Strain Fitness in Escherichia coli BW25113 around b0304
Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | L-Malic (C) |
---|---|---|---|---|---|
remove | |||||
316,901 | + | -0.1 | |||
316,911 | - | -0.5 | |||
316,921 | - | -1.5 | |||
316,929 | + | -0.7 | |||
316,975 | - | -0.3 | |||
316,987 | - | -0.3 | |||
317,033 | - | ykgB | b0301 | 0.14 | -0.1 |
317,033 | - | ykgB | b0301 | 0.14 | -2.0 |
317,033 | - | ykgB | b0301 | 0.14 | -0.3 |
317,033 | - | ykgB | b0301 | 0.14 | +0.4 |
317,037 | + | ykgB | b0301 | 0.15 | -0.7 |
317,043 | - | ykgB | b0301 | 0.16 | +0.3 |
317,053 | - | ykgB | b0301 | 0.17 | +0.1 |
317,053 | - | ykgB | b0301 | 0.17 | -0.1 |
317,085 | - | ykgB | b0301 | 0.23 | -0.2 |
317,094 | - | ykgB | b0301 | 0.24 | +0.2 |
317,105 | - | ykgB | b0301 | 0.26 | +1.0 |
317,120 | - | ykgB | b0301 | 0.29 | -0.5 |
317,120 | - | ykgB | b0301 | 0.29 | -1.2 |
317,120 | - | ykgB | b0301 | 0.29 | -0.8 |
317,120 | - | ykgB | b0301 | 0.29 | +0.2 |
317,125 | + | ykgB | b0301 | 0.29 | +1.5 |
317,129 | - | ykgB | b0301 | 0.30 | +0.6 |
317,129 | - | ykgB | b0301 | 0.30 | -0.1 |
317,130 | - | ykgB | b0301 | 0.30 | +0.3 |
317,133 | - | ykgB | b0301 | 0.31 | +0.3 |
317,161 | + | ykgB | b0301 | 0.36 | +0.1 |
317,169 | - | ykgB | b0301 | 0.37 | -0.2 |
317,196 | + | ykgB | b0301 | 0.41 | -0.4 |
317,196 | + | ykgB | b0301 | 0.41 | -0.4 |
317,201 | + | ykgB | b0301 | 0.42 | -0.3 |
317,204 | - | ykgB | b0301 | 0.43 | +0.9 |
317,211 | - | ykgB | b0301 | 0.44 | -0.8 |
317,245 | + | ykgB | b0301 | 0.50 | +0.8 |
317,248 | - | ykgB | b0301 | 0.50 | +0.9 |
317,248 | - | ykgB | b0301 | 0.50 | +0.2 |
317,250 | - | ykgB | b0301 | 0.51 | +0.7 |
317,252 | + | ykgB | b0301 | 0.51 | -0.2 |
317,260 | - | ykgB | b0301 | 0.52 | -0.7 |
317,261 | + | ykgB | b0301 | 0.52 | +0.1 |
317,261 | + | ykgB | b0301 | 0.52 | -2.4 |
317,425 | + | ykgB | b0301 | 0.80 | -0.1 |
317,454 | + | ykgB | b0301 | 0.85 | +0.4 |
317,468 | + | ykgB | b0301 | 0.87 | -0.1 |
317,468 | + | ykgB | b0301 | 0.87 | +0.8 |
317,659 | + | ykgI | b0303 | 0.44 | -0.8 |
317,660 | + | ykgI | b0303 | 0.44 | -0.4 |
317,667 | + | ykgI | b0303 | 0.47 | -1.2 |
317,678 | + | ykgI | b0303 | 0.52 | -0.6 |
317,683 | + | ykgI | b0303 | 0.54 | +0.4 |
317,822 | + | +0.3 | |||
317,939 | - | -0.0 | |||
317,945 | - | +2.0 | |||
317,945 | - | +0.6 | |||
317,976 | + | -0.3 | |||
317,979 | - | +0.3 | |||
317,979 | - | +1.4 | |||
317,983 | - | +0.6 | |||
317,984 | - | -1.6 | |||
317,984 | - | -1.1 | |||
318,003 | - | -1.1 | |||
318,015 | - | -0.1 | |||
318,020 | - | +0.5 | |||
318,025 | - | -1.7 | |||
318,025 | - | -0.4 | |||
