb on - strand at 1381.114 kb on + strand at 1381.115 kb on - strand at 1381.126 kb on - strand at 1381.126 kb on - strand at 1381.195 kb on + strand at 1381.196 kb on - strand at 1381.196 kb on - strand at 1381.196 kb on - strand at 1381.206 kb on + strand at 1381.206 kb on + strand at 1381.306 kb on - strand at 1381.306 kb on - strand at 1381.310 kb on + strand at 1381.332 kb on + strand at 1381.332 kb on + strand at 1381.333 kb on - strand at 1381.495 kb on + strand, within Echvi_1203 at 1381.496 kb on - strand, within Echvi_1203 at 1381.496 kb on - strand, within Echvi_1203 at 1381.500 kb on + strand, within Echvi_1203 at 1381.501 kb on - strand, within Echvi_1203 at 1381.559 kb on + strand, within Echvi_1203 at 1381.560 kb on - strand, within Echvi_1203 at 1381.560 kb on - strand, within Echvi_1203 at 1381.764 kb on + strand, within Echvi_1203 at 1381.854 kb on + strand, within Echvi_1203 at 1382.026 kb on + strand, within Echvi_1203 at 1382.027 kb on - strand, within Echvi_1203 at 1382.027 kb on - strand, within Echvi_1203 at 1382.068 kb on - strand, within Echvi_1203 at 1382.083 kb on - strand, within Echvi_1203 at 1382.083 kb on - strand, within Echvi_1203 at 1382.204 kb on + strand at 1382.205 kb on - strand at 1382.205 kb on - strand at 1382.258 kb on - strand at 1382.394 kb on + strand at 1382.471 kb on + strand, within Echvi_1204 at 1382.512 kb on + strand, within Echvi_1204 at 1382.650 kb on - strand, within Echvi_1204 at 1382.729 kb on + strand, within Echvi_1204 at 1382.825 kb on + strand, within Echvi_1204 at 1382.828 kb on + strand, within Echvi_1204 at 1382.828 kb on + strand, within Echvi_1204 at 1382.828 kb on + strand, within Echvi_1204 at 1382.886 kb on - strand, within Echvi_1204 at 1382.886 kb on - strand, within Echvi_1204 at 1382.899 kb on + strand, within Echvi_1204 at 1382.987 kb on - strand, within Echvi_1204 at 1383.045 kb on + strand, within Echvi_1204 at 1383.045 kb on + strand, within Echvi_1204 at 1383.082 kb on + strand, within Echvi_1204 at 1383.104 kb on + strand, within Echvi_1204 at 1383.104 kb on + strand, within Echvi_1204 at 1383.104 kb on + strand, within Echvi_1204 at 1383.134 kb on - strand at 1383.179 kb on + strand at 1383.198 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 1,380,942 + +0.3 1,380,943 - -0.0 1,380,960 + -0.5 1,380,960 + -0.1 1,380,960 + -0.9 1,380,960 + -2.1 1,380,960 + -0.5 1,380,960 + +1.3 1,380,961 - -1.2 1,380,961 - -0.5 1,380,961 - +0.8 1,380,963 - +0.3 1,381,000 + -0.2 1,381,001 - -1.1 1,381,002 + -0.2 1,381,005 - -1.6 1,381,079 + +0.6 1,381,080 - +0.9 1,381,080 - -0.3 1,381,080 - -1.0 1,381,080 - +0.3 1,381,080 - -0.1 1,381,114 + +1.5 1,381,115 - -0.1 1,381,126 - +0.3 1,381,126 - +1.1 1,381,195 + +0.2 1,381,196 - +0.1 1,381,196 - -0.4 1,381,196 - -0.2 1,381,206 + -0.1 1,381,206 + +0.3 1,381,306 - -0.3 1,381,306 - -0.8 1,381,310 + -1.5 1,381,332 + +1.4 1,381,332 + -0.3 1,381,333 - -0.9 1,381,495 + Echvi_1203 0.24 -0.6 1,381,496 - Echvi_1203 0.24 -0.6 1,381,496 - Echvi_1203 0.24 -1.4 1,381,500 + Echvi_1203 0.25 +0.0 1,381,501 - Echvi_1203 0.25 +0.4 1,381,559 + Echvi_1203 0.31 -0.7 1,381,560 - Echvi_1203 0.31 -0.3 1,381,560 - Echvi_1203 0.31 -0.3 1,381,764 + Echvi_1203 0.51 +0.0 1,381,854 + Echvi_1203 0.60 +0.3 1,382,026 + Echvi_1203 0.78 -0.5 1,382,027 - Echvi_1203 0.78 -0.4 1,382,027 - Echvi_1203 0.78 +0.8 1,382,068 - Echvi_1203 0.82 -1.1 1,382,083 - Echvi_1203 0.84 +1.1 1,382,083 - Echvi_1203 0.84 +0.2 1,382,204 + +0.1 1,382,205 - +0.4 1,382,205 - -1.2 1,382,258 - +1.1 1,382,394 + +0.8 1,382,471 + Echvi_1204 0.17 -1.1 1,382,512 + Echvi_1204 0.22 -1.6 1,382,650 - Echvi_1204 0.37 +0.2 1,382,729 + Echvi_1204 0.46 +0.5 1,382,825 + Echvi_1204 0.57 +0.2 1,382,828 + Echvi_1204 0.57 -1.1 1,382,828 + Echvi_1204 0.57 +0.2 1,382,828 + Echvi_1204 0.57 -0.5 1,382,886 - Echvi_1204 0.64 -0.4 1,382,886 - Echvi_1204 0.64 -0.8 1,382,899 + Echvi_1204 0.65 -1.5 1,382,987 - Echvi_1204 0.75 +0.4 1,383,045 + Echvi_1204 0.82 -0.3 1,383,045 + Echvi_1204 0.82 -0.5 1,383,082 + Echvi_1204 0.86 -0.2 1,383,104 + Echvi_1204 0.88 -0.0 1,383,104 + Echvi_1204 0.88 -0.1 1,383,104 + Echvi_1204 0.88 +0.3 1,383,134 - +0.5 1,383,179 + +0.3 1,383,198 - -0.7
Or see this region's nucleotide sequence