Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS09720 and ABID97_RS09725 are separated by 2 nucleotides ABID97_RS09725 and ABID97_RS09730 overlap by 8 nucleotides ABID97_RS09730 and ABID97_RS09735 overlap by 4 nucleotides ABID97_RS09735 and ABID97_RS09740 are separated by 82 nucleotides ABID97_RS09740 and ABID97_RS09745 are separated by 1 nucleotides ABID97_RS09745 and ABID97_RS09750 overlap by 4 nucleotides
ABID97_RS09720: ABID97_RS09720 - hypothetical protein, at 2,029,753 to 2,030,421
_RS09720
ABID97_RS09725: ABID97_RS09725 - phage head closure protein, at 2,030,424 to 2,030,798
_RS09725
ABID97_RS09730: ABID97_RS09730 - HK97-gp10 family putative phage morphogenesis protein, at 2,030,791 to 2,031,228
_RS09730
ABID97_RS09735: ABID97_RS09735 - DUF3168 domain-containing protein, at 2,031,225 to 2,031,590
_RS09735
ABID97_RS09740: ABID97_RS09740 - phage tail tube protein, at 2,031,673 to 2,032,323
_RS09740
ABID97_RS09745: ABID97_RS09745 - hypothetical protein, at 2,032,325 to 2,032,552
_RS09745
ABID97_RS09750: ABID97_RS09750 - hypothetical protein, at 2,032,549 to 2,032,911
_RS09750
Position (kb)
2031
2032 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2030.559 kb on + strand, within ABID97_RS09725 at 2030.559 kb on + strand, within ABID97_RS09725 at 2030.560 kb on - strand, within ABID97_RS09725 at 2030.601 kb on + strand, within ABID97_RS09725 at 2030.601 kb on + strand, within ABID97_RS09725 at 2030.796 kb on + strand at 2030.796 kb on + strand at 2030.796 kb on + strand at 2030.797 kb on - strand at 2031.106 kb on + strand, within ABID97_RS09730 at 2031.225 kb on - strand at 2031.246 kb on + strand at 2031.247 kb on - strand at 2031.423 kb on + strand, within ABID97_RS09735 at 2031.423 kb on + strand, within ABID97_RS09735 at 2031.423 kb on + strand, within ABID97_RS09735 at 2031.423 kb on + strand, within ABID97_RS09735 at 2031.424 kb on - strand, within ABID97_RS09735 at 2031.526 kb on - strand, within ABID97_RS09735 at 2031.663 kb on + strand at 2031.868 kb on + strand, within ABID97_RS09740 at 2031.868 kb on + strand, within ABID97_RS09740 at 2031.869 kb on - strand, within ABID97_RS09740 at 2031.938 kb on - strand, within ABID97_RS09740 at 2032.106 kb on - strand, within ABID97_RS09740
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 2,030,559 + ABID97_RS09725 0.36 -0.2 2,030,559 + ABID97_RS09725 0.36 -0.3 2,030,560 - ABID97_RS09725 0.36 -0.4 2,030,601 + ABID97_RS09725 0.47 +0.5 2,030,601 + ABID97_RS09725 0.47 -0.3 2,030,796 + -0.1 2,030,796 + -1.2 2,030,796 + -0.1 2,030,797 - -0.2 2,031,106 + ABID97_RS09730 0.72 -0.6 2,031,225 - +0.0 2,031,246 + +0.7 2,031,247 - -0.4 2,031,423 + ABID97_RS09735 0.54 -0.5 2,031,423 + ABID97_RS09735 0.54 -0.9 2,031,423 + ABID97_RS09735 0.54 -2.6 2,031,423 + ABID97_RS09735 0.54 -0.2 2,031,424 - ABID97_RS09735 0.54 -0.5 2,031,526 - ABID97_RS09735 0.82 -0.5 2,031,663 + -0.1 2,031,868 + ABID97_RS09740 0.30 +0.3 2,031,868 + ABID97_RS09740 0.30 +0.2 2,031,869 - ABID97_RS09740 0.30 +3.7 2,031,938 - ABID97_RS09740 0.41 +0.5 2,032,106 - ABID97_RS09740 0.67 +0.1
Or see this region's nucleotide sequence