318,030 | - | -1.2 | |||
318,037 | - | ykgC | b0304 | 0.10 | +0.9 |
318,037 | - | ykgC | b0304 | 0.10 | +0.7 |
318,039 | - | ykgC | b0304 | 0.10 | +0.1 |
318,039 | - | ykgC | b0304 | 0.10 | -0.6 |
318,039 | - | ykgC | b0304 | 0.10 | -1.1 |
318,039 | - | ykgC | b0304 | 0.10 | -0.5 |
318,039 | - | ykgC | b0304 | 0.10 | -0.2 |
318,039 | - | ykgC | b0304 | 0.10 | +1.0 |
318,039 | - | ykgC | b0304 | 0.10 | +0.7 |
318,039 | - | ykgC | b0304 | 0.10 | -0.4 |
318,039 | - | ykgC | b0304 | 0.10 | -0.2 |
318,039 | - | ykgC | b0304 | 0.10 | -1.0 |
318,039 | - | ykgC | b0304 | 0.10 | -0.0 |
318,039 | - | ykgC | b0304 | 0.10 | -1.5 |
318,039 | - | ykgC | b0304 | 0.10 | +1.2 |
318,039 | - | ykgC | b0304 | 0.10 | +1.3 |
318,042 | - | ykgC | b0304 | 0.11 | +1.1 |
318,044 | - | ykgC | b0304 | 0.11 | +0.7 |
318,044 | - | ykgC | b0304 | 0.11 | +0.9 |
318,046 | - | ykgC | b0304 | 0.11 | -1.0 |
318,046 | - | ykgC | b0304 | 0.11 | -0.9 |
318,049 | - | ykgC | b0304 | 0.11 | +0.1 |
318,049 | - | ykgC | b0304 | 0.11 | -2.3 |
318,049 | - | ykgC | b0304 | 0.11 | -1.3 |
318,049 | - | ykgC | b0304 | 0.11 | -0.7 |
318,049 | - | ykgC | b0304 | 0.11 | -0.5 |
318,049 | - | ykgC | b0304 | 0.11 | +0.1 |
318,049 | - | ykgC | b0304 | 0.11 | +0.7 |
318,049 | - | ykgC | b0304 | 0.11 | +0.2 |
318,049 | - | ykgC | b0304 | 0.11 | -0.4 |
318,049 | - | ykgC | b0304 | 0.11 | +0.5 |
318,049 | - | ykgC | b0304 | 0.11 | +0.9 |
318,051 | - | ykgC | b0304 | 0.11 | +1.0 |
318,051 | - | ykgC | b0304 | 0.11 | +0.4 |
318,051 | - | ykgC | b0304 | 0.11 | +0.4 |
318,054 | - | ykgC | b0304 | 0.12 | -1.5 |
318,054 | - | ykgC | b0304 | 0.12 | -0.6 |
318,060 | - | ykgC | b0304 | 0.12 | -0.1 |
318,060 | - | ykgC | b0304 | 0.12 | +1.1 |
318,070 | - | ykgC | b0304 | 0.13 | +0.0 |
318,098 | - | ykgC | b0304 | 0.15 | +0.9 |
318,105 | - | ykgC | b0304 | 0.15 | +0.6 |
318,105 | - | ykgC | b0304 | 0.15 | +0.4 |
318,105 | - | ykgC | b0304 | 0.15 | +0.9 |
318,108 | - | ykgC | b0304 | 0.16 | +0.8 |
318,111 | - | ykgC | b0304 | 0.16 | +0.9 |
318,113 | - | ykgC | b0304 | 0.16 | +1.1 |
318,116 | - | ykgC | b0304 | 0.16 | +0.1 |
318,116 | - | ykgC | b0304 | 0.16 | +0.5 |
318,123 | - | ykgC | b0304 | 0.17 | +0.0 |
318,138 | - | ykgC | b0304 | 0.18 | -1.2 |
318,138 | - | ykgC | b0304 | 0.18 | +0.1 |
318,142 | - | ykgC | b0304 | 0.18 | +0.3 |
318,146 | - | ykgC | b0304 | 0.19 | -0.3 |
318,158 | - | ykgC | b0304 | 0.19 | +0.2 |
318,165 | - | ykgC | b0304 | 0.20 | -0.3 |
318,165 | - | ykgC | b0304 | 0.20 | -0.7 |
318,183 | - | ykgC | b0304 | 0.21 | -0.1 |
318,187 | + | ykgC | b0304 | 0.22 | +0.2 |
