Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09130 and CA264_09135 are separated by 228 nucleotides CA264_09135 and CA264_09140 are separated by 180 nucleotides
CA264_09130: CA264_09130 - hypothetical protein, at 2,138,661 to 2,140,955
_09130
CA264_09135: CA264_09135 - peptidase S8 and S53 subtilisin kexin sedolisin, at 2,141,184 to 2,142,713
_09135
CA264_09140: CA264_09140 - chloramphenicol acetyltransferase, at 2,142,894 to 2,143,544
_09140
Position (kb)
2141
2142
2143 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2140.199 kb on + strand, within CA264_09130 at 2140.234 kb on - strand, within CA264_09130 at 2140.301 kb on - strand, within CA264_09130 at 2140.421 kb on + strand, within CA264_09130 at 2140.590 kb on + strand, within CA264_09130 at 2140.591 kb on - strand, within CA264_09130 at 2140.639 kb on - strand, within CA264_09130 at 2140.695 kb on + strand, within CA264_09130 at 2140.696 kb on - strand, within CA264_09130 at 2140.756 kb on - strand at 2140.791 kb on - strand at 2140.792 kb on + strand at 2140.793 kb on - strand at 2140.793 kb on - strand at 2140.886 kb on - strand at 2140.987 kb on - strand at 2140.990 kb on + strand at 2141.017 kb on + strand at 2141.017 kb on + strand at 2141.078 kb on + strand at 2141.080 kb on + strand at 2141.083 kb on + strand at 2141.083 kb on + strand at 2141.084 kb on - strand at 2141.209 kb on + strand at 2141.224 kb on + strand at 2141.419 kb on + strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.453 kb on - strand, within CA264_09135 at 2141.468 kb on + strand, within CA264_09135 at 2141.598 kb on + strand, within CA264_09135 at 2141.599 kb on - strand, within CA264_09135 at 2141.639 kb on + strand, within CA264_09135 at 2141.812 kb on + strand, within CA264_09135 at 2141.813 kb on - strand, within CA264_09135 at 2141.833 kb on + strand, within CA264_09135 at 2141.834 kb on - strand, within CA264_09135 at 2142.163 kb on - strand, within CA264_09135 at 2142.163 kb on - strand, within CA264_09135 at 2142.163 kb on - strand, within CA264_09135 at 2142.314 kb on + strand, within CA264_09135 at 2142.317 kb on + strand, within CA264_09135 at 2142.336 kb on - strand, within CA264_09135 at 2142.355 kb on - strand, within CA264_09135 at 2142.396 kb on + strand, within CA264_09135 at 2142.396 kb on + strand, within CA264_09135 at 2142.396 kb on + strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.397 kb on - strand, within CA264_09135 at 2142.400 kb on + strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.401 kb on - strand, within CA264_09135 at 2142.402 kb on + strand, within CA264_09135 at 2142.428 kb on - strand, within CA264_09135 at 2142.445 kb on - strand, within CA264_09135 at 2142.445 kb on - strand, within CA264_09135 at 2142.450 kb on + strand, within CA264_09135 at 2142.451 kb on - strand, within CA264_09135 at 2142.462 kb on + strand, within CA264_09135 at 2142.462 kb on + strand, within CA264_09135 at 2142.463 kb on - strand, within CA264_09135 at 2142.463 kb on - strand, within CA264_09135 at 2142.471 kb on - strand, within CA264_09135 at 2142.507 kb on + strand, within CA264_09135 at 2142.507 kb on + strand, within CA264_09135 at 2142.511 kb on - strand, within CA264_09135 at 2142.511 kb on - strand, within CA264_09135 at 2142.531 kb on - strand, within CA264_09135 at 2142.663 kb on + strand at 2142.663 kb on + strand at 2142.663 kb on + strand at 2142.664 kb on - strand at 2142.664 kb on - strand at 2142.666 kb on + strand at 2142.666 kb on + strand at 2142.723 kb on + strand at 2142.723 kb on + strand at 2142.724 kb on - strand at 2142.724 kb on - strand at 2142.724 kb on - strand at 2142.778 kb on + strand at 2142.798 kb on + strand at 2142.845 kb on - strand at 2142.875 kb on - strand at 2142.882 kb on - strand at 2142.906 kb on + strand at 2142.975 kb on - strand, within CA264_09140 at 2143.006 kb on + strand, within CA264_09140 at 2143.006 kb on + strand, within CA264_09140 at 2143.023 kb on + strand, within CA264_09140 