Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0904 and Echvi_0905 are separated by 64 nucleotides Echvi_0905 and Echvi_0906 are separated by 16 nucleotides Echvi_0906 and Echvi_0907 are separated by 7 nucleotides Echvi_0907 and Echvi_0908 are separated by 758 nucleotides
Echvi_0904: Echvi_0904 - conserved hypothetical protein, at 1,030,759 to 1,031,634
_0904
Echvi_0905: Echvi_0905 - hypothetical protein, at 1,031,699 to 1,031,842
_0905
Echvi_0906: Echvi_0906 - ferrous iron transporter FeoB, at 1,031,859 to 1,033,991
_0906
Echvi_0907: Echvi_0907 - Fe2+ transport system protein A, at 1,033,999 to 1,034,223
_0907
Echvi_0908: Echvi_0908 - Beta-xylosidase, at 1,034,982 to 1,036,817
_0908
Position (kb)
1031
1032
1033
1034 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1031.017 kb on + strand, within Echvi_0904 at 1031.019 kb on + strand, within Echvi_0904 at 1031.042 kb on + strand, within Echvi_0904 at 1031.042 kb on + strand, within Echvi_0904 at 1031.057 kb on - strand, within Echvi_0904 at 1031.063 kb on + strand, within Echvi_0904 at 1031.063 kb on + strand, within Echvi_0904 at 1031.063 kb on + strand, within Echvi_0904 at 1031.063 kb on + strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.064 kb on - strand, within Echvi_0904 at 1031.065 kb on + strand, within Echvi_0904 at 1031.074 kb on - strand, within Echvi_0904 at 1031.143 kb on - strand, within Echvi_0904 at 1031.307 kb on + strand, within Echvi_0904 at 1031.307 kb on + strand, within Echvi_0904 at 1031.307 kb on + strand, within Echvi_0904 at 1031.307 kb on + strand, within Echvi_0904 at 1031.308 kb on - strand, within Echvi_0904 at 1031.308 kb on - strand, within Echvi_0904 at 1031.308 kb on - strand, within Echvi_0904 at 1031.316 kb on + strand, within Echvi_0904 at 1031.326 kb on + strand, within Echvi_0904 at 1031.328 kb on + strand, within Echvi_0904 at 1031.328 kb on + strand, within Echvi_0904 at 1031.328 kb on + strand, within Echvi_0904 at 1031.329 kb on - strand, within Echvi_0904 at 1031.329 kb on - strand, within Echvi_0904 at 1031.375 kb on + strand, within Echvi_0904 at 1031.442 kb on - strand, within Echvi_0904 at 1031.493 kb on + strand, within Echvi_0904 at 1031.493 kb on + strand, within Echvi_0904 at 1031.493 kb on + strand, within Echvi_0904 at 1031.509 kb on + strand, within Echvi_0904 at 1031.509 kb on + strand, within Echvi_0904 at 1031.509 kb on + strand, within Echvi_0904 at 1031.509 kb on + strand, within Echvi_0904 at 1031.510 kb on - strand, within Echvi_0904 at 1031.510 kb on - strand, within Echvi_0904 at 1031.510 kb on - strand, within Echvi_0904 at 1031.511 kb on + strand, within Echvi_0904 at 1031.512 kb on - strand, within Echvi_0904 at 1031.512 kb on - strand, within Echvi_0904 at 1031.512 kb on - strand, within Echvi_0904 at 1031.512 kb on - strand, within Echvi_0904 at 1031.512 kb on - strand, within Echvi_0904 at 1031.512 kb on - strand, within Echvi_0904 at 1031.512 kb on - strand, within Echvi_0904 at 1031.550 kb on - strand at 1031.632 kb on + strand at 1031.787 kb on - strand, within Echvi_0905 at 1031.828 kb on - strand at 1031.843 kb on - strand at 1031.861 kb on - strand at 1031.881 kb on - strand at 1034.224 kb on - strand at 1034.258 kb on + strand at 1034.259 kb on - strand at 1034.299 kb on + strand at 1034.300 kb on - strand at 1034.363 kb on + strand at 1034.471 kb on + strand at 1034.471 kb on + strand at 1034.490 kb on + strand at 1034.490 kb on + strand at 1034.491 kb on - strand at 1034.501 kb on + strand at 1034.502 kb on - strand at 1034.502 kb on - strand at 1034.586 kb on + strand at 1034.586 kb on + strand at 