Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2046

Experiment: M9 with casaminos and trichloroethylene 76.3 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2045 and EX28DRAFT_2046 overlap by 1 nucleotidesEX28DRAFT_2046 and EX28DRAFT_2047 are separated by 45 nucleotides EX28DRAFT_2045: EX28DRAFT_2045 - thiol reductant ABC exporter, CydD subunit, at 2,064,532 to 2,066,298 _2045 EX28DRAFT_2046: EX28DRAFT_2046 - thiol reductant ABC exporter, CydC subunit, at 2,066,298 to 2,068,019 _2046 EX28DRAFT_2047: EX28DRAFT_2047 - leucyl/phenylalanyl-tRNA--protein transferase, at 2,068,065 to 2,068,769 _2047 Position (kb) 2066 2067 2068 2069Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2066.316 kb on + strandat 2066.475 kb on - strand, within EX28DRAFT_2046at 2066.589 kb on + strand, within EX28DRAFT_2046at 2067.922 kb on + strandat 2067.947 kb on + strandat 2067.997 kb on - strandat 2068.017 kb on + strandat 2068.018 kb on - strandat 2068.024 kb on + strandat 2068.024 kb on + strandat 2068.024 kb on + strandat 2068.091 kb on + strandat 2068.091 kb on + strandat 2068.092 kb on - strandat 2068.092 kb on - strandat 2068.181 kb on - strand, within EX28DRAFT_2047at 2068.235 kb on - strand, within EX28DRAFT_2047at 2068.235 kb on - strand, within EX28DRAFT_2047at 2068.324 kb on - strand, within EX28DRAFT_2047at 2068.497 kb on + strand, within EX28DRAFT_2047at 2068.800 kb on + strandat 2068.801 kb on - strandat 2068.802 kb on + strandat 2068.802 kb on + strandat 2068.802 kb on + strandat 2068.803 kb on - strandat 2068.803 kb on - strandat 2068.803 kb on - strandat 2068.806 kb on + strandat 2068.881 kb on - strandat 2068.925 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM
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2,066,316 + -1.6
2,066,475 - EX28DRAFT_2046 0.10 -1.9
2,066,589 + EX28DRAFT_2046 0.17 -2.5
2,067,922 + +0.9
2,067,947 + +1.2
2,067,997 - +1.4
2,068,017 + -1.3
2,068,018 - -0.3
2,068,024 + -1.6
2,068,024 + -0.4
2,068,024 + -0.4
2,068,091 + -0.5
2,068,091 + +0.9
2,068,092 - +0.3
2,068,092 - -0.7
2,068,181 - EX28DRAFT_2047 0.16 -0.1
2,068,235 - EX28DRAFT_2047 0.24 +0.2
2,068,235 - EX28DRAFT_2047 0.24 +1.3
2,068,324 - EX28DRAFT_2047 0.37 -0.1
2,068,497 + EX28DRAFT_2047 0.61 -0.3
2,068,800 + +0.3
2,068,801 - +0.4
2,068,802 + -0.5
2,068,802 + -0.6
2,068,802 + +2.9
2,068,803 - +1.9
2,068,803 - +0.2
2,068,803 - +0.0
2,068,806 + +1.2
2,068,881 - -0.3
2,068,925 - -0.2

Or see this region's nucleotide sequence