Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14305 and IAI46_14310 overlap by 1 nucleotides IAI46_14310 and IAI46_14315 overlap by 1 nucleotides
IAI46_14305: IAI46_14305 - DNA topoisomerase III, at 3,033,934 to 3,035,859
_14305
IAI46_14310: IAI46_14310 - tRNA 2-selenouridine(34) synthase MnmH, at 3,035,859 to 3,036,977
_14310
IAI46_14315: IAI46_14315 - selenide, water dikinase SelD, at 3,036,977 to 3,038,020
_14315
Position (kb)
3035
3036
3037 Strain fitness (log2 ratio)
-2
-1
0
1 at 3035.025 kb on - strand, within IAI46_14305 at 3035.025 kb on - strand, within IAI46_14305 at 3035.114 kb on + strand, within IAI46_14305 at 3035.321 kb on + strand, within IAI46_14305 at 3035.321 kb on + strand, within IAI46_14305 at 3035.321 kb on + strand, within IAI46_14305 at 3035.406 kb on + strand, within IAI46_14305 at 3035.423 kb on - strand, within IAI46_14305 at 3035.700 kb on - strand at 3035.726 kb on - strand at 3035.861 kb on - strand at 3035.881 kb on + strand at 3035.881 kb on + strand at 3035.881 kb on + strand at 3035.881 kb on + strand at 3035.962 kb on + strand at 3035.962 kb on + strand at 3035.962 kb on + strand at 3035.977 kb on + strand, within IAI46_14310 at 3035.978 kb on - strand, within IAI46_14310 at 3036.035 kb on - strand, within IAI46_14310 at 3036.046 kb on - strand, within IAI46_14310 at 3036.130 kb on + strand, within IAI46_14310 at 3036.200 kb on + strand, within IAI46_14310 at 3036.201 kb on - strand, within IAI46_14310 at 3036.201 kb on - strand, within IAI46_14310 at 3036.202 kb on + strand, within IAI46_14310 at 3036.203 kb on - strand, within IAI46_14310 at 3036.373 kb on - strand, within IAI46_14310 at 3036.606 kb on - strand, within IAI46_14310 at 3036.689 kb on - strand, within IAI46_14310 at 3036.689 kb on - strand, within IAI46_14310 at 3036.955 kb on - strand at 3037.016 kb on - strand at 3037.016 kb on - strand at 3037.037 kb on + strand at 3037.038 kb on - strand at 3037.179 kb on + strand, within IAI46_14315 at 3037.444 kb on + strand, within IAI46_14315 at 3037.595 kb on + strand, within IAI46_14315 at 3037.597 kb on + strand, within IAI46_14315 at 3037.598 kb on - strand, within IAI46_14315 at 3037.598 kb on - strand, within IAI46_14315 at 3037.744 kb on - strand, within IAI46_14315 at 3037.811 kb on - strand, within IAI46_14315 at 3037.857 kb on + strand, within IAI46_14315 at 3037.857 kb on + strand, within IAI46_14315 at 3037.937 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 3,035,025 - IAI46_14305 0.57 +0.7 3,035,025 - IAI46_14305 0.57 -0.6 3,035,114 + IAI46_14305 0.61 -2.3 3,035,321 + IAI46_14305 0.72 -1.9 3,035,321 + IAI46_14305 0.72 +0.2 3,035,321 + IAI46_14305 0.72 -0.4 3,035,406 + IAI46_14305 0.76 -0.3 3,035,423 - IAI46_14305 0.77 +0.4 3,035,700 - +0.2 3,035,726 - -0.1 3,035,861 - -0.0 3,035,881 + -0.3 3,035,881 + +0.4 3,035,881 + -0.1 3,035,881 + -0.6 3,035,962 + +1.4 3,035,962 + +0.4 3,035,962 + -0.7 3,035,977 + IAI46_14310 0.11 -0.3 3,035,978 - IAI46_14310 0.11 -0.6 3,036,035 - IAI46_14310 0.16 +1.2 3,036,046 - IAI46_14310 0.17 +0.0 3,036,130 + IAI46_14310 0.24 -0.1 3,036,200 + IAI46_14310 0.30 -0.9 3,036,201 - IAI46_14310 0.31 +1.3 3,036,201 - IAI46_14310 0.31 -0.5 3,036,202 + IAI46_14310 0.31 +0.0 3,036,203 - IAI46_14310 0.31 +0.3 3,036,373 - IAI46_14310 0.46 -1.5 3,036,606 - IAI46_14310 0.67 +0.6 3,036,689 - IAI46_14310 0.74 -0.7 3,036,689 - IAI46_14310 0.74 -0.1 3,036,955 - -0.1 3,037,016 - -0.1 3,037,016 - +0.0 3,037,037 + -0.0 3,037,038 - -0.1 3,037,179 + IAI46_14315 0.19 +1.1 3,037,444 + IAI46_14315 0.45 +0.2 3,037,595 + IAI46_14315 0.59 +1.0 3,037,597 + IAI46_14315 0.59 +0.0 3,037,598 - IAI46_14315 0.59 -0.6 3,037,598 - IAI46_14315 0.59 +0.1 3,037,744 - IAI46_14315 0.73 +1.1 3,037,811 - IAI46_14315 0.80 -0.7 3,037,857 + IAI46_14315 0.84 +1.4 3,037,857 + IAI46_14315 0.84 +0.9 3,037,937 - +0.2
Or see this region's nucleotide sequence