Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2959 and EX28DRAFT_2960 overlap by 4 nucleotides EX28DRAFT_2960 and EX28DRAFT_2961 are separated by 25 nucleotides EX28DRAFT_2961 and EX28DRAFT_2962 are separated by 168 nucleotides
EX28DRAFT_2959: EX28DRAFT_2959 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase, at 270,055 to 271,233
_2959
EX28DRAFT_2960: EX28DRAFT_2960 - Xaa-Pro aminopeptidase, at 271,230 to 272,549
_2960
EX28DRAFT_2961: EX28DRAFT_2961 - yecA family protein, at 272,575 to 273,153
_2961
EX28DRAFT_2962: EX28DRAFT_2962 - Uncharacterized protein conserved in bacteria, at 273,322 to 273,651
_2962
Position (kb) 271
272
273 Strain fitness (log2 ratio) -2
-1
0
1
2 at 271.391 kb on - strand, within EX28DRAFT_2960 at 271.470 kb on + strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.757 kb on - strand, within EX28DRAFT_2960 at 271.865 kb on - strand, within EX28DRAFT_2960 at 272.355 kb on - strand, within EX28DRAFT_2960 at 272.355 kb on - strand, within EX28DRAFT_2960 at 272.528 kb on - strand at 272.582 kb on - strand at 272.740 kb on - strand, within EX28DRAFT_2961 at 272.889 kb on - strand, within EX28DRAFT_2961 at 273.125 kb on + strand at 273.147 kb on + strand at 273.148 kb on - strand at 273.189 kb on - strand at 273.189 kb on - strand at 273.231 kb on + strand at 273.231 kb on + strand at 273.248 kb on - strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.253 kb on + strand at 273.253 kb on + strand at 273.254 kb on - strand at 273.285 kb on - strand at 273.508 kb on + strand, within EX28DRAFT_2962 at 273.509 kb on - strand, within EX28DRAFT_2962 at 273.545 kb on - strand, within EX28DRAFT_2962
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 271,391 - EX28DRAFT_2960 0.12 -1.5 271,470 + EX28DRAFT_2960 0.18 -1.4 271,471 - EX28DRAFT_2960 0.18 -0.2 271,471 - EX28DRAFT_2960 0.18 -0.3 271,471 - EX28DRAFT_2960 0.18 -0.6 271,471 - EX28DRAFT_2960 0.18 +0.1 271,757 - EX28DRAFT_2960 0.40 -0.1 271,865 - EX28DRAFT_2960 0.48 +0.1 272,355 - EX28DRAFT_2960 0.85 -0.6 272,355 - EX28DRAFT_2960 0.85 -1.7 272,528 - +0.2 272,582 - -2.0 272,740 - EX28DRAFT_2961 0.28 +0.4 272,889 - EX28DRAFT_2961 0.54 +0.9 273,125 + -0.5 273,147 + +0.6 273,148 - +0.2 273,189 - +1.1 273,189 - -1.8 273,231 + -0.3 273,231 + +0.2 273,248 - -0.1 273,251 + -0.4 273,251 + +0.2 273,251 + +0.4 273,251 + -0.4 273,252 - -0.1 273,252 - +0.6 273,252 - +0.3 273,252 - +0.7 273,252 - -0.1 273,252 - +0.6 273,253 + -0.5 273,253 + +0.6 273,254 - +2.2 273,285 - +0.4 273,508 + EX28DRAFT_2962 0.56 +1.5 273,509 - EX28DRAFT_2962 0.57 -0.2 273,545 - EX28DRAFT_2962 0.68 -0.0
Or see this region's nucleotide sequence