Strain Fitness in Serratia liquefaciens MT49 around IAI46_21035

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
4,451,510	+				-0.6
4,451,510	+				+0.5
4,451,553	-		IAI46_21030	0.11	+0.8
4,451,573	+		IAI46_21030	0.13	-1.1
4,451,573	+		IAI46_21030	0.13	+0.1
4,451,573	+		IAI46_21030	0.13	-0.3
4,451,573	+		IAI46_21030	0.13	-0.1
4,451,573	+		IAI46_21030	0.13	+0.9
4,451,573	+		IAI46_21030	0.13	+0.3
4,451,574	-		IAI46_21030	0.13	+1.7
4,451,574	-		IAI46_21030	0.13	+0.4
4,451,574	-		IAI46_21030	0.13	+0.9
4,451,574	-		IAI46_21030	0.13	-0.6
4,451,772	+		IAI46_21030	0.32	+0.1
4,451,772	+		IAI46_21030	0.32	+0.5
4,451,819	+		IAI46_21030	0.36	-0.4
4,451,819	+		IAI46_21030	0.36	+0.4
4,451,820	-		IAI46_21030	0.36	+2.1
4,451,820	-		IAI46_21030	0.36	-2.6
4,451,820	-		IAI46_21030	0.36	+0.4
4,452,002	-		IAI46_21030	0.53	+0.6
4,452,035	+		IAI46_21030	0.56	+0.2
4,452,035	+		IAI46_21030	0.56	-0.5
4,452,035	+		IAI46_21030	0.56	+1.2
4,452,036	-		IAI46_21030	0.56	+0.1
4,452,179	-		IAI46_21030	0.70	+0.7
4,452,233	+		IAI46_21030	0.75	-0.1
4,452,233	+		IAI46_21030	0.75	+0.4
4,452,234	-		IAI46_21030	0.75	+0.9
4,452,234	-		IAI46_21030	0.75	+0.4
4,452,234	-		IAI46_21030	0.75	+0.5
4,452,244	+		IAI46_21030	0.76	+0.9
4,452,245	-		IAI46_21030	0.76	+0.2
4,452,299	+		IAI46_21030	0.81	+0.5
4,452,299	+		IAI46_21030	0.81	+1.0
4,452,299	+		IAI46_21030	0.81	+1.1
4,452,299	+		IAI46_21030	0.81	+0.0
4,452,299	+		IAI46_21030	0.81	+0.3
4,452,300	-		IAI46_21030	0.81	+1.0
4,452,306	+		IAI46_21030	0.82	-0.2
4,452,307	-		IAI46_21030	0.82	-0.4
4,452,307	-		IAI46_21030	0.82	+0.0
4,452,321	+		IAI46_21030	0.83	+1.4
4,452,322	-		IAI46_21030	0.83	+0.6
4,452,424	+				+0.4
4,452,424	+				-0.2
4,452,504	-				-1.6
4,452,504	-				-0.3
4,452,560	-				-0.6
4,452,560	-				-0.1
4,452,560	-				+0.8
4,452,560	-				+0.3
4,452,626	+				-0.5
4,452,654	+				+0.7
4,452,669	+				+0.5
4,452,669	+				-0.1
4,452,670	-				-0.6
4,452,736	+		IAI46_21035	0.14	-0.1
4,452,813	-		IAI46_21035	0.18	-0.2
4,452,864	+		IAI46_21035	0.21	+0.4
4,452,864	+		IAI46_21035	0.21	-0.2
4,452,865	-		IAI46_21035	0.21	+0.7
4,453,068	+		IAI46_21035	0.32	-1.2
4,453,128	+		IAI46_21035	0.36	+0.4
4,453,129	-		IAI46_21035	0.36	+0.6
4,453,136	+		IAI46_21035	0.36	-0.3
4,453,225	+		IAI46_21035	0.41	-0.0
4,453,225	+		IAI46_21035	0.41	+0.4
4,453,250	-		IAI46_21035	0.43	+0.7
4,453,273	-		IAI46_21035	0.44	+0.3
4,453,276	+		IAI46_21035	0.44	+0.1
4,453,277	-		IAI46_21035	0.44	-0.2
4,453,313	+		IAI46_21035	0.46	+0.1
4,453,313	+		IAI46_21035	0.46	+0.0
4,453,313	+		IAI46_21035	0.46	+0.1
4,453,313	+		IAI46_21035	0.46	+0.0
4,453,314	-		IAI46_21035	0.46	+0.4
4,453,314	-		IAI46_21035	0.46	-0.2
4,453,509	+		IAI46_21035	0.57	+3.1
4,453,510	-		IAI46_21035	0.57	+0.4
4,453,510	-		IAI46_21035	0.57	-0.4
4,453,542	+		IAI46_21035	0.59	-0.2
4,453,548	+		IAI46_21035	0.60	-0.2
4,453,549	-		IAI46_21035	0.60	-0.2
4,453,549	-		IAI46_21035	0.60	+0.7
