Strain Fitness in Serratia liquefaciens MT49 around IAI46_05605

Experiment: Nickel (II) chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, aerobic
1,208,124	+		IAI46_05600	0.68	-0.1
1,208,124	+		IAI46_05600	0.68	-1.1
1,208,125	-		IAI46_05600	0.68	+1.2
1,208,154	+		IAI46_05600	0.69	+0.7
1,208,155	-		IAI46_05600	0.69	+0.0
1,208,155	-		IAI46_05600	0.69	-0.0
1,208,213	+		IAI46_05600	0.71	+0.6
1,208,214	-		IAI46_05600	0.71	+1.0
1,208,214	-		IAI46_05600	0.71	+0.2
1,208,214	-		IAI46_05600	0.71	+1.0
1,208,214	-		IAI46_05600	0.71	+0.5
1,208,218	+		IAI46_05600	0.71	-0.1
1,208,244	+		IAI46_05600	0.72	+0.3
1,208,245	-		IAI46_05600	0.72	+1.3
1,208,250	+		IAI46_05600	0.73	+0.4
1,208,250	+		IAI46_05600	0.73	-0.6
1,208,250	+		IAI46_05600	0.73	-0.2
1,208,251	-		IAI46_05600	0.73	-1.0
1,208,251	-		IAI46_05600	0.73	+0.0
1,208,251	-		IAI46_05600	0.73	+1.7
1,208,260	+		IAI46_05600	0.73	-0.9
1,208,288	+		IAI46_05600	0.74	-0.7
1,208,308	+		IAI46_05600	0.75	+0.6
1,208,309	-		IAI46_05600	0.75	+0.3
1,208,312	+		IAI46_05600	0.75	+0.7
1,208,312	+		IAI46_05600	0.75	+0.8
1,208,313	-		IAI46_05600	0.75	+0.0
1,208,313	-		IAI46_05600	0.75	-0.4
1,208,313	-		IAI46_05600	0.75	+0.2
1,208,362	+		IAI46_05600	0.77	+1.2
1,208,362	+		IAI46_05600	0.77	+0.4
1,208,363	-		IAI46_05600	0.77	+0.4
1,208,363	-		IAI46_05600	0.77	-0.7
1,208,364	+		IAI46_05600	0.77	-0.1
1,208,364	+		IAI46_05600	0.77	+0.8
1,208,365	-		IAI46_05600	0.77	+1.4
1,208,365	-		IAI46_05600	0.77	-0.1
1,208,365	-		IAI46_05600	0.77	+0.1
1,208,430	-		IAI46_05600	0.80	+0.3
1,208,468	+		IAI46_05600	0.81	-0.2
1,208,508	+		IAI46_05600	0.83	+1.4
1,208,523	+		IAI46_05600	0.83	-0.2
1,208,523	+		IAI46_05600	0.83	+0.1
1,208,523	+		IAI46_05600	0.83	-0.7
1,208,525	+		IAI46_05600	0.83	+0.5
1,208,525	+		IAI46_05600	0.83	+0.2
1,208,525	+		IAI46_05600	0.83	+0.3
1,208,526	-		IAI46_05600	0.83	+0.0
1,208,538	+		IAI46_05600	0.84	+0.0
1,208,539	-		IAI46_05600	0.84	-0.2
1,208,646	-		IAI46_05600	0.88	-0.5
1,208,728	+				-0.2
1,208,746	+				+0.6
1,208,746	+				+0.6
1,208,747	-				-0.1
1,208,747	-				+1.8
1,208,747	-				-0.0
1,208,755	-				+0.4
1,208,755	-				-0.1
1,208,755	-				+0.2
1,208,838	-				+0.9
1,208,846	+				-0.6
1,208,945	-				-0.6
1,208,990	-				-1.1
1,209,040	-				+0.6
1,209,050	+				-1.6
1,209,050	+				+0.1
1,209,051	-				-0.4
1,209,051	-				-0.1
1,209,156	+		IAI46_05605	0.17	+0.7
1,209,156	+		IAI46_05605	0.17	+0.7
1,209,157	-		IAI46_05605	0.18	+0.2
1,209,170	-		IAI46_05605	0.23	+0.2
1,209,206	-		IAI46_05605	0.36	+0.1
1,209,219	+		IAI46_05605	0.41	+0.6
1,209,236	+		IAI46_05605	0.47	+0.9
1,209,274	+		IAI46_05605	0.61	+0.4
1,209,303	+		IAI46_05605	0.72	+0.3
1,209,357	+				-0.4
1,209,357	+				+0.2
1,209,363	+				+0.0
1,209,364	-				+1.6
