Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10280 and CA264_10285 are separated by 93 nucleotides CA264_10285 and CA264_10290 are separated by 66 nucleotides CA264_10290 and CA264_10295 are separated by 18 nucleotides
CA264_10280: CA264_10280 - hypothetical protein, at 2,389,422 to 2,389,739
_10280
CA264_10285: CA264_10285 - hypothetical protein, at 2,389,833 to 2,390,153
_10285
CA264_10290: CA264_10290 - hypothetical protein, at 2,390,220 to 2,391,650
_10290
CA264_10295: CA264_10295 - SusC/RagA family TonB-linked outer membrane protein, at 2,391,669 to 2,394,872
_10295
Position (kb)
2390
2391
2392 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2389.220 kb on - strand at 2389.274 kb on - strand at 2389.345 kb on + strand at 2389.442 kb on + strand at 2389.495 kb on - strand, within CA264_10280 at 2389.495 kb on - strand, within CA264_10280 at 2389.715 kb on - strand at 2389.718 kb on - strand at 2389.718 kb on - strand at 2389.748 kb on + strand at 2389.749 kb on - strand at 2389.780 kb on + strand at 2389.780 kb on + strand at 2389.781 kb on - strand at 2389.781 kb on - strand at 2389.812 kb on - strand at 2389.812 kb on - strand at 2389.847 kb on + strand at 2389.848 kb on - strand at 2389.953 kb on + strand, within CA264_10285 at 2390.039 kb on + strand, within CA264_10285 at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.277 kb on + strand at 2390.529 kb on + strand, within CA264_10290 at 2390.529 kb on + strand, within CA264_10290 at 2390.530 kb on - strand, within CA264_10290 at 2390.614 kb on + strand, within CA264_10290 at 2390.643 kb on - strand, within CA264_10290 at 2390.700 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290 at 2391.195 kb on + strand, within CA264_10290 at 2391.195 kb on + strand, within CA264_10290 at 2391.655 kb on - strand at 2391.660 kb on - strand at 2391.660 kb on - strand at 2391.682 kb on + strand at 2391.705 kb on + strand at 2391.706 kb on - strand at 2391.707 kb on + strand at 2391.707 kb on + strand at 2391.707 kb on + strand at 2391.707 kb on + strand at 2391.708 kb on - strand at 2391.708 kb on - strand at 2391.842 kb on + strand at 2392.202 kb on + strand, within CA264_10295 at 2392.215 kb on - strand, within CA264_10295 at 2392.224 kb on + strand, within CA264_10295 at 2392.225 kb on - strand, within CA264_10295 at 2392.425 kb on + strand, within CA264_10295 at 2392.425 kb on + strand, within CA264_10295 at 2392.443 kb on - strand, within CA264_10295 at 2392.491 kb on + strand, within CA264_10295 at 2392.492 kb on - strand, within CA264_10295 at 2392.492 kb on - strand, within CA264_10295 at 2392.492 kb on - strand, within CA264_10295 at 2392.493 kb on + strand, within CA264_10295 at 2392.493 kb on + strand, within CA264_10295 at 2392.646 kb on + strand, within CA264_10295 at 2392.647 kb on - strand, within CA264_10295 at 2392.647 kb on - strand, within CA264_10295 at 2392.647 kb on - strand, within CA264_10295 at 2392.650 kb on + strand, within CA264_10295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,389,220 - +0.6 2,389,274 - +0.1 2,389,345 + -0.2 2,389,442 + -1.1 2,389,495 - CA264_10280 0.23 -0.5 2,389,495 - CA264_10280 0.23 +3.1 2,389,715 - -0.8 2,389,718 - +0.1 2,389,718 - -0.2 2,389,748 + -0.7 2,389,749 - +0.4 2,389,780 + +0.1 2,389,780 + -0.5 2,389,781 - -0.6 2,389,781 - -1.1 2,389,812 - +0.4 2,389,812 - +0.5 2,389,847 + -1.2 2,389,848 - +0.0 2,389,953 + CA264_10285 0.37 -0.1 2,390,039 + CA264_10285 0.64 -0.4 2,390,219 + -0.9 2,390,219 + +0.8 2,390,219 + -0.4 2,390,219 + -0.1 2,390,219 + -0.4 2,390,220 - -0.3 2,390,220 - -0.5 2,390,220 - +0.5 2,390,277 + +0.8 2,390,529 + CA264_10290 0.22 +0.1 2,390,529 + CA264_10290 0.22 -0.1 2,390,530 - CA264_10290 0.22 +0.5 2,390,614 + CA264_10290 0.28 +0.5 2,390,643 - CA264_10290 0.30 +0.8 2,390,700 + CA264_10290 0.34 -0.0 2,391,057 + CA264_10290 0.58 -0.2 2,391,057 + CA264_10290 0.58 -0.5 2,391,195 + CA264_10290 0.68 -0.7 2,391,195 + CA264_10290 0.68 +0.5 2,391,655 - -1.2 2,391,660 - -0.3 2,391,660 - +0.8 2,391,682 + -0.6 2,391,705 + +1.0 2,391,706 - +0.1 2,391,707 + -1.3 2,391,707 + -1.1 2,391,707 + +1.1 2,391,707 + +0.5 2,391,708 - -0.9 2,391,708 - -0.9 2,391,842 + -0.1 2,392,202 + CA264_10295 0.17 -0.4 2,392,215 - CA264_10295 0.17 +0.3 2,392,224 + CA264_10295 0.17 +0.1 2,392,225 - CA264_10295 0.17 -0.7 2,392,425 + CA264_10295 0.24 +0.3 2,392,425 + CA264_10295 0.24 -1.6 2,392,443 - CA264_10295 0.24 -0.4 2,392,491 + CA264_10295 0.26 +0.1 2,392,492 - CA264_10295 0.26 -0.7 2,392,492 - CA264_10295 0.26 +0.2 2,392,492 - CA264_10295 0.26 -0.8 2,392,493 + CA264_10295 0.26 +0.8 2,392,493 + CA264_10295 0.26 +0.9 2,392,646 + CA264_10295 0.30 -0.2 2,392,647 - CA264_10295 0.31 -0.3 2,392,647 - CA264_10295 0.31 +0.1 2,392,647 - CA264_10295 0.31 +0.3 2,392,650 + CA264_10295 0.31 -0.4
Or see this region's nucleotide sequence