Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0860 and EX28DRAFT_0861 are separated by 91 nucleotides EX28DRAFT_0861 and EX28DRAFT_0862 are separated by 200 nucleotides
EX28DRAFT_0860: EX28DRAFT_0860 - Predicted esterase of the alpha-beta hydrolase superfamily, at 871,261 to 872,163
_0860
EX28DRAFT_0861: EX28DRAFT_0861 - Response regulator receiver domain, at 872,255 to 873,268
_0861
EX28DRAFT_0862: EX28DRAFT_0862 - UTP--glucose-1-phosphate uridylyltransferase, at 873,469 to 874,377
_0862
Position (kb) 872
873
874 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 871.333 kb on - strand at 871.361 kb on + strand, within EX28DRAFT_0860 at 871.362 kb on - strand, within EX28DRAFT_0860 at 871.385 kb on + strand, within EX28DRAFT_0860 at 871.385 kb on + strand, within EX28DRAFT_0860 at 871.386 kb on - strand, within EX28DRAFT_0860 at 871.785 kb on - strand, within EX28DRAFT_0860 at 871.953 kb on - strand, within EX28DRAFT_0860 at 872.028 kb on + strand, within EX28DRAFT_0860 at 872.028 kb on + strand, within EX28DRAFT_0860 at 872.035 kb on - strand, within EX28DRAFT_0860 at 872.035 kb on - strand, within EX28DRAFT_0860 at 872.161 kb on + strand at 872.224 kb on + strand at 872.225 kb on - strand at 872.229 kb on - strand at 872.232 kb on + strand at 872.642 kb on - strand, within EX28DRAFT_0861 at 872.833 kb on - strand, within EX28DRAFT_0861 at 872.892 kb on + strand, within EX28DRAFT_0861 at 873.130 kb on + strand, within EX28DRAFT_0861 at 873.130 kb on + strand, within EX28DRAFT_0861 at 873.266 kb on + strand at 873.267 kb on - strand at 873.321 kb on + strand at 873.324 kb on + strand at 873.324 kb on + strand at 873.346 kb on + strand at 873.347 kb on - strand at 873.356 kb on - strand at 873.409 kb on + strand at 873.409 kb on + strand at 873.409 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 871,333 - -0.1 871,361 + EX28DRAFT_0860 0.11 -0.7 871,362 - EX28DRAFT_0860 0.11 -0.3 871,385 + EX28DRAFT_0860 0.14 +0.8 871,385 + EX28DRAFT_0860 0.14 -0.9 871,386 - EX28DRAFT_0860 0.14 -1.2 871,785 - EX28DRAFT_0860 0.58 -0.4 871,953 - EX28DRAFT_0860 0.77 +0.1 872,028 + EX28DRAFT_0860 0.85 -0.3 872,028 + EX28DRAFT_0860 0.85 -0.4 872,035 - EX28DRAFT_0860 0.86 -0.1 872,035 - EX28DRAFT_0860 0.86 +0.6 872,161 + -0.7 872,224 + +0.3 872,225 - -0.8 872,229 - -2.8 872,232 + -0.4 872,642 - EX28DRAFT_0861 0.38 -1.4 872,833 - EX28DRAFT_0861 0.57 -1.0 872,892 + EX28DRAFT_0861 0.63 -2.3 873,130 + EX28DRAFT_0861 0.86 -0.3 873,130 + EX28DRAFT_0861 0.86 -3.1 873,266 + -0.1 873,267 - +0.1 873,321 + -0.2 873,324 + -1.0 873,324 + -1.2 873,346 + +0.3 873,347 - -0.1 873,356 - -0.1 873,409 + -0.4 873,409 + +0.3 873,409 + +0.0
Or see this region's nucleotide sequence