1,209,364	-				+0.0
1,209,479	-				-0.0
1,209,503	-				-0.1
1,209,521	-				+0.0
1,209,542	-				+0.4
1,209,585	+				-3.6
1,209,586	-				+0.5
1,209,602	+				-0.2
1,209,603	-				+0.5
1,209,607	-				+0.8
1,209,607	-				+0.4
1,209,608	+				-0.2
1,209,640	+		IAI46_05610	0.12	+1.5
1,209,640	+		IAI46_05610	0.12	+0.0
1,209,640	+		IAI46_05610	0.12	-0.3
1,209,641	-		IAI46_05610	0.12	+0.4
1,209,641	-		IAI46_05610	0.12	+1.3
1,209,661	+		IAI46_05610	0.13	+0.2
1,209,662	-		IAI46_05610	0.13	+0.3
1,209,662	-		IAI46_05610	0.13	+0.4
1,209,668	+		IAI46_05610	0.14	+0.3
1,209,703	+		IAI46_05610	0.16	+0.2
1,209,703	+		IAI46_05610	0.16	+0.6
1,209,704	-		IAI46_05610	0.16	+0.2
1,209,704	-		IAI46_05610	0.16	-0.1
1,209,755	+		IAI46_05610	0.19	-0.6
1,209,766	+		IAI46_05610	0.20	+1.0
1,209,766	+		IAI46_05610	0.20	+1.2
1,209,767	-		IAI46_05610	0.20	-0.6
1,209,769	+		IAI46_05610	0.20	-0.4
1,209,778	+		IAI46_05610	0.21	+0.6
1,209,780	+		IAI46_05610	0.21	+0.1
1,209,780	+		IAI46_05610	0.21	+2.0
1,209,780	+		IAI46_05610	0.21	+0.9
1,209,780	+		IAI46_05610	0.21	+0.2
1,209,780	+		IAI46_05610	0.21	-0.1
1,209,781	-		IAI46_05610	0.21	+0.0
1,209,782	+		IAI46_05610	0.21	+0.9
1,209,782	+		IAI46_05610	0.21	-0.6
1,209,782	+		IAI46_05610	0.21	+0.7
1,209,782	+		IAI46_05610	0.21	+0.3
1,209,782	+		IAI46_05610	0.21	+0.5
1,209,782	+		IAI46_05610	0.21	+0.4
1,209,782	+		IAI46_05610	0.21	-0.8
1,209,782	+		IAI46_05610	0.21	+0.7
1,209,783	-		IAI46_05610	0.21	+0.4
1,209,783	-		IAI46_05610	0.21	-0.8
1,209,783	-		IAI46_05610	0.21	+0.1
1,209,783	-		IAI46_05610	0.21	-0.3
1,209,797	+		IAI46_05610	0.22	+0.0
1,209,798	-		IAI46_05610	0.22	+0.3
1,209,802	+		IAI46_05610	0.23	+0.5
1,209,803	-		IAI46_05610	0.23	-0.5
1,209,803	-		IAI46_05610	0.23	-0.9
1,209,807	-		IAI46_05610	0.23	+1.3
1,209,807	-		IAI46_05610	0.23	+0.8
1,209,885	+		IAI46_05610	0.28	+0.4
1,209,894	+		IAI46_05610	0.29	-0.2
1,209,917	+		IAI46_05610	0.30	+0.7
1,209,944	+		IAI46_05610	0.32	+1.2
1,209,945	-		IAI46_05610	0.32	+0.3
1,210,013	-		IAI46_05610	0.37	-1.2
1,210,013	-		IAI46_05610	0.37	-0.2
1,210,013	-		IAI46_05610	0.37	+0.3
1,210,013	-		IAI46_05610	0.37	-0.1
1,210,013	-		IAI46_05610	0.37	+0.8
1,210,013	-		IAI46_05610	0.37	+0.1
1,210,013	-		IAI46_05610	0.37	+0.6
1,210,013	-		IAI46_05610	0.37	-1.0
1,210,013	-		IAI46_05610	0.37	-0.3
1,210,014	+		IAI46_05610	0.37	-0.7
1,210,037	-		IAI46_05610	0.38	-0.4
1,210,065	-		IAI46_05610	0.40	-1.0
1,210,140	-		IAI46_05610	0.45	+0.2
1,210,185	+		IAI46_05610	0.48	-1.0
1,210,185	+		IAI46_05610	0.48	+0.1
1,210,185	+		IAI46_05610	0.48	+0.3
1,210,186	-		IAI46_05610	0.49	-0.0
1,210,186	-		IAI46_05610	0.49	+1.3
1,210,243	+		IAI46_05610	0.52	+0.0
1,210,260	-		IAI46_05610	0.54	-1.4
1,210,323	-		IAI46_05610	0.58	-1.3