Experiment: Nickel (II) chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00625 and IAI46_00630 are separated by 1 nucleotides IAI46_00630 and IAI46_00635 overlap by 4 nucleotides
IAI46_00625: IAI46_00625 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 147,515 to 148,645
_00625
IAI46_00630: IAI46_00630 - lipid III flippase WzxE, at 148,647 to 149,897
_00630
IAI46_00635: IAI46_00635 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase, at 149,894 to 150,979
_00635
Position (kb) 148
149
150 Strain fitness (log2 ratio) -2
-1
0
1
2 at 147.963 kb on + strand, within IAI46_00625 at 147.964 kb on - strand, within IAI46_00625 at 147.995 kb on + strand, within IAI46_00625 at 147.995 kb on + strand, within IAI46_00625 at 147.996 kb on - strand, within IAI46_00625 at 147.996 kb on - strand, within IAI46_00625 at 147.996 kb on - strand, within IAI46_00625 at 148.027 kb on + strand, within IAI46_00625 at 148.039 kb on + strand, within IAI46_00625 at 148.184 kb on + strand, within IAI46_00625 at 148.184 kb on + strand, within IAI46_00625 at 148.184 kb on + strand, within IAI46_00625 at 148.184 kb on + strand, within IAI46_00625 at 148.184 kb on + strand, within IAI46_00625 at 148.184 kb on + strand, within IAI46_00625 at 148.185 kb on - strand, within IAI46_00625 at 148.185 kb on - strand, within IAI46_00625 at 148.185 kb on - strand, within IAI46_00625 at 148.185 kb on - strand, within IAI46_00625 at 148.185 kb on - strand, within IAI46_00625 at 148.185 kb on - strand, within IAI46_00625 at 148.185 kb on - strand, within IAI46_00625 at 148.186 kb on + strand, within IAI46_00625 at 148.186 kb on + strand, within IAI46_00625 at 148.186 kb on + strand, within IAI46_00625 at 148.186 kb on + strand, within IAI46_00625 at 148.187 kb on - strand, within IAI46_00625 at 148.187 kb on - strand, within IAI46_00625 at 148.211 kb on + strand, within IAI46_00625 at 148.212 kb on - strand, within IAI46_00625 at 148.239 kb on - strand, within IAI46_00625 at 148.304 kb on + strand, within IAI46_00625 at 148.304 kb on + strand, within IAI46_00625 at 148.304 kb on + strand, within IAI46_00625 at 148.304 kb on + strand, within IAI46_00625 at 148.304 kb on + strand, within IAI46_00625 at 148.305 kb on - strand, within IAI46_00625 at 148.307 kb on + strand, within IAI46_00625 at 148.307 kb on + strand, within IAI46_00625 at 148.308 kb on - strand, within IAI46_00625 at 148.379 kb on - strand, within IAI46_00625 at 148.394 kb on + strand, within IAI46_00625 at 148.395 kb on - strand, within IAI46_00625 at 148.395 kb on - strand, within IAI46_00625 at 148.411 kb on + strand, within IAI46_00625 at 148.583 kb on + strand at 148.583 kb on + strand at 148.583 kb on + strand at 148.584 kb on - strand at 148.588 kb on + strand at 148.588 kb on + strand at 148.589 kb on - strand at 148.589 kb on - strand at 148.609 kb on + strand at 148.610 kb on - strand at 148.610 kb on - strand at 148.610 kb on - strand at 148.621 kb on + strand at 148.622 kb on - strand at 148.630 kb on + strand at 148.630 kb on + strand at 148.630 kb on + strand at 148.631 kb on - strand at 148.646 kb on + strand at 148.646 kb on + strand at 148.646 kb on + strand at 148.787 kb on + strand, within IAI46_00630 at 148.839 kb on + strand, within IAI46_00630 at 148.840 kb on - strand, within IAI46_00630 at 148.840 kb on - strand, within IAI46_00630 at 148.840 kb on - strand, within IAI46_00630 at 148.843 kb on + strand, within IAI46_00630 at 148.844 kb on - strand, within IAI46_00630 at 148.844 kb on - strand, within IAI46_00630 at 148.844 kb on - strand, within IAI46_00630 at 148.852 kb on - strand, within IAI46_00630 at 148.959 kb on - strand, within IAI46_00630 at 148.959 kb on - strand, within IAI46_00630 at 148.959 kb on - strand, within IAI46_00630 at 148.989 kb on + strand, within IAI46_00630 at 148.990 kb on - strand, within IAI46_00630 at 149.018 kb on + strand, within IAI46_00630 at 149.019 kb on - strand, within IAI46_00630 at 149.051 kb on + strand, within IAI46_00630 at 149.052 kb on - strand, within IAI46_00630 at 149.133 kb on + strand, within IAI46_00630 at 149.134 kb on - strand, within IAI46_00630 at 149.134 kb on - strand, within IAI46_00630 at 149.136 kb on + strand, within IAI46_00630 at 149.137 kb on - strand, within IAI46_00630 at 149.350 kb on - strand, within IAI46_00630 at 149.350 kb on - strand, within IAI46_00630 at 149.382 kb on + strand, within IAI46_00630 at 149.470 kb on - strand, within IAI46_00630 at 149.470 kb on - strand, within IAI46_00630 at 149.481 kb on - strand, within IAI46_00630 at 149.557 kb on + strand, within IAI46_00630 at 149.584 kb on + strand, within IAI46_00630 at 149.663 kb on - strand, within IAI46_00630 at 149.672 kb on - strand, within IAI46_00630 at 149.689 kb on - strand, within IAI46_00630 at 149.689 kb on - strand, within IAI46_00630 at 149.689 kb on - strand, within IAI46_00630 at 149.689 kb on - strand, within IAI46_00630 at 149.736 kb on - strand, within IAI46_00630 at 149.827 kb on - strand at 149.827 kb on - strand at 149.862 kb on - strand at 149.880 kb on + strand at 149.893 kb on + strand at 149.893 kb on + strand at 149.893 kb on + strand at 149.913 kb on + strand at 150.011 kb on - strand, within IAI46_00635 at 150.011 kb on - strand, within IAI46_00635 at 150.164 kb on - strand, within IAI46_00635 at 150.164 kb on - strand, within IAI46_00635 at 150.164 kb on - strand, within IAI46_00635 at 150.221 kb on - strand, within IAI46_00635 at 150.221 kb on - strand, within IAI46_00635 at 150.275 kb on + strand, within IAI46_00635 at 150.275 kb on + strand, within IAI46_00635 at 150.276 kb on - strand, within IAI46_00635 at 150.334 kb on + strand, within IAI46_00635 at 150.335 kb on - strand, within IAI46_00635 at 150.337 kb on + strand, within IAI46_00635 at 150.337 kb on + strand, within IAI46_00635 at 150.337 kb on + strand, within IAI46_00635 at 150.338 kb on - strand, within IAI46_00635 at 150.344 kb on + strand, within IAI46_00635 at 150.344 kb on + strand, within IAI46_00635 at 150.344 kb on + strand, within IAI46_00635 at 150.383 kb on + strand, within IAI46_00635 at 150.384 kb on - strand, within IAI46_00635 at 150.427 kb on - strand, within IAI46_00635 at 150.494 kb on - strand, within IAI46_00635 at 150.494 kb on - strand, within IAI46_00635 at 150.581 kb on + strand, within IAI46_00635 at 150.581 kb on + strand, within IAI46_00635 at 150.582 