318,190 | - | ykgC | b0304 | 0.22 | -0.1 |
318,193 | + | ykgC | b0304 | 0.22 | -0.2 |
318,195 | + | ykgC | b0304 | 0.22 | +0.6 |
318,195 | + | ykgC | b0304 | 0.22 | -0.7 |
318,195 | + | ykgC | b0304 | 0.22 | +2.1 |
318,195 | + | ykgC | b0304 | 0.22 | -1.1 |
318,201 | - | ykgC | b0304 | 0.23 | +0.6 |
318,201 | - | ykgC | b0304 | 0.23 | +0.3 |
318,201 | - | ykgC | b0304 | 0.23 | +0.5 |
318,204 | + | ykgC | b0304 | 0.23 | -0.1 |
318,205 | + | ykgC | b0304 | 0.23 | +0.1 |
318,209 | + | ykgC | b0304 | 0.23 | +0.2 |
318,212 | - | ykgC | b0304 | 0.24 | +0.7 |
318,212 | - | ykgC | b0304 | 0.24 | -0.4 |
318,212 | - | ykgC | b0304 | 0.24 | +0.4 |
318,212 | - | ykgC | b0304 | 0.24 | +0.6 |
318,217 | - | ykgC | b0304 | 0.24 | -0.1 |
318,217 | - | ykgC | b0304 | 0.24 | +0.4 |
318,217 | - | ykgC | b0304 | 0.24 | -0.9 |
318,217 | - | ykgC | b0304 | 0.24 | +0.3 |
318,220 | - | ykgC | b0304 | 0.24 | -0.6 |
318,266 | - | ykgC | b0304 | 0.28 | +1.0 |
318,269 | - | ykgC | b0304 | 0.28 | +2.2 |
318,274 | - | ykgC | b0304 | 0.28 | -0.7 |
318,279 | + | ykgC | b0304 | 0.29 | -1.2 |
318,279 | + | ykgC | b0304 | 0.29 | -0.7 |
318,287 | - | ykgC | b0304 | 0.29 | -0.1 |
318,287 | - | ykgC | b0304 | 0.29 | +0.4 |
318,287 | - | ykgC | b0304 | 0.29 | -0.3 |
318,287 | - | ykgC | b0304 | 0.29 | +1.0 |
318,287 | - | ykgC | b0304 | 0.29 | +0.0 |
318,287 | - | ykgC | b0304 | 0.29 | -0.4 |
318,287 | - | ykgC | b0304 | 0.29 | -0.9 |
318,287 | - | ykgC | b0304 | 0.29 | +0.1 |
318,287 | - | ykgC | b0304 | 0.29 | +1.4 |
318,287 | - | ykgC | b0304 | 0.29 | +1.4 |
318,287 | - | ykgC | b0304 | 0.29 | -0.4 |
318,287 | - | ykgC | b0304 | 0.29 | -0.3 |
318,287 | - | ykgC | b0304 | 0.29 | +0.6 |
318,289 | - | ykgC | b0304 | 0.29 | -0.2 |
318,289 | - | ykgC | b0304 | 0.29 | +0.3 |
318,290 | + | ykgC | b0304 | 0.29 | +0.1 |
318,295 | - | ykgC | b0304 | 0.30 | -0.1 |
318,298 | - | ykgC | b0304 | 0.30 | +1.0 |
318,298 | - | ykgC | b0304 | 0.30 | +0.7 |
318,298 | - | ykgC | b0304 | 0.30 | +0.2 |
318,301 | + | ykgC | b0304 | 0.30 | -1.5 |
318,310 | + | ykgC | b0304 | 0.31 | -0.4 |
318,313 | + | ykgC | b0304 | 0.31 | -1.4 |
318,313 | - | ykgC | b0304 | 0.31 | -0.4 |
318,356 | - | ykgC | b0304 | 0.34 | +0.2 |
318,368 | + | ykgC | b0304 | 0.35 | +0.7 |
318,388 | - | +2.9 | |||
318,388 | - | ykgC | b0304 | 0.37 | -0.4 |
318,389 | - | ykgC | b0304 | 0.37 | +0.1 |
318,418 | + | ykgC | b0304 | 0.39 | -0.1 |
318,426 | - | ykgC | b0304 | 0.40 | -0.4 |
318,446 | + | ykgC | b0304 | 0.41 | +0.1 |
318,480 | + | ykgC | b0304 | 0.44 | +0.3 |
318,488 | - | ykgC | b0304 | 0.44 | +0.4 |
