Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03720 and IAI46_03725 are separated by 1 nucleotides IAI46_03725 and IAI46_03730 are separated by 85 nucleotides IAI46_03730 and IAI46_03735 are separated by 52 nucleotides
IAI46_03720: IAI46_03720 - sulfate adenylyltransferase subunit CysN, at 811,657 to 813,084
_03720
IAI46_03725: IAI46_03725 - adenylyl-sulfate kinase, at 813,086 to 813,715
_03725
IAI46_03730: IAI46_03730 - DUF3561 family protein, at 813,801 to 814,118
_03730
IAI46_03735: IAI46_03735 - amino acid ABC transporter ATP-binding protein, at 814,171 to 814,893
_03735
Position (kb) 813
814 Strain fitness (log2 ratio) -2
-1
0
1 at 812.160 kb on + strand, within IAI46_03720 at 812.175 kb on - strand, within IAI46_03720 at 812.175 kb on - strand, within IAI46_03720 at 812.175 kb on - strand, within IAI46_03720 at 812.179 kb on + strand, within IAI46_03720 at 812.180 kb on - strand, within IAI46_03720 at 812.215 kb on + strand, within IAI46_03720 at 812.215 kb on + strand, within IAI46_03720 at 812.216 kb on - strand, within IAI46_03720 at 812.216 kb on - strand, within IAI46_03720 at 812.410 kb on + strand, within IAI46_03720 at 812.411 kb on - strand, within IAI46_03720 at 812.411 kb on - strand, within IAI46_03720 at 812.411 kb on - strand, within IAI46_03720 at 812.444 kb on - strand, within IAI46_03720 at 812.468 kb on + strand, within IAI46_03720 at 812.469 kb on - strand, within IAI46_03720 at 812.477 kb on + strand, within IAI46_03720 at 812.495 kb on + strand, within IAI46_03720 at 812.518 kb on - strand, within IAI46_03720 at 812.522 kb on + strand, within IAI46_03720 at 812.530 kb on - strand, within IAI46_03720 at 812.608 kb on - strand, within IAI46_03720 at 812.611 kb on - strand, within IAI46_03720 at 812.719 kb on + strand, within IAI46_03720 at 812.720 kb on - strand, within IAI46_03720 at 812.768 kb on + strand, within IAI46_03720 at 812.769 kb on - strand, within IAI46_03720 at 812.819 kb on + strand, within IAI46_03720 at 812.881 kb on + strand, within IAI46_03720 at 812.881 kb on + strand, within IAI46_03720 at 812.881 kb on + strand, within IAI46_03720 at 812.882 kb on - strand, within IAI46_03720 at 812.882 kb on - strand, within IAI46_03720 at 813.201 kb on + strand, within IAI46_03725 at 813.201 kb on + strand, within IAI46_03725 at 813.202 kb on - strand, within IAI46_03725 at 813.287 kb on + strand, within IAI46_03725 at 813.288 kb on - strand, within IAI46_03725 at 813.365 kb on - strand, within IAI46_03725 at 813.551 kb on + strand, within IAI46_03725 at 813.552 kb on - strand, within IAI46_03725 at 813.581 kb on - strand, within IAI46_03725 at 813.701 kb on - strand at 813.703 kb on + strand at 813.703 kb on + strand at 813.704 kb on - strand at 813.704 kb on - strand at 813.704 kb on - strand at 813.748 kb on - strand at 813.756 kb on + strand at 813.800 kb on + strand at 813.801 kb on - strand at 813.818 kb on + strand at 813.819 kb on - strand at 813.819 kb on - strand at 813.859 kb on - strand, within IAI46_03730 at 813.957 kb on + strand, within IAI46_03730 at 813.957 kb on + strand, within IAI46_03730 at 813.958 kb on - strand, within IAI46_03730 at 813.958 kb on - strand, within IAI46_03730 at 814.047 kb on - strand, within IAI46_03730 at 814.268 kb on + strand, within IAI46_03735 at 814.552 kb on + strand, within IAI46_03735 at 814.553 kb on - strand, within IAI46_03735 at 814.636 kb on - strand, within IAI46_03735
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 812,160 + IAI46_03720 0.35 +0.3 812,175 - IAI46_03720 0.36 -0.2 812,175 - IAI46_03720 0.36 -0.6 812,175 - IAI46_03720 0.36 +0.2 812,179 + IAI46_03720 0.37 +1.1 812,180 - IAI46_03720 0.37 -0.1 812,215 + IAI46_03720 0.39 +0.3 812,215 + IAI46_03720 0.39 -0.1 812,216 - IAI46_03720 0.39 +0.3 812,216 - IAI46_03720 0.39 -0.6 812,410 + IAI46_03720 0.53 +0.8 812,411 - IAI46_03720 0.53 -0.9 812,411 - IAI46_03720 0.53 +0.6 812,411 - IAI46_03720 0.53 -0.0 812,444 - IAI46_03720 0.55 -1.9 812,468 + IAI46_03720 0.57 -1.4 812,469 - IAI46_03720 0.57 -1.1 812,477 + IAI46_03720 0.57 +1.0 812,495 + IAI46_03720 0.59 +0.4 812,518 - IAI46_03720 0.60 -0.0 812,522 + IAI46_03720 0.61 -0.2 812,530 - IAI46_03720 0.61 -0.0 812,608 - IAI46_03720 0.67 -1.2 812,611 - IAI46_03720 0.67 +1.0 812,719 + IAI46_03720 0.74 +0.5 812,720 - IAI46_03720 0.74 -1.2 812,768 + IAI46_03720 0.78 +0.8 812,769 - IAI46_03720 0.78 -0.2 812,819 + IAI46_03720 0.81 +0.2 812,881 + IAI46_03720 0.86 +0.2 812,881 + IAI46_03720 0.86 -0.2 812,881 + IAI46_03720 0.86 +0.6 812,882 - IAI46_03720 0.86 +1.5 812,882 - IAI46_03720 0.86 -0.5 813,201 + IAI46_03725 0.18 +0.8 813,201 + IAI46_03725 0.18 -0.4 813,202 - IAI46_03725 0.18 +0.6 813,287 + IAI46_03725 0.32 -0.6 813,288 - IAI46_03725 0.32 -0.3 813,365 - IAI46_03725 0.44 -0.5 813,551 + IAI46_03725 0.74 -0.7 813,552 - IAI46_03725 0.74 +0.6 813,581 - IAI46_03725 0.79 -0.7 813,701 - +0.0 813,703 + +0.3 813,703 + -0.6 813,704 - -0.2 813,704 - -0.6 813,704 - -0.1 813,748 - +0.5 813,756 + +0.6 813,800 + +0.7 813,801 - -0.5 813,818 + +1.5 813,819 - +0.4 813,819 - -0.3 813,859 - IAI46_03730 0.18 +0.5 813,957 + IAI46_03730 0.49 -0.1 813,957 + IAI46_03730 0.49 -0.2 813,958 - IAI46_03730 0.49 +0.2 813,958 - IAI46_03730 0.49 +0.4 814,047 - IAI46_03730 0.77 +0.5 814,268 + IAI46_03735 0.13 +1.6 814,552 + IAI46_03735 0.53 -0.3 814,553 - IAI46_03735 0.53 -0.9 814,636 - IAI46_03735 0.64 +0.7
Or see this region's nucleotide sequence