Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23885 and IAI46_23890 are separated by 404 nucleotides IAI46_23890 and IAI46_23895 are separated by 119 nucleotides IAI46_23895 and IAI46_23900 are separated by 84 nucleotides
IAI46_23885: IAI46_23885 - PTS ascorbate transporter subunit IIC, at 5,080,475 to 5,081,872
_23885
IAI46_23890: IAI46_23890 - L-ascorbate 6-phosphate lactonase, at 5,082,277 to 5,083,341
_23890
IAI46_23895: IAI46_23895 - HTH-type transcriptional regulator UlaR, at 5,083,461 to 5,084,216
_23895
IAI46_23900: IAI46_23900 - thiosulfate sulfurtransferase GlpE, at 5,084,301 to 5,084,627
_23900
Position (kb) 5082
5083
5084 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5081.300 kb on - strand, within IAI46_23885 at 5081.367 kb on + strand, within IAI46_23885 at 5081.368 kb on - strand, within IAI46_23885 at 5081.368 kb on - strand, within IAI46_23885 at 5081.396 kb on + strand, within IAI46_23885 at 5081.428 kb on - strand, within IAI46_23885 at 5081.436 kb on - strand, within IAI46_23885 at 5081.467 kb on + strand, within IAI46_23885 at 5081.467 kb on + strand, within IAI46_23885 at 5081.467 kb on + strand, within IAI46_23885 at 5081.467 kb on + strand, within IAI46_23885 at 5081.467 kb on + strand, within IAI46_23885 at 5081.468 kb on - strand, within IAI46_23885 at 5081.520 kb on + strand, within IAI46_23885 at 5081.520 kb on + strand, within IAI46_23885 at 5081.520 kb on + strand, within IAI46_23885 at 5081.521 kb on - strand, within IAI46_23885 at 5081.521 kb on - strand, within IAI46_23885 at 5081.521 kb on - strand, within IAI46_23885 at 5081.527 kb on + strand, within IAI46_23885 at 5081.572 kb on - strand, within IAI46_23885 at 5081.585 kb on - strand, within IAI46_23885 at 5081.613 kb on + strand, within IAI46_23885 at 5081.613 kb on + strand, within IAI46_23885 at 5081.613 kb on + strand, within IAI46_23885 at 5081.613 kb on + strand, within IAI46_23885 at 5081.614 kb on - strand, within IAI46_23885 at 5081.644 kb on - strand, within IAI46_23885 at 5081.644 kb on - strand, within IAI46_23885 at 5081.716 kb on + strand, within IAI46_23885 at 5081.716 kb on + strand, within IAI46_23885 at 5081.716 kb on + strand, within IAI46_23885 at 5081.717 kb on - strand, within IAI46_23885 at 5081.717 kb on - strand, within IAI46_23885 at 5081.782 kb on - strand at 5081.782 kb on - strand at 5081.859 kb on + strand at 5081.860 kb on - strand at 5081.860 kb on - strand at 5082.033 kb on - strand at 5082.043 kb on + strand at 5082.043 kb on + strand at 5082.104 kb on + strand at 5082.157 kb on + strand at 5082.297 kb on + strand at 5082.489 kb on + strand, within IAI46_23890 at 5082.489 kb on + strand, within IAI46_23890 at 5082.490 kb on - strand, within IAI46_23890 at 5082.490 kb on - strand, within IAI46_23890 at 5082.490 kb on - strand, within IAI46_23890 at 5082.743 kb on + strand, within IAI46_23890 at 5082.744 kb on - strand, within IAI46_23890 at 5082.768 kb on - strand, within IAI46_23890 