Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13805 and CA264_13810 are separated by 150 nucleotides CA264_13810 and CA264_13815 are separated by 65 nucleotides
CA264_13805: CA264_13805 - sialate O-acetylesterase, at 3,226,195 to 3,228,159
_13805
CA264_13810: CA264_13810 - hypothetical protein, at 3,228,310 to 3,229,764
_13810
CA264_13815: CA264_13815 - hypothetical protein, at 3,229,830 to 3,231,680
_13815
Position (kb)
3228
3229
3230 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3227.323 kb on + strand, within CA264_13805 at 3227.374 kb on + strand, within CA264_13805 at 3227.375 kb on - strand, within CA264_13805 at 3227.391 kb on + strand, within CA264_13805 at 3227.443 kb on + strand, within CA264_13805 at 3227.444 kb on - strand, within CA264_13805 at 3227.473 kb on + strand, within CA264_13805 at 3227.473 kb on + strand, within CA264_13805 at 3227.474 kb on - strand, within CA264_13805 at 3227.482 kb on - strand, within CA264_13805 at 3227.482 kb on - strand, within CA264_13805 at 3227.492 kb on + strand, within CA264_13805 at 3227.493 kb on - strand, within CA264_13805 at 3227.623 kb on + strand, within CA264_13805 at 3227.623 kb on + strand, within CA264_13805 at 3227.726 kb on + strand, within CA264_13805 at 3227.726 kb on + strand, within CA264_13805 at 3227.726 kb on + strand, within CA264_13805 at 3227.750 kb on + strand, within CA264_13805 at 3227.750 kb on + strand, within CA264_13805 at 3227.750 kb on + strand, within CA264_13805 at 3227.949 kb on - strand, within CA264_13805 at 3228.005 kb on + strand at 3228.086 kb on - strand at 3228.086 kb on - strand at 3228.282 kb on - strand at 3228.518 kb on + strand, within CA264_13810 at 3228.519 kb on - strand, within CA264_13810 at 3228.519 kb on - strand, within CA264_13810 at 3228.522 kb on + strand, within CA264_13810 at 3228.522 kb on + strand, within CA264_13810 at 3228.522 kb on + strand, within CA264_13810 at 3228.523 kb on - strand, within CA264_13810 at 3228.523 kb on - strand, within CA264_13810 at 3228.523 kb on - strand, within CA264_13810 at 3228.523 kb on - strand, within CA264_13810 at 3228.560 kb on + strand, within CA264_13810 at 3228.733 kb on + strand, within CA264_13810 at 3228.733 kb on + strand, within CA264_13810 at 3228.904 kb on - strand, within CA264_13810 at 3228.924 kb on - strand, within CA264_13810 at 3228.953 kb on + strand, within CA264_13810 at 3228.954 kb on - strand, within CA264_13810 at 3229.220 kb on + strand, within CA264_13810 at 3229.220 kb on + strand, within CA264_13810 at 3229.220 kb on + strand, within CA264_13810 at 3229.220 kb on + strand, within CA264_13810 at 3229.221 kb on - strand, within CA264_13810 at 3229.288 kb on - strand, within CA264_13810 at 3229.414 kb on + strand, within CA264_13810 at 3229.474 kb on + strand, within CA264_13810 at 3229.474 kb on + strand, within CA264_13810 at 