at 2143.024 kb on - strand, within CA264_09140 at 2143.143 kb on + strand, within CA264_09140 at 2143.191 kb on - strand, within CA264_09140 at 2143.290 kb on + strand, within CA264_09140 at 2143.291 kb on - strand, within CA264_09140 at 2143.291 kb on - strand, within CA264_09140 at 2143.297 kb on - strand, within CA264_09140 at 2143.297 kb on - strand, within CA264_09140 at 2143.315 kb on + strand, within CA264_09140 at 2143.367 kb on + strand, within CA264_09140 at 2143.441 kb on + strand, within CA264_09140 at 2143.460 kb on - strand, within CA264_09140 at 2143.509 kb on + strand at 2143.522 kb on + strand at 2143.543 kb on - strand at 2143.551 kb on - strand at 2143.551 kb on - strand at 2143.556 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,140,199 + CA264_09130 0.67 -0.5 2,140,234 - CA264_09130 0.69 -0.1 2,140,301 - CA264_09130 0.71 +0.3 2,140,421 + CA264_09130 0.77 +0.3 2,140,590 + CA264_09130 0.84 -0.3 2,140,591 - CA264_09130 0.84 -1.1 2,140,639 - CA264_09130 0.86 +1.7 2,140,695 + CA264_09130 0.89 -0.2 2,140,696 - CA264_09130 0.89 -0.2 2,140,756 - -0.5 2,140,791 - +0.6 2,140,792 + -0.3 2,140,793 - +0.6 2,140,793 - +0.2 2,140,886 - -0.1 2,140,987 - -0.4 2,140,990 + -0.0 2,141,017 + -0.5 2,141,017 + -0.9 2,141,078 + -0.3 2,141,080 + -1.5 2,141,083 + +0.6 2,141,083 + -0.4 2,141,084 - -0.6 2,141,209 + -1.4 2,141,224 + +0.3 2,141,419 + CA264_09135 0.15 -0.7 2,141,420 - CA264_09135 0.15 +0.5 2,141,420 - CA264_09135 0.15 -0.9 2,141,453 - CA264_09135 0.18 +1.1 2,141,468 + CA264_09135 0.19 -1.4 2,141,598 + CA264_09135 0.27 +0.9 2,141,599 - CA264_09135 0.27 +1.9 2,141,639 + CA264_09135 0.30 +0.7 2,141,812 + CA264_09135 0.41 +0.6 2,141,813 - CA264_09135 0.41 +0.8 2,141,833 + CA264_09135 0.42 -0.3 2,141,834 - CA264_09135 0.42 +0.6 2,142,163 - CA264_09135 0.64 +0.6 2,142,163 - CA264_09135 0.64 -0.8 2,142,163 - CA264_09135 0.64 +1.0 2,142,314 + CA264_09135 0.74 -0.3 2,142,317 + CA264_09135 0.74 +0.1 2,142,336 - CA264_09135 0.75 -0.5 2,142,355 - CA264_09135 0.77 +0.2 2,142,396 + CA264_09135 0.79 +0.3 2,142,396 + CA264_09135 0.79 -0.0 2,142,396 + CA264_09135 0.79 -0.3 2,142,397 - CA264_09135 0.79 +0.7 2,142,397 - CA264_09135 0.79 -0.9 2,142,397 - CA264_09135 0.79 +0.4 2,142,397 - CA264_09135 0.79 -0.4 2,142,397 - CA264_09135 0.79 -0.8 2,142,400 + CA264_09135 0.79 +0.6 2,142,401 - CA264_09135 0.80 +1.2 2,142,401 - CA264_09135 0.80 -0.4 2,142,401 - CA264_09135 0.80 -0.3 2,142,401 - CA264_09135 0.80 +0.1 2,142,402 + CA264_09135 0.80 +0.4 2,142,428 - CA264_09135 0.81 -0.6 2,142,445 - CA264_09135 0.82 +0.3 2,142,445 - CA264_09135 0.82 +0.7 2,142,450 + CA264_09135 0.83 +0.3 2,142,451 - CA264_09135 0.83 -0.3 2,142,462 + CA264_09135 0.84 +0.8 2,142,462 + CA264_09135 0.84 -0.6 2,142,463 - CA264_09135 0.84 -0.9 2,142,463 - CA264_09135 0.84 -0.6 2,142,471 - CA264_09135 0.84 -1.4 2,142,507 + CA264_09135 0.86 -0.1 2,142,507 + CA264_09135 0.86 -0.2 2,142,511 - CA264_09135 0.87 -0.4 2,142,511 - CA264_09135 0.87 +1.0 2,142,531 - CA264_09135 0.88 -0.4 2,142,663 + +0.3 2,142,663 + +0.1 2,142,663 + +0.3 2,142,664 - -0.1 2,142,664 - -0.3 2,142,666 + -0.7 2,142,666 + -1.2 2,142,723 + -0.3 2,142,723 + +0.2 2,142,724 - -0.4 2,142,724 - -0.2 2,142,724 - -0.0 2,142,778 + +0.1 2,142,798 + -0.0 2,142,845 - -0.8 2,142,875 - +1.7 2,142,882 - -0.1 2,142,906 + -0.3 2,142,975 - CA264_09140 0.12 -0.3 2,143,006 + CA264_09140 0.17 -0.0 2,143,006 + CA264_09140 0.17 +1.1 2,143,023 + CA264_09140 0.20 -1.6 2,143,024 - CA264_09140 0.20 +0.9 2,143,143 + CA264_09140 0.38 -0.5 2,143,191 - CA264_09140 0.46 -0.3 2,143,290 + CA264_09140 0.61 +0.0 2,143,291 - CA264_09140 0.61 -0.5 2,143,291 - CA264_09140 0.61 -0.4 2,143,297 - CA264_09140 0.62 +0.6 2,143,297 - CA264_09140 0.62 +1.0 2,143,315 + CA264_09140 0.65 -0.4 2,143,367 + CA264_09140 0.73 +0.1 2,143,441 + CA264_09140 0.84 -0.2 2,143,460 - CA264_09140 0.87 -0.1 2,143,509 + -2.5 2,143,522 + +0.3 2,143,543 - +0.2 2,143,551 - -1.0 2,143,551 - +0.5 2,143,556 + +1.1
Or see this region's nucleotide sequence