at 5082.782 kb on + strand, within IAI46_23890 at 5082.783 kb on - strand, within IAI46_23890 at 5082.910 kb on + strand, within IAI46_23890 at 5082.911 kb on - strand, within IAI46_23890 at 5082.940 kb on + strand, within IAI46_23890 at 5082.941 kb on - strand, within IAI46_23890 at 5082.941 kb on - strand, within IAI46_23890 at 5082.941 kb on - strand, within IAI46_23890 at 5082.970 kb on + strand, within IAI46_23890 at 5082.971 kb on - strand, within IAI46_23890 at 5082.974 kb on - strand, within IAI46_23890 at 5082.987 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.127 kb on + strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.128 kb on - strand, within IAI46_23890 at 5083.215 kb on + strand, within IAI46_23890 at 5083.216 kb on - strand, within IAI46_23890 at 5083.216 kb on - strand, within IAI46_23890 at 5083.239 kb on + strand at 5083.261 kb on - strand at 5083.261 kb on - strand at 5083.349 kb on - strand at 5083.368 kb on + strand at 5083.368 kb on + strand at 5083.368 kb on + strand at 5083.368 kb on + strand at 5083.369 kb on - strand at 5083.373 kb on - strand at 5083.373 kb on - strand at 5083.420 kb on + strand at 5083.420 kb on + strand at 5083.420 kb on + strand at 5083.420 kb on + strand at 5083.420 kb on + strand at 5083.421 kb on - strand at 5083.421 kb on - strand at 5083.421 kb on - strand at 5083.481 kb on + strand at 5083.482 kb on - strand at 5083.501 kb on + strand at 5083.508 kb on + strand at 5083.508 kb on + strand at 5083.508 kb on + strand at 5083.509 kb on - strand at 5083.509 kb on - strand at 5083.538 kb on + strand, within IAI46_23895 at 5083.539 kb on - strand, within IAI46_23895 at 5083.552 kb on + strand, within IAI46_23895 at 5083.601 kb on + strand, within IAI46_23895 at 5083.670 kb on + strand, within IAI46_23895 at 5083.750 kb on + strand, within IAI46_23895 at 5083.750 kb on + strand, within IAI46_23895 at 5083.757 kb on + strand, within IAI46_23895 at 5083.757 kb on + strand, within IAI46_23895 at 5083.757 kb on + strand, within IAI46_23895 at 5083.758 kb on - strand, within IAI46_23895 at 5083.758 kb on - strand, within IAI46_23895 at 5083.758 kb on - strand, within IAI46_23895 at 5083.827 kb on + strand, within IAI46_23895 at 5083.827 kb on + strand, within IAI46_23895 at 5083.828 kb on - strand, within IAI46_23895 at 5083.828 kb on - strand, within IAI46_23895 at 5083.845 kb on + strand, within IAI46_23895 at 5083.845 kb on + strand, within IAI46_23895 at 5083.846 kb on - strand, within IAI46_23895 at 5083.846 kb on - strand, within IAI46_23895 at 5083.873 kb on + strand, within IAI46_23895 at 5083.873 kb on + strand, within IAI46_23895 at 5083.873 kb on + strand, within IAI46_23895 at 5083.893 kb on + strand, within IAI46_23895 at 5083.893 kb on + strand, within IAI46_23895 at 5083.894 kb on - strand, within IAI46_23895 at 5083.899 kb on - strand, within IAI46_23895 at 5083.947 kb on + strand, within IAI46_23895 at 5083.947 kb on + strand, within IAI46_23895 at 