3229.557 kb on + strand, within CA264_13810 at 3229.589 kb on + strand, within CA264_13810 at 3229.699 kb on - strand at 3229.699 kb on - strand at 3229.719 kb on - strand at 3229.763 kb on - strand at 3229.808 kb on + strand at 3229.814 kb on + strand at 3230.265 kb on + strand, within CA264_13815 at 3230.400 kb on - strand, within CA264_13815 at 3230.408 kb on - strand, within CA264_13815 at 3230.522 kb on - strand, within CA264_13815 at 3230.522 kb on - strand, within CA264_13815 at 3230.623 kb on - strand, within CA264_13815 at 3230.623 kb on - strand, within CA264_13815 at 3230.713 kb on - strand, within CA264_13815
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 3,227,323 + CA264_13805 0.57 -0.4 3,227,374 + CA264_13805 0.60 +0.2 3,227,375 - CA264_13805 0.60 -1.3 3,227,391 + CA264_13805 0.61 -0.2 3,227,443 + CA264_13805 0.64 +0.1 3,227,444 - CA264_13805 0.64 -0.5 3,227,473 + CA264_13805 0.65 -0.7 3,227,473 + CA264_13805 0.65 +0.7 3,227,474 - CA264_13805 0.65 +0.5 3,227,482 - CA264_13805 0.65 -0.8 3,227,482 - CA264_13805 0.65 +1.0 3,227,492 + CA264_13805 0.66 -0.6 3,227,493 - CA264_13805 0.66 +0.4 3,227,623 + CA264_13805 0.73 -0.4 3,227,623 + CA264_13805 0.73 -0.2 3,227,726 + CA264_13805 0.78 +0.8 3,227,726 + CA264_13805 0.78 -0.7 3,227,726 + CA264_13805 0.78 -0.4 3,227,750 + CA264_13805 0.79 +0.1 3,227,750 + CA264_13805 0.79 -0.1 3,227,750 + CA264_13805 0.79 -1.0 3,227,949 - CA264_13805 0.89 -1.7 3,228,005 + -0.5 3,228,086 - -0.0 3,228,086 - +0.0 3,228,282 - +0.4 3,228,518 + CA264_13810 0.14 +0.6 3,228,519 - CA264_13810 0.14 -0.8 3,228,519 - CA264_13810 0.14 +1.0 3,228,522 + CA264_13810 0.15 +0.6 3,228,522 + CA264_13810 0.15 -0.0 3,228,522 + CA264_13810 0.15 -1.0 3,228,523 - CA264_13810 0.15 +0.6 3,228,523 - CA264_13810 0.15 +0.9 3,228,523 - CA264_13810 0.15 -0.6 3,228,523 - CA264_13810 0.15 +1.4 3,228,560 + CA264_13810 0.17 +0.6 3,228,733 + CA264_13810 0.29 +0.2 3,228,733 + CA264_13810 0.29 -2.1 3,228,904 - CA264_13810 0.41 -0.0 3,228,924 - CA264_13810 0.42 +0.1 3,228,953 + CA264_13810 0.44 +0.7 3,228,954 - CA264_13810 0.44 +1.0 3,229,220 + CA264_13810 0.63 +0.6 3,229,220 + CA264_13810 0.63 -0.5 3,229,220 + CA264_13810 0.63 +0.1 3,229,220 + CA264_13810 0.63 +0.4 3,229,221 - CA264_13810 0.63 -0.1 3,229,288 - CA264_13810 0.67 +0.3 3,229,414 + CA264_13810 0.76 +0.2 3,229,474 + CA264_13810 0.80 +2.6 3,229,474 + CA264_13810 0.80 +0.1 3,229,557 + CA264_13810 0.86 -0.1 3,229,589 + CA264_13810 0.88 -0.2 3,229,699 - -0.3 3,229,699 - -0.6 3,229,719 - +0.3 3,229,763 - +0.1 3,229,808 + +0.2 3,229,814 + -0.1 3,230,265 + CA264_13815 0.24 +0.1 3,230,400 - CA264_13815 0.31 -0.1 3,230,408 - CA264_13815 0.31 +0.1 3,230,522 - CA264_13815 0.37 +2.0 3,230,522 - CA264_13815 0.37 +0.7 3,230,623 - CA264_13815 0.43 +0.2 3,230,623 - CA264_13815 0.43 -0.1 3,230,713 - CA264_13815 0.48 +0.2
Or see this region's nucleotide sequence