4,453,549	-		IAI46_21035	0.60	-0.0
4,453,549	-		IAI46_21035	0.60	+0.2
4,453,632	-		IAI46_21035	0.64	+0.8
4,453,658	+		IAI46_21035	0.66	+2.1
4,453,711	+		IAI46_21035	0.69	+0.9
4,453,763	-		IAI46_21035	0.72	-0.3
4,453,765	-		IAI46_21035	0.72	+0.2
4,453,770	+		IAI46_21035	0.72	+0.1
4,453,770	+		IAI46_21035	0.72	+0.1
4,453,824	+		IAI46_21035	0.75	+0.3
4,453,825	-		IAI46_21035	0.75	+1.0
4,453,829	-		IAI46_21035	0.75	-0.2
4,453,902	+		IAI46_21035	0.80	+0.1
4,453,902	+		IAI46_21035	0.80	+0.3
4,453,960	+		IAI46_21035	0.83	+0.5
4,453,961	-		IAI46_21035	0.83	-0.3
4,454,008	+		IAI46_21035	0.86	-0.2
4,454,008	+		IAI46_21035	0.86	-0.8
4,454,009	-		IAI46_21035	0.86	+0.4
4,454,036	+		IAI46_21035	0.87	+1.2
4,454,076	+		IAI46_21035	0.89	+2.1
4,454,076	+		IAI46_21035	0.89	-0.2
4,454,120	-				+0.5
4,454,173	+				-0.1
4,454,173	+				-0.0
4,454,174	-				+0.2
4,454,174	-				+0.1
4,454,190	+				+0.0
4,454,191	-				+0.2
4,454,191	-				-0.3
4,454,194	+				+0.2
4,454,194	+				-0.1
4,454,194	+				-0.1
4,454,257	+				-0.2
4,454,257	+				-0.3
4,454,257	+				-1.7
4,454,257	+				+0.6
4,454,258	-				+0.7
4,454,258	-				+0.2
4,454,263	+				-0.1
4,454,263	+				+1.1
4,454,264	-				+0.6
4,454,264	-				+0.2
4,454,264	-				-1.9
4,454,264	-				-0.1
4,454,264	-				+1.1
4,454,269	-				+0.3
4,454,282	+				+0.2
4,454,282	+				+0.8
4,454,283	-				+0.8
4,454,363	+				+1.4
4,454,380	+				-0.6
4,454,380	+				+1.5
4,454,407	+				+1.1
4,454,407	+				+0.1
4,454,435	+				+0.0
4,454,435	+				+0.1
4,454,498	-		IAI46_21040	0.14	+0.0
4,454,563	+		IAI46_21040	0.20	+0.5
4,454,563	+		IAI46_21040	0.20	+0.3
4,454,564	-		IAI46_21040	0.20	-0.1
4,454,564	-		IAI46_21040	0.20	+0.6
4,454,564	-		IAI46_21040	0.20	+1.8
4,454,564	-		IAI46_21040	0.20	-0.6
4,454,568	-		IAI46_21040	0.20	-0.8
4,454,641	+		IAI46_21040	0.27	-0.5
4,454,641	+		IAI46_21040	0.27	+0.9
4,454,642	-		IAI46_21040	0.27	-0.3
4,454,642	-		IAI46_21040	0.27	-0.6
4,454,698	+		IAI46_21040	0.32	-1.0
4,454,760	-		IAI46_21040	0.38	-0.3
4,454,811	-		IAI46_21040	0.43	-1.1
4,454,884	+		IAI46_21040	0.49	-0.2
4,454,885	-		IAI46_21040	0.49	+0.5
4,454,903	+		IAI46_21040	0.51	-0.1
4,454,988	-		IAI46_21040	0.59	+0.4
4,454,990	-		IAI46_21040	0.59	+0.9
4,455,010	+		IAI46_21040	0.61	+1.0
4,455,010	+		IAI46_21040	0.61	+0.0
4,455,011	-		IAI46_21040	0.61	+0.1
4,455,011	-		IAI46_21040	0.61	-0.9
4,455,011	-		IAI46_21040	0.61	+1.2
4,455,011	-		IAI46_21040	0.61	+0.7
4,455,011	-		IAI46_21040	0.61	+0.3
4,455,079	+		IAI46_21040	0.67	-1.2
4,455,080	-		IAI46_21040	0.67	+0.1
4,455,091	+		IAI46_21040	0.68	+0.6
4,455,092	-		IAI46_21040	0.69	+0.3
4,455,177	-		IAI46_21040	0.76	+0.5
4,455,177	-		IAI46_21040	0.76	-1.8
4,455,177	-		IAI46_21040	0.76	+0.9
4,455,179	-		IAI46_21040	0.76	-0.5
4,455,187	+		IAI46_21040	0.77	+1.0
4,455,187	+		IAI46_21040	0.77	-0.5
4,455,188	-		IAI46_21040	0.77	+0.7
4,455,188	-		IAI46_21040	0.77	-0.1
4,455,214	+		IAI46_21040	0.80	-0.1
4,455,224	+		IAI46_21040	0.81	-0.7