318,490 | + | ykgC | b0304 | 0.44 | +1.3 |
318,498 | + | ykgC | b0304 | 0.45 | +0.1 |
318,499 | + | ykgC | b0304 | 0.45 | -0.5 |
318,509 | + | ykgC | b0304 | 0.46 | +0.9 |
318,509 | + | ykgC | b0304 | 0.46 | -0.4 |
318,517 | + | ykgC | b0304 | 0.47 | -0.2 |
318,524 | - | ykgC | b0304 | 0.47 | +0.9 |
318,537 | + | ykgC | b0304 | 0.48 | +0.2 |
318,537 | + | ykgC | b0304 | 0.48 | +0.2 |
318,547 | + | ykgC | b0304 | 0.49 | -1.1 |
318,547 | + | ykgC | b0304 | 0.49 | -1.1 |
318,647 | + | ykgC | b0304 | 0.56 | -0.6 |
318,670 | + | ykgC | b0304 | 0.58 | -0.1 |
318,670 | + | ykgC | b0304 | 0.58 | +0.6 |
318,681 | + | ykgC | b0304 | 0.59 | +0.5 |
318,697 | + | ykgC | b0304 | 0.60 | -0.3 |
318,697 | + | ykgC | b0304 | 0.60 | +1.2 |
318,697 | + | ykgC | b0304 | 0.60 | -0.7 |
318,698 | + | ykgC | b0304 | 0.60 | -0.9 |
318,698 | + | ykgC | b0304 | 0.60 | -1.1 |
318,705 | - | ykgC | b0304 | 0.61 | -0.4 |
318,785 | + | ykgC | b0304 | 0.67 | -1.0 |
318,793 | - | ykgC | b0304 | 0.67 | -0.4 |
318,793 | - | ykgC | b0304 | 0.67 | -0.9 |
318,793 | - | ykgC | b0304 | 0.67 | +0.8 |
318,834 | + | ykgC | b0304 | 0.70 | -2.6 |
318,834 | + | ykgC | b0304 | 0.70 | -1.2 |
318,893 | - | ykgC | b0304 | 0.75 | -0.9 |
318,911 | - | ykgC | b0304 | 0.76 | -0.4 |
318,915 | - | ykgC | b0304 | 0.77 | +0.3 |
318,915 | - | ykgC | b0304 | 0.77 | -0.3 |
318,936 | - | ykgC | b0304 | 0.78 | -0.9 |
318,951 | + | ykgC | b0304 | 0.79 | -2.6 |
318,954 | - | ykgC | b0304 | 0.79 | -2.7 |
318,954 | - | ykgC | b0304 | 0.79 | -1.7 |
319,019 | - | ykgC | b0304 | 0.84 | -0.1 |
319,019 | - | ykgC | b0304 | 0.84 | -1.3 |
319,029 | - | ykgC | b0304 | 0.85 | -1.4 |
319,029 | - | ykgC | b0304 | 0.85 | -1.7 |
319,029 | - | ykgC | b0304 | 0.85 | +0.2 |
319,029 | - | ykgC | b0304 | 0.85 | +0.5 |
319,029 | - | ykgC | b0304 | 0.85 | +0.3 |
319,029 | - | ykgC | b0304 | 0.85 | -0.8 |
319,029 | - | ykgC | b0304 | 0.85 | +0.6 |
319,029 | - | ykgC | b0304 | 0.85 | +0.9 |
319,029 | - | ykgC | b0304 | 0.85 | -0.5 |
319,029 | - | ykgC | b0304 | 0.85 | -0.9 |
319,029 | - | ykgC | b0304 | 0.85 | +1.3 |
319,046 | - | ykgC | b0304 | 0.86 | -0.7 |
319,046 | - | ykgC | b0304 | 0.86 | +0.0 |
319,049 | - | ykgC | b0304 | 0.87 | -1.5 |
319,049 | - | ykgC | b0304 | 0.87 | +0.4 |
319,059 | - | ykgC | b0304 | 0.87 | -0.2 |
319,074 | - | ykgC | b0304 | 0.89 | +0.0 |
319,134 | - | -0.2 | |||
319,134 | - | +0.8 | |||
319,138 | - | -0.5 | |||
319,138 | - | +0.4 | |||
319,138 | - | +4.5 | |||
319,139 | - | -1.4 | |||
319,139 | - | +0.5 | |||
319,146 | - | -1.1 | |||
319,146 | - | -1.5 | |||
319,164 | - | +0.2 | |||
