Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0971 and EX28DRAFT_0972 overlap by 1 nucleotides EX28DRAFT_0972 and EX28DRAFT_0973 overlap by 14 nucleotides EX28DRAFT_0973 and EX28DRAFT_0974 overlap by 4 nucleotides
EX28DRAFT_0971: EX28DRAFT_0971 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 972,905 to 973,897
_0971
EX28DRAFT_0972: EX28DRAFT_0972 - ABC-type antimicrobial peptide transport system, permease component, at 973,897 to 974,787
_0972
EX28DRAFT_0973: EX28DRAFT_0973 - ABC-type antimicrobial peptide transport system, permease component, at 974,774 to 975,739
_0973
EX28DRAFT_0974: EX28DRAFT_0974 - ABC-type oligopeptide transport system, periplasmic component, at 975,736 to 977,376
_0974
Position (kb) 974
975
976 Strain fitness (log2 ratio) -2
-1
0
1 at 974.380 kb on - strand, within EX28DRAFT_0972 at 974.690 kb on - strand, within EX28DRAFT_0972 at 974.690 kb on - strand, within EX28DRAFT_0972 at 974.718 kb on - strand at 974.771 kb on - strand at 974.781 kb on - strand at 974.798 kb on - strand at 974.845 kb on + strand at 975.993 kb on - strand, within EX28DRAFT_0974 at 976.485 kb on - strand, within EX28DRAFT_0974 at 976.492 kb on - strand, within EX28DRAFT_0974 at 976.637 kb on - strand, within EX28DRAFT_0974
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 974,380 - EX28DRAFT_0972 0.54 -2.4 974,690 - EX28DRAFT_0972 0.89 -1.2 974,690 - EX28DRAFT_0972 0.89 -1.4 974,718 - -1.0 974,771 - -0.0 974,781 - -2.0 974,798 - +0.1 974,845 + -1.0 975,993 - EX28DRAFT_0974 0.16 +0.2 976,485 - EX28DRAFT_0974 0.46 +0.9 976,492 - EX28DRAFT_0974 0.46 -0.7 976,637 - EX28DRAFT_0974 0.55 -0.2
Or see this region's nucleotide sequence