5084.001 kb on + strand, within IAI46_23895 at 5084.002 kb on - strand, within IAI46_23895 at 5084.049 kb on + strand, within IAI46_23895 at 5084.049 kb on + strand, within IAI46_23895 at 5084.049 kb on + strand, within IAI46_23895 at 5084.050 kb on - strand, within IAI46_23895 at 5084.050 kb on - strand, within IAI46_23895 at 5084.050 kb on - strand, within IAI46_23895 at 5084.173 kb on + strand at 5084.203 kb on + strand at 5084.204 kb on - strand at 5084.214 kb on + strand at 5084.215 kb on - strand at 5084.218 kb on - strand at 5084.218 kb on - strand at 5084.261 kb on - strand at 5084.261 kb on - strand at 5084.261 kb on - strand at 5084.273 kb on + strand at 5084.273 kb on + strand at 5084.274 kb on - strand at 5084.279 kb on + strand at 5084.280 kb on - strand at 5084.282 kb on + strand at 5084.301 kb on - strand at 5084.301 kb on - strand at 5084.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 5,081,300 - IAI46_23885 0.59 +0.6 5,081,367 + IAI46_23885 0.64 +1.3 5,081,368 - IAI46_23885 0.64 +1.0 5,081,368 - IAI46_23885 0.64 +1.1 5,081,396 + IAI46_23885 0.66 -0.3 5,081,428 - IAI46_23885 0.68 +0.2 5,081,436 - IAI46_23885 0.69 +0.5 5,081,467 + IAI46_23885 0.71 -0.0 5,081,467 + IAI46_23885 0.71 +0.0 5,081,467 + IAI46_23885 0.71 -1.2 5,081,467 + IAI46_23885 0.71 +0.0 5,081,467 + IAI46_23885 0.71 -0.3 5,081,468 - IAI46_23885 0.71 +0.5 5,081,520 + IAI46_23885 0.75 -0.5 5,081,520 + IAI46_23885 0.75 +0.3 5,081,520 + IAI46_23885 0.75 -1.1 5,081,521 - IAI46_23885 0.75 -0.7 5,081,521 - IAI46_23885 0.75 -1.1 5,081,521 - IAI46_23885 0.75 +1.4 5,081,527 + IAI46_23885 0.75 +0.4 5,081,572 - IAI46_23885 0.78 -0.6 5,081,585 - IAI46_23885 0.79 +0.3 5,081,613 + IAI46_23885 0.81 +1.2 5,081,613 + IAI46_23885 0.81 +0.2 5,081,613 + IAI46_23885 0.81 +0.1 5,081,613 + IAI46_23885 0.81 +0.4 5,081,614 - IAI46_23885 0.81 -0.7 5,081,644 - IAI46_23885 0.84 +0.5 5,081,644 - IAI46_23885 0.84 +0.4 5,081,716 + IAI46_23885 0.89 +0.2 5,081,716 + IAI46_23885 0.89 +0.8 5,081,716 + IAI46_23885 0.89 -1.7 5,081,717 - IAI46_23885 0.89 +0.6 5,081,717 - IAI46_23885 0.89 -0.1 5,081,782 - +1.3 5,081,782 - +0.5 5,081,859 + +1.5 5,081,860 - -0.0 5,081,860 - +0.2 5,082,033 - +0.1 5,082,043 + -0.5 5,082,043 + +0.2 5,082,104 + +1.0 5,082,157 + -0.9 5,082,297 + +0.5 5,082,489 + IAI46_23890 0.20 +0.2 5,082,489 + IAI46_23890 0.20 +0.6 5,082,490 - IAI46_23890 0.20 -0.2 5,082,490 - IAI46_23890 0.20 +0.2 5,082,490 - IAI46_23890 0.20 -0.0 5,082,743 + IAI46_23890 0.44 +0.5 5,082,744 - IAI46_23890 0.44 +0.5 5,082,768 - IAI46_23890 0.46 +0.7 5,082,782 + IAI46_23890 0.47 +0.4 5,082,783 - IAI46_23890 0.48 +1.8 5,082,910 + IAI46_23890 0.59 -0.1 5,082,911 - IAI46_23890 0.60 +0.0 5,082,940 + IAI46_23890 0.62 +1.0 5,082,941 - IAI46_23890 0.62 +1.5 5,082,941 - IAI46_23890 0.62 +0.5 5,082,941 - IAI46_23890 0.62 +0.2 5,082,970 + IAI46_23890 0.65 -1.0 5,082,971 - IAI46_23890 0.65 +0.4 5,082,974 - IAI46_23890 0.65 -0.6 5,082,987 + IAI46_23890 0.67 +0.8 5,083,127 + IAI46_23890 