Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02425 and ABID97_RS02430 are separated by 76 nucleotides ABID97_RS02430 and ABID97_RS02435 are separated by 19 nucleotides ABID97_RS02435 and ABID97_RS02440 are separated by 74 nucleotides
ABID97_RS02425: ABID97_RS02425 - putative quinol monooxygenase, at 487,029 to 487,337
_RS02425
ABID97_RS02430: ABID97_RS02430 - hypothetical protein, at 487,414 to 488,010
_RS02430
ABID97_RS02435: ABID97_RS02435 - hypothetical protein, at 488,030 to 488,626
_RS02435
ABID97_RS02440: ABID97_RS02440 - type I glyceraldehyde-3-phosphate dehydrogenase, at 488,701 to 489,702
_RS02440
Position (kb) 488
489 Strain fitness (log2 ratio) -1
0
1
2
3 at 487.199 kb on + strand, within ABID97_RS02425 at 487.200 kb on - strand, within ABID97_RS02425 at 487.200 kb on - strand, within ABID97_RS02425 at 487.370 kb on - strand at 487.528 kb on + strand, within ABID97_RS02430 at 487.540 kb on + strand, within ABID97_RS02430 at 487.540 kb on + strand, within ABID97_RS02430 at 487.540 kb on + strand, within ABID97_RS02430 at 487.540 kb on + strand, within ABID97_RS02430 at 487.541 kb on - strand, within ABID97_RS02430 at 487.684 kb on + strand, within ABID97_RS02430 at 487.685 kb on - strand, within ABID97_RS02430 at 487.721 kb on + strand, within ABID97_RS02430 at 487.722 kb on - strand, within ABID97_RS02430 at 487.729 kb on + strand, within ABID97_RS02430 at 487.729 kb on + strand, within ABID97_RS02430 at 487.729 kb on + strand, within ABID97_RS02430 at 487.867 kb on + strand, within ABID97_RS02430 at 487.867 kb on + strand, within ABID97_RS02430 at 487.897 kb on + strand, within ABID97_RS02430 at 487.897 kb on + strand, within ABID97_RS02430 at 487.898 kb on - strand, within ABID97_RS02430 at 487.936 kb on + strand, within ABID97_RS02430 at 487.972 kb on + strand at 487.973 kb on - strand at 488.177 kb on + strand, within ABID97_RS02435 at 488.177 kb on + strand, within ABID97_RS02435 at 488.177 kb on + strand, within ABID97_RS02435 at 488.177 kb on + strand, within ABID97_RS02435 at 488.178 kb on - strand, within ABID97_RS02435 at 488.178 kb on - strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.246 kb on + strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.247 kb on - strand, within ABID97_RS02435 at 488.249 kb on + strand, within ABID97_RS02435 at 488.249 kb on + strand, within ABID97_RS02435 at 488.250 kb on - strand, within ABID97_RS02435 at 488.250 kb on - strand, within ABID97_RS02435 at 488.301 kb on - strand, within ABID97_RS02435 at 488.702 kb on + strand at 488.703 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 487,199 + ABID97_RS02425 0.55 -0.6 487,200 - ABID97_RS02425 0.55 +0.1 487,200 - ABID97_RS02425 0.55 -0.2 487,370 - -0.1 487,528 + ABID97_RS02430 0.19 +0.8 487,540 + ABID97_RS02430 0.21 +0.2 487,540 + ABID97_RS02430 0.21 +0.4 487,540 + ABID97_RS02430 0.21 +0.0 487,540 + ABID97_RS02430 0.21 -0.6 487,541 - ABID97_RS02430 0.21 +2.4 487,684 + ABID97_RS02430 0.45 +0.6 487,685 - ABID97_RS02430 0.45 -0.3 487,721 + ABID97_RS02430 0.51 -0.1 487,722 - ABID97_RS02430 0.52 -0.4 487,729 + ABID97_RS02430 0.53 +0.9 487,729 + ABID97_RS02430 0.53 -0.4 487,729 + ABID97_RS02430 0.53 -0.2 487,867 + ABID97_RS02430 0.76 +1.1 487,867 + ABID97_RS02430 0.76 +0.1 487,897 + ABID97_RS02430 0.81 -1.6 487,897 + ABID97_RS02430 0.81 -0.1 487,898 - ABID97_RS02430 0.81 -0.0 487,936 + ABID97_RS02430 0.87 +0.5 487,972 + +0.0 487,973 - +0.4 488,177 + ABID97_RS02435 0.25 -0.8 488,177 + ABID97_RS02435 0.25 +0.9 488,177 + ABID97_RS02435 0.25 -0.7 488,177 + ABID97_RS02435 0.25 +0.0 488,178 - ABID97_RS02435 0.25 +0.4 488,178 - ABID97_RS02435 0.25 +0.4 488,246 + ABID97_RS02435 0.36 +0.7 488,246 + ABID97_RS02435 0.36 +0.1 488,246 + ABID97_RS02435 0.36 -0.5 488,246 + ABID97_RS02435 0.36 -0.4 488,246 + ABID97_RS02435 0.36 +0.4 488,246 + ABID97_RS02435 0.36 -0.3 488,246 + ABID97_RS02435 0.36 +0.0 488,246 + ABID97_RS02435 0.36 +0.0 488,246 + ABID97_RS02435 0.36 -0.6 488,246 + ABID97_RS02435 0.36 +0.6 488,247 - ABID97_RS02435 0.36 +0.7 488,247 - ABID97_RS02435 0.36 +0.3 488,247 - ABID97_RS02435 0.36 -0.1 488,247 - ABID97_RS02435 0.36 -0.1 488,247 - ABID97_RS02435 0.36 +0.0 488,247 - ABID97_RS02435 0.36 +0.4 488,247 - ABID97_RS02435 0.36 -0.1 488,247 - ABID97_RS02435 0.36 -0.2 488,247 - ABID97_RS02435 0.36 +0.1 488,247 - ABID97_RS02435 0.36 +0.2 488,247 - ABID97_RS02435 0.36 +2.8 488,247 - ABID97_RS02435 0.36 -0.9 488,247 - ABID97_RS02435 0.36 -0.2 488,249 + ABID97_RS02435 0.37 -0.1 488,249 + ABID97_RS02435 0.37 +0.2 488,250 - ABID97_RS02435 0.37 -0.4 488,250 - ABID97_RS02435 0.37 -0.2 488,301 - ABID97_RS02435 0.45 +0.8 488,702 + +0.5 488,703 - +1.3
Or see this region's nucleotide sequence