319,187 | - | -0.8 | |||
319,187 | - | -1.6 | |||
319,204 | - | -0.5 | |||
319,355 | - | +0.5 | |||
319,387 | - | -0.9 | |||
319,454 | - | -0.1 | |||
319,459 | + | -0.2 | |||
319,466 | - | -1.9 | |||
319,466 | - | +0.6 | |||
319,487 | - | +0.3 | |||
319,487 | - | +1.0 | |||
319,495 | - | +0.7 | |||
319,495 | - | -1.1 | |||
319,534 | - | -0.2 | |||
319,578 | + | ykgD | b0305 | 0.15 | -2.5 |
319,578 | + | ykgD | b0305 | 0.15 | -0.9 |
319,586 | - | ykgD | b0305 | 0.16 | +1.4 |
319,586 | - | ykgD | b0305 | 0.16 | -0.4 |
319,686 | - | ykgD | b0305 | 0.27 | -0.2 |
319,702 | + | ykgD | b0305 | 0.29 | +0.5 |
319,702 | + | ykgD | b0305 | 0.29 | +1.6 |
319,709 | + | ykgD | b0305 | 0.30 | -0.1 |
319,714 | + | ykgD | b0305 | 0.31 | -0.9 |
319,714 | + | ykgD | b0305 | 0.31 | +0.4 |
319,715 | - | ykgD | b0305 | 0.31 | -1.4 |
319,722 | + | ykgD | b0305 | 0.32 | +0.2 |
319,724 | + | ykgD | b0305 | 0.32 | -0.1 |
319,813 | - | ykgD | b0305 | 0.42 | -1.0 |
319,877 | + | ykgD | b0305 | 0.50 | +0.5 |
319,886 | + | ykgD | b0305 | 0.51 | +0.3 |
319,886 | + | ykgD | b0305 | 0.51 | +0.2 |
319,890 | - | ykgD | b0305 | 0.51 | -0.7 |
319,890 | - | ykgD | b0305 | 0.51 | -0.3 |
319,899 | - | ykgD | b0305 | 0.52 | +0.2 |
319,899 | - | ykgD | b0305 | 0.52 | +0.1 |
319,901 | + | ykgD | b0305 | 0.53 | -0.1 |
319,906 | - | ykgD | b0305 | 0.53 | +0.0 |
319,939 | + | ykgD | b0305 | 0.57 | +0.6 |
319,939 | + | ykgD | b0305 | 0.57 | +0.2 |
319,939 | + | ykgD | b0305 | 0.57 | +0.5 |
319,939 | + | ykgD | b0305 | 0.57 | +0.3 |
319,947 | - | ykgD | b0305 | 0.58 | -0.7 |
319,947 | - | ykgD | b0305 | 0.58 | +0.2 |
319,949 | + | ykgD | b0305 | 0.58 | +0.4 |
319,992 | + | ykgD | b0305 | 0.63 | +0.3 |
319,992 | + | ykgD | b0305 | 0.63 | -0.0 |
320,034 | - | ykgD | b0305 | 0.68 | -1.1 |
320,034 | - | ykgD | b0305 | 0.68 | -0.3 |
320,034 | - | ykgD | b0305 | 0.68 | +0.4 |
320,047 | + | ykgD | b0305 | 0.70 | +0.4 |
320,055 | - | ykgD | b0305 | 0.71 | -1.8 |
320,057 | + | ykgD | b0305 | 0.71 | -0.8 |
320,065 | - | ykgD | b0305 | 0.72 | +1.0 |
320,065 | - | ykgD | b0305 | 0.72 | -0.0 |
320,065 | - | ykgD | b0305 | 0.72 | +0.3 |
320,181 | + | ykgD | b0305 | 0.85 | -0.6 |
320,181 | + | ykgD | b0305 | 0.85 | -0.3 |
320,183 | + | ykgD | b0305 | 0.86 | -0.2 |
320,183 | + | ykgD | b0305 | 0.86 | -0.2 |
320,183 | + | ykgD | b0305 | 0.86 | -0.3 |
320,191 | - | ykgD | b0305 | 0.87 | +0.1 |
320,191 | - | ykgD | b0305 | 0.87 | +0.2 |
320,194 | - | ykgD | b0305 | 0.87 | -0.7 |
320,207 | + | ykgD | b0305 | 0.88 | -0.4 |
320,215 | - | ykgD | b0305 | 0.89 | -1.1 |
Or see this region's nucleotide sequence