Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3610 and EX28DRAFT_3611 are separated by 46 nucleotides EX28DRAFT_3611 and EX28DRAFT_3612 are separated by 635 nucleotides
EX28DRAFT_3610: EX28DRAFT_3610 - Inner membrane protein involved in colicin E2 resistance, at 268,569 to 269,921
_3610
EX28DRAFT_3611: EX28DRAFT_3611 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 269,968 to 270,684
_3611
EX28DRAFT_3612: EX28DRAFT_3612 - RNA methyltransferase, TrmH family, group 1, at 271,320 to 272,006
_3612
Position (kb) 269
270
271 Strain fitness (log2 ratio) -1
0
1
2 at 269.046 kb on - strand, within EX28DRAFT_3610 at 269.216 kb on + strand, within EX28DRAFT_3610 at 269.217 kb on - strand, within EX28DRAFT_3610 at 269.272 kb on - strand, within EX28DRAFT_3610 at 269.272 kb on - strand, within EX28DRAFT_3610 at 269.282 kb on + strand, within EX28DRAFT_3610 at 269.342 kb on + strand, within EX28DRAFT_3610 at 269.343 kb on - strand, within EX28DRAFT_3610 at 269.544 kb on + strand, within EX28DRAFT_3610 at 269.577 kb on + strand, within EX28DRAFT_3610 at 269.578 kb on - strand, within EX28DRAFT_3610 at 269.667 kb on + strand, within EX28DRAFT_3610 at 269.667 kb on + strand, within EX28DRAFT_3610 at 269.667 kb on + strand, within EX28DRAFT_3610 at 269.824 kb on - strand at 269.847 kb on + strand at 269.900 kb on + strand at 269.901 kb on - strand at 269.956 kb on + strand at 269.969 kb on + strand at 270.064 kb on - strand, within EX28DRAFT_3611 at 270.786 kb on - strand at 270.795 kb on - strand at 270.927 kb on - strand at 270.954 kb on - strand at 270.969 kb on - strand at 270.969 kb on - strand at 270.971 kb on - strand at 270.971 kb on - strand at 271.058 kb on + strand at 271.058 kb on + strand at 271.077 kb on - strand at 271.078 kb on + strand at 271.103 kb on - strand at 271.137 kb on + strand at 271.143 kb on + strand at 271.146 kb on + strand at 271.188 kb on + strand at 271.365 kb on - strand at 271.412 kb on - strand, within EX28DRAFT_3612 at 271.412 kb on - strand, within EX28DRAFT_3612 at 271.581 kb on + strand, within EX28DRAFT_3612 at 271.581 kb on + strand, within EX28DRAFT_3612
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 269,046 - EX28DRAFT_3610 0.35 +2.2 269,216 + EX28DRAFT_3610 0.48 +0.4 269,217 - EX28DRAFT_3610 0.48 +0.6 269,272 - EX28DRAFT_3610 0.52 +1.8 269,272 - EX28DRAFT_3610 0.52 -0.8 269,282 + EX28DRAFT_3610 0.53 -0.8 269,342 + EX28DRAFT_3610 0.57 -0.4 269,343 - EX28DRAFT_3610 0.57 +0.1 269,544 + EX28DRAFT_3610 0.72 +0.8 269,577 + EX28DRAFT_3610 0.75 +0.5 269,578 - EX28DRAFT_3610 0.75 -0.1 269,667 + EX28DRAFT_3610 0.81 +0.6 269,667 + EX28DRAFT_3610 0.81 -0.7 269,667 + EX28DRAFT_3610 0.81 +0.1 269,824 - -0.3 269,847 + -0.1 269,900 + +0.4 269,901 - +0.1 269,956 + +0.6 269,969 + -0.2 270,064 - EX28DRAFT_3611 0.13 -0.7 270,786 - +0.6 270,795 - +0.0 270,927 - +0.4 270,954 - -1.2 270,969 - +1.2 270,969 - +0.4 270,971 - +0.1 270,971 - +0.1 271,058 + -0.3 271,058 + -0.2 271,077 - -1.1 271,078 + -0.2 271,103 - +0.3 271,137 + -0.1 271,143 + +0.2 271,146 + -0.6 271,188 + -0.3 271,365 - -1.1 271,412 - EX28DRAFT_3612 0.13 -1.3 271,412 - EX28DRAFT_3612 0.13 +0.4 271,581 + EX28DRAFT_3612 0.38 +0.6 271,581 + EX28DRAFT_3612 0.38 -0.2
Or see this region's nucleotide sequence