Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06270 and CA264_06275 are separated by 131 nucleotides CA264_06275 and CA264_06280 are separated by 910 nucleotides
CA264_06270: CA264_06270 - aspartate aminotransferase, at 1,457,939 to 1,459,195
_06270
CA264_06275: CA264_06275 - chloride channel protein, at 1,459,327 to 1,460,670
_06275
CA264_06280: CA264_06280 - sodium:solute symporter, at 1,461,581 to 1,463,320
_06280
Position (kb)
1459
1460
1461 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1
2 at 1458.370 kb on + strand, within CA264_06270 at 1458.370 kb on + strand, within CA264_06270 at 1458.371 kb on - strand, within CA264_06270 at 1458.403 kb on + strand, within CA264_06270 at 1458.404 kb on - strand, within CA264_06270 at 1458.413 kb on + strand, within CA264_06270 at 1458.434 kb on + strand, within CA264_06270 at 1458.434 kb on + strand, within CA264_06270 at 1458.435 kb on - strand, within CA264_06270 at 1458.435 kb on - strand, within CA264_06270 at 1458.546 kb on - strand, within CA264_06270 at 1458.546 kb on - strand, within CA264_06270 at 1458.603 kb on + strand, within CA264_06270 at 1458.666 kb on + strand, within CA264_06270 at 1458.678 kb on + strand, within CA264_06270 at 1458.687 kb on - strand, within CA264_06270 at 1458.707 kb on + strand, within CA264_06270 at 1458.854 kb on - strand, within CA264_06270 at 1458.854 kb on - strand, within CA264_06270 at 1458.864 kb on + strand, within CA264_06270 at 1458.864 kb on + strand, within CA264_06270 at 1458.865 kb on - strand, within CA264_06270 at 1458.875 kb on + strand, within CA264_06270 at 1458.876 kb on - strand, within CA264_06270 at 1458.945 kb on + strand, within CA264_06270 at 1458.949 kb on - strand, within CA264_06270 at 1458.992 kb on - strand, within CA264_06270 at 1458.992 kb on - strand, within CA264_06270 at 1459.157 kb on - strand at 1459.225 kb on + strand at 1459.243 kb on + strand at 1459.276 kb on + strand at 1459.391 kb on + strand at 1459.431 kb on - strand at 1459.484 kb on + strand, within CA264_06275 at 1459.484 kb on + strand, within CA264_06275 at 1459.533 kb on + strand, within CA264_06275 at 1459.533 kb on + strand, within CA264_06275 at 1459.534 kb on - strand, within CA264_06275 at 1459.646 kb on + strand, within CA264_06275 at 1459.661 kb on - strand, within CA264_06275 at 1459.693 kb on - strand, within CA264_06275 at 1459.785 kb on - strand, within CA264_06275 at 1459.785 kb on - strand, within CA264_06275 at 1459.788 kb on + strand, within CA264_06275 at 1459.788 kb on + strand, within CA264_06275 at 1459.788 kb on + strand, within CA264_06275 at 1459.788 kb on + strand, within CA264_06275 at 1459.788 kb on + strand, within CA264_06275 at 1459.789 kb on - strand, within CA264_06275 at 1459.795 kb on - strand, within CA264_06275 at 1459.795 kb on - strand, within CA264_06275 at 1459.873 kb on - strand, within CA264_06275 at 1459.952 kb on + strand, within CA264_06275 at 1459.953 kb on - strand, within CA264_06275 at 1459.997 kb on + strand, within CA264_06275 at 1459.998 kb on - strand, within CA264_06275 at 1460.031 kb on + strand, within CA264_06275 at 1460.031 kb on + strand, within CA264_06275 at 1460.031 kb on + strand, within CA264_06275 at 1460.033 kb on + strand, within CA264_06275 at 1460.034 kb on - strand, within CA264_06275 at 1460.379 kb on + strand, within CA264_06275 at 1460.379 kb on + strand, within CA264_06275 at 1460.408 kb on + strand, within CA264_06275 at 1460.414 kb on + strand, within CA264_06275 at 1460.425 kb on + strand, within CA264_06275 at 1460.488 kb on + strand, within CA264_06275 at 1460.569 kb on + strand at 1460.576 kb on + strand at 1460.687 kb on + strand at 1460.688 kb on - strand at 1460.688 kb on - strand at 1460.703 kb on + strand at 1460.704 kb on - strand at 1460.705 kb on + strand at 1460.706 kb on - strand at 1460.706 kb on - strand at 1460.764 kb on + strand at 1460.790 kb on - strand at 1460.860 kb on + strand at 1460.963 kb on + strand at 1460.963 kb on + strand at 1461.013 kb on + strand at 1461.015 kb on + strand at 1461.015 kb on + strand at 1461.026 kb on + strand at 1461.027 kb on - strand at 1461.066 kb on - strand at 1461.068 kb on + strand at 1461.069 kb on - strand at 1461.075 kb on - strand at 1461.117 kb on + strand at 1461.117 kb on + strand at 1461.137 kb on - strand at 1461.188 kb on + strand at 1461.237 kb on + strand at 1461.244 kb on - strand at 1461.244 kb on - strand at 1461.272 kb on + strand at 1461.272 kb on + strand at 1461.276 kb on + strand at 1461.277 kb on - strand at 1461.371 kb on + strand at 1461.372 kb on - strand at 1461.372 kb on - strand at 1461.375 kb on - strand at 1461.375 kb on - strand at 1461.379 kb on - strand at 1461.515 kb on + strand at 1461.516 kb on - strand at 1461.535 kb on - strand at 1461.568 kb on - strand at 1461.587 kb on + strand at 1461.587 kb on + strand at 1461.598 kb on - strand at 1461.615 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,458,370 + CA264_06270 0.34 -0.5 1,458,370 + CA264_06270 0.34 -0.2 1,458,371 - CA264_06270 0.34 -0.9 1,458,403 + CA264_06270 0.37 +0.3 1,458,404 - CA264_06270 0.37 -0.2 1,458,413 + CA264_06270 0.38 -0.1 1,458,434 + CA264_06270 0.39 -1.2 1,458,434 + CA264_06270 0.39 -0.5 1,458,435 - CA264_06270 0.39 -0.8 1,458,435 - CA264_06270 0.39 -0.2 1,458,546 - CA264_06270 0.48 +0.6 1,458,546 - CA264_06270 0.48 +0.2 1,458,603 + CA264_06270 0.53 -0.1 1,458,666 + CA264_06270 0.58 -0.4 1,458,678 + CA264_06270 0.59 -0.8 1,458,687 - CA264_06270 0.60 +0.2 1,458,707 + CA264_06270 0.61 -1.0 1,458,854 - CA264_06270 0.73 -0.6 1,458,854 - CA264_06270 0.73 +0.3 1,458,864 + CA264_06270 0.74 -0.2 1,458,864 + CA264_06270 0.74 -0.9 1,458,865 - CA264_06270 0.74 -0.3 1,458,875 + CA264_06270 0.74 +2.2 1,458,876 - CA264_06270 0.75 -0.6 1,458,945 + CA264_06270 0.80 -2.1 1,458,949 - CA264_06270 0.80 +0.2 1,458,992 - CA264_06270 0.84 -0.0 1,458,992 - CA264_06270 0.84 +0.3 1,459,157 - -0.1 1,459,225 + -0.4 1,459,243 + +0.2 1,459,276 + -0.6 1,459,391 + -2.1 1,459,431 - -6.4 1,459,484 + CA264_06275 0.12 -0.8 1,459,484 + CA264_06275 0.12 -7.5 1,459,533 + CA264_06275 0.15 -2.8 1,459,533 + CA264_06275 0.15 -2.9 1,459,534 - CA264_06275 0.15 -2.7 1,459,646 + CA264_06275 0.24 -0.8 1,459,661 - CA264_06275 0.25 -3.1 1,459,693 - CA264_06275 0.27 -1.5 1,459,785 - CA264_06275 0.34 -5.5 1,459,785 - CA264_06275 0.34 -4.0 1,459,788 + CA264_06275 0.34 -3.8 1,459,788 + CA264_06275 0.34 -1.9 1,459,788 + CA264_06275 0.34 -1.4 1,459,788 + CA264_06275 0.34 -3.1 1,459,788 + CA264_06275 0.34 -2.9 1,459,789 - CA264_06275 0.34 -5.8 1,459,795 - CA264_06275 0.35 -1.2 1,459,795 - CA264_06275 0.35 -3.6 1,459,873 - CA264_06275 0.41 -2.6 1,459,952 + CA264_06275 0.47 -0.6 1,459,953 - CA264_06275 0.47 -2.5 1,459,997 + CA264_06275 0.50 -3.0 1,459,998 - CA264_06275 0.50 +0.6 1,460,031 + CA264_06275 0.52 -5.3 1,460,031 + CA264_06275 0.52 -1.9 1,460,031 + CA264_06275 0.52 -5.5 1,460,033 + CA264_06275 0.53 -5.2 1,460,034 - CA264_06275 0.53 -3.7 1,460,379 + CA264_06275 0.78 -6.9 1,460,379 + CA264_06275 0.78 -3.9 1,460,408 + CA264_06275 0.80 -6.3 1,460,414 + CA264_06275 0.81 -0.4 1,460,425 + CA264_06275 0.82 -0.6 1,460,488 + CA264_06275 0.86 -0.4 1,460,569 + -3.5 1,460,576 + +0.2 1,460,687 + +0.4 1,460,688 - -0.7 1,460,688 - +0.8 1,460,703 + +0.1 1,460,704 - -0.0 1,460,705 + +0.3 1,460,706 - -2.0 1,460,706 - +0.7 1,460,764 + +0.1 1,460,790 - -0.0 1,460,860 + +0.2 1,460,963 + +1.8 1,460,963 + +0.3 1,461,013 + -0.5 1,461,015 + +0.9 1,461,015 + +0.3 1,461,026 + -0.2 1,461,027 - -0.5 1,461,066 - +0.5 1,461,068 + -1.0 1,461,069 - +0.1 1,461,075 - +1.0 1,461,117 + -0.5 1,461,117 + -2.0 1,461,137 - +0.2 1,461,188 + -0.1 1,461,237 + +0.4 1,461,244 - +1.0 1,461,244 - +1.4 1,461,272 + +0.1 1,461,272 + +0.8 1,461,276 + -0.3 1,461,277 - -0.0 1,461,371 + -0.7 1,461,372 - -0.1 1,461,372 - +0.9 1,461,375 - -0.7 1,461,375 - +0.0 1,461,379 - -0.1 1,461,515 + -0.6 1,461,516 - -0.4 1,461,535 - -1.7 1,461,568 - +0.2 1,461,587 + -0.8 1,461,587 + -0.5 1,461,598 - -0.2 1,461,615 - -0.5
Or see this region's nucleotide sequence