0.80 -1.0 5,083,127 + IAI46_23890 0.80 +0.4 5,083,127 + IAI46_23890 0.80 -0.8 5,083,127 + IAI46_23890 0.80 -0.4 5,083,127 + IAI46_23890 0.80 +0.2 5,083,127 + IAI46_23890 0.80 -0.1 5,083,127 + IAI46_23890 0.80 +0.8 5,083,127 + IAI46_23890 0.80 -0.1 5,083,128 - IAI46_23890 0.80 -1.9 5,083,128 - IAI46_23890 0.80 +1.2 5,083,128 - IAI46_23890 0.80 +0.0 5,083,128 - IAI46_23890 0.80 +0.3 5,083,128 - IAI46_23890 0.80 -1.5 5,083,128 - IAI46_23890 0.80 +1.9 5,083,128 - IAI46_23890 0.80 +0.0 5,083,128 - IAI46_23890 0.80 +0.4 5,083,128 - IAI46_23890 0.80 +0.3 5,083,128 - IAI46_23890 0.80 -0.2 5,083,128 - IAI46_23890 0.80 +0.5 5,083,128 - IAI46_23890 0.80 -0.5 5,083,128 - IAI46_23890 0.80 -0.4 5,083,128 - IAI46_23890 0.80 +0.1 5,083,128 - IAI46_23890 0.80 +0.7 5,083,215 + IAI46_23890 0.88 +0.1 5,083,216 - IAI46_23890 0.88 -0.3 5,083,216 - IAI46_23890 0.88 +0.2 5,083,239 + +2.2 5,083,261 - +0.6 5,083,261 - +0.4 5,083,349 - +0.4 5,083,368 + +0.4 5,083,368 + +1.5 5,083,368 + +0.0 5,083,368 + +1.1 5,083,369 - +1.0 5,083,373 - +0.7 5,083,373 - +0.7 5,083,420 + +0.7 5,083,420 + +0.1 5,083,420 + -0.2 5,083,420 + -2.1 5,083,420 + -0.1 5,083,421 - +0.6 5,083,421 - -0.3 5,083,421 - -0.3 5,083,481 + +1.5 5,083,482 - +0.4 5,083,501 + -0.0 5,083,508 + -0.4 5,083,508 + -0.0 5,083,508 + +1.2 5,083,509 - +0.3 5,083,509 - +1.9 5,083,538 + IAI46_23895 0.10 +0.0 5,083,539 - IAI46_23895 0.10 +0.5 5,083,552 + IAI46_23895 0.12 -0.1 5,083,601 + IAI46_23895 0.19 +0.8 5,083,670 + IAI46_23895 0.28 -0.3 5,083,750 + IAI46_23895 0.38 +0.7 5,083,750 + IAI46_23895 0.38 +0.6 5,083,757 + IAI46_23895 0.39 -0.3 5,083,757 + IAI46_23895 0.39 -0.0 5,083,757 + IAI46_23895 0.39 +0.6 5,083,758 - IAI46_23895 0.39 -0.0 5,083,758 - IAI46_23895 0.39 -0.2 5,083,758 - IAI46_23895 0.39 +0.4 5,083,827 + IAI46_23895 0.48 +0.5 5,083,827 + IAI46_23895 0.48 -0.1 5,083,828 - IAI46_23895 0.49 -1.2 5,083,828 - IAI46_23895 0.49 -0.0 5,083,845 + IAI46_23895 0.51 -0.1 5,083,845 + IAI46_23895 0.51 +0.7 5,083,846 - IAI46_23895 0.51 +0.2 5,083,846 - IAI46_23895 0.51 +0.5 5,083,873 + IAI46_23895 0.54 -0.0 5,083,873 + IAI46_23895 0.54 +1.4 5,083,873 + IAI46_23895 0.54 +0.1 5,083,893 + IAI46_23895 0.57 -1.2 5,083,893 + IAI46_23895 0.57 -1.0 5,083,894 - IAI46_23895 0.57 +0.3 5,083,899 - IAI46_23895 0.58 +0.2 5,083,947 + IAI46_23895 0.64 +0.2 5,083,947 + IAI46_23895 0.64 -0.1 5,084,001 + IAI46_23895 0.71 +0.8 5,084,002 - IAI46_23895 0.72 -0.7 5,084,049 + IAI46_23895 0.78 +0.3 5,084,049 + IAI46_23895 0.78 +0.2 5,084,049 + IAI46_23895 0.78 +1.5 5,084,050 - IAI46_23895 0.78 +0.5 5,084,050 - IAI46_23895 0.78 +1.1 5,084,050 - IAI46_23895 0.78 +0.3 5,084,173 + +0.2 5,084,203 + +0.2 5,084,204 - +0.1 5,084,214 + +0.0 5,084,215 - +0.4 5,084,218 - -0.2 5,084,218 - -0.5 5,084,261 - -0.2 5,084,261 - +0.6 5,084,261 - +0.4 5,084,273 + -0.0 5,084,273 + -0.4 5,084,274 - +0.7 5,084,279 + +0.5 5,084,280 - +0.4 5,084,282 + +0.1 5,084,301 - +0.5 5,084,301 - -0.3 5,084,301 - +0.3
Or see this region's nucleotide sequence