1034.587 kb on - strand at 1034.587 kb on - strand at 1034.637 kb on - strand at 1034.663 kb on - strand at 1034.663 kb on - strand at 1034.696 kb on - strand at 1034.696 kb on - strand at 1034.752 kb on - strand at 1034.755 kb on - strand at 1034.789 kb on + strand at 1034.789 kb on + strand at 1034.789 kb on + strand at 1034.790 kb on - strand at 1034.790 kb on - strand at 1034.790 kb on - strand at 1034.790 kb on - strand at 1034.800 kb on + strand at 1034.914 kb on + strand at 1034.987 kb on + strand at 1034.987 kb on + strand at 1034.987 kb on + strand at 1034.987 kb on + strand at 1034.987 kb on + strand at 1034.988 kb on - strand at 1034.988 kb on - strand at 1034.988 kb on - strand at 1034.988 kb on - strand at 1034.988 kb on - strand at 1034.988 kb on - strand at 1034.988 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 1,031,017 + Echvi_0904 0.29 -1.2 1,031,019 + Echvi_0904 0.30 +0.7 1,031,042 + Echvi_0904 0.32 +1.6 1,031,042 + Echvi_0904 0.32 +2.5 1,031,057 - Echvi_0904 0.34 +0.2 1,031,063 + Echvi_0904 0.35 +2.0 1,031,063 + Echvi_0904 0.35 +1.6 1,031,063 + Echvi_0904 0.35 +1.5 1,031,063 + Echvi_0904 0.35 +1.3 1,031,064 - Echvi_0904 0.35 +1.2 1,031,064 - Echvi_0904 0.35 -0.1 1,031,064 - Echvi_0904 0.35 -0.7 1,031,064 - Echvi_0904 0.35 +0.4 1,031,064 - Echvi_0904 0.35 -0.5 1,031,064 - Echvi_0904 0.35 +0.5 1,031,064 - Echvi_0904 0.35 -0.5 1,031,064 - Echvi_0904 0.35 +0.4 1,031,064 - Echvi_0904 0.35 +0.2 1,031,065 + Echvi_0904 0.35 +2.3 1,031,074 - Echvi_0904 0.36 +0.2 1,031,143 - Echvi_0904 0.44 +0.6 1,031,307 + Echvi_0904 0.63 -0.2 1,031,307 + Echvi_0904 0.63 +1.4 1,031,307 + Echvi_0904 0.63 +1.0 1,031,307 + Echvi_0904 0.63 +1.9 1,031,308 - Echvi_0904 0.63 +0.3 1,031,308 - Echvi_0904 0.63 +0.7 1,031,308 - Echvi_0904 0.63 -0.1 1,031,316 + Echvi_0904 0.64 +1.1 1,031,326 + Echvi_0904 0.65 +1.3 1,031,328 + Echvi_0904 0.65 +1.4 1,031,328 + Echvi_0904 0.65 +0.6 1,031,328 + Echvi_0904 0.65 +1.7 1,031,329 - Echvi_0904 0.65 +0.9 1,031,329 - Echvi_0904 0.65 -0.8 1,031,375 + Echvi_0904 0.70 +2.0 1,031,442 - Echvi_0904 0.78 +1.8 1,031,493 + Echvi_0904 0.84 +1.2 1,031,493 + Echvi_0904 0.84 +1.1 1,031,493 + Echvi_0904 0.84 +1.7 1,031,509 + Echvi_0904 0.86 +1.2 1,031,509 + Echvi_0904 0.86 +0.7 1,031,509 + Echvi_0904 0.86 +1.5 1,031,509 + Echvi_0904 0.86 +1.8 1,031,510 - Echvi_0904 0.86 +0.5 1,031,510 - Echvi_0904 0.86 +0.9 1,031,510 - Echvi_0904 0.86 +0.8 1,031,511 + Echvi_0904 0.86 +2.5 1,031,512 - Echvi_0904 0.86 +1.4 1,031,512 - Echvi_0904 0.86 -0.7 1,031,512 - Echvi_0904 0.86 -0.3 1,031,512 - Echvi_0904 0.86 -0.5 1,031,512 - Echvi_0904 0.86 +1.0 1,031,512 - Echvi_0904 0.86 +0.8 1,031,512 - Echvi_0904 0.86 -1.1 1,031,550 - +0.7 1,031,632 + +0.3 1,031,787 - Echvi_0905 0.61 +0.2 1,031,828 - +0.3 1,031,843 - +1.5 1,031,861 - +0.3 1,031,881 - +0.3 1,034,224 - +2.8 1,034,258 + -0.5 1,034,259 - -3.5 1,034,299 + -0.1 1,034,300 - -2.8 1,034,363 + +2.6 1,034,471 + +0.7 1,034,471 + +1.2 1,034,490 + -1.5 1,034,490 + -2.1 1,034,491 - -1.6 1,034,501 + -0.7 1,034,502 - -3.9 1,034,502 - +0.7 1,034,586 + +0.9 1,034,586 + +0.0 1,034,587 - -2.9 1,034,587 - -4.3 1,034,637 - -2.5 1,034,663 - -2.9 1,034,663 - -1.4 1,034,696 - -1.3 1,034,696 - -2.1 1,034,752 - -1.5 1,034,755 - -1.0 1,034,789 + +1.0 1,034,789 + -1.0 1,034,789 + -0.6 1,034,790 - -3.0 1,034,790 - -1.0 1,034,790 - -2.9 1,034,790 - -4.5 1,034,800 + -0.5 1,034,914 + +1.1 1,034,987 + -0.2 1,034,987 + -0.3 1,034,987 + +0.4 1,034,987 + -0.5 1,034,987 + +0.3 1,034,988 - -3.3 1,034,988 - -1.5 1,034,988 - -0.9 1,034,988 - -4.0 1,034,988 - -2.8 1,034,988 - -2.0 1,034,988 - -0.5
Or see this region's nucleotide sequence