kb on - strand, within IAI46_00635 at 150.582 kb on - strand, within IAI46_00635 at 150.582 kb on - strand, within IAI46_00635 at 150.582 kb on - strand, within IAI46_00635 at 150.583 kb on + strand, within IAI46_00635 at 150.583 kb on + strand, within IAI46_00635 at 150.584 kb on - strand, within IAI46_00635 at 150.584 kb on - strand, within IAI46_00635 at 150.594 kb on + strand, within IAI46_00635 at 150.610 kb on - strand, within IAI46_00635 at 150.676 kb on + strand, within IAI46_00635 at 150.701 kb on + strand, within IAI46_00635 at 150.701 kb on + strand, within IAI46_00635 at 150.713 kb on - strand, within IAI46_00635 at 150.729 kb on + strand, within IAI46_00635 at 150.833 kb on + strand, within IAI46_00635 at 150.834 kb on - strand, within IAI46_00635
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, aerobic remove 147,963 + IAI46_00625 0.40 -0.8 147,964 - IAI46_00625 0.40 +0.2 147,995 + IAI46_00625 0.42 +0.5 147,995 + IAI46_00625 0.42 +1.3 147,996 - IAI46_00625 0.43 +1.5 147,996 - IAI46_00625 0.43 +0.3 147,996 - IAI46_00625 0.43 +1.3 148,027 + IAI46_00625 0.45 +0.3 148,039 + IAI46_00625 0.46 +1.4 148,184 + IAI46_00625 0.59 +1.0 148,184 + IAI46_00625 0.59 +1.4 148,184 + IAI46_00625 0.59 -1.3 148,184 + IAI46_00625 0.59 +0.1 148,184 + IAI46_00625 0.59 +1.1 148,184 + IAI46_00625 0.59 +0.2 148,185 - IAI46_00625 0.59 +1.4 148,185 - IAI46_00625 0.59 +0.2 148,185 - IAI46_00625 0.59 +0.0 148,185 - IAI46_00625 0.59 +0.9 148,185 - IAI46_00625 0.59 +0.6 148,185 - IAI46_00625 0.59 +1.6 148,185 - IAI46_00625 0.59 +0.3 148,186 + IAI46_00625 0.59 +0.7 148,186 + IAI46_00625 0.59 +1.0 148,186 + IAI46_00625 0.59 +0.6 148,186 + IAI46_00625 0.59 +0.9 148,187 - IAI46_00625 0.59 -0.4 148,187 - IAI46_00625 0.59 +1.2 148,211 + IAI46_00625 0.62 -0.1 148,212 - IAI46_00625 0.62 +1.7 148,239 - IAI46_00625 0.64 -0.1 148,304 + IAI46_00625 0.70 +0.9 148,304 + IAI46_00625 0.70 +2.3 148,304 + IAI46_00625 0.70 +0.7 148,304 + IAI46_00625 0.70 +1.9 148,304 + IAI46_00625 0.70 -0.0 148,305 - IAI46_00625 0.70 -0.2 148,307 + IAI46_00625 0.70 +1.3 148,307 + IAI46_00625 0.70 +1.4 148,308 - IAI46_00625 0.70 +1.4 148,379 - IAI46_00625 0.76 +0.1 148,394 + IAI46_00625 0.78 -0.8 148,395 - IAI46_00625 0.78 -0.3 148,395 - IAI46_00625 0.78 -0.6 148,411 + IAI46_00625 0.79 +1.3 148,583 + +1.3 148,583 + +1.6 148,583 + -0.3 148,584 - +1.3 148,588 + +0.4 148,588 + +1.3 148,589 - +0.3 148,589 - +0.6 148,609 + +0.0 148,610 - +0.6 148,610 - +0.1 148,610 - +0.8 148,621 + +2.0 148,622 - +1.1 148,630 + +0.2 148,630 + +0.1 148,630 + +0.5 148,631 - -0.1 148,646 + +1.1 148,646 + -0.5 148,646 + +0.0 148,787 + IAI46_00630 0.11 -1.1 148,839 + IAI46_00630 0.15 -0.1 148,840 - IAI46_00630 0.15 +0.3 148,840 - IAI46_00630 0.15 -0.8 148,840 - IAI46_00630 0.15 +0.6 148,843 + IAI46_00630 0.16 +0.6 148,844 - IAI46_00630 0.16 +2.2 148,844 - IAI46_00630 0.16 +0.8 148,844 - IAI46_00630 0.16 -0.7 148,852 - IAI46_00630 0.16 +0.0 148,959 - IAI46_00630 0.25 +1.2 148,959 - IAI46_00630 0.25 +1.2 148,959 - IAI46_00630 0.25 -0.2 148,989 + IAI46_00630 0.27 +0.8 148,990 - IAI46_00630 0.27 +1.2 149,018 + IAI46_00630 0.30 +0.3 149,019 - IAI46_00630 0.30 +1.7 149,051 + IAI46_00630 0.32 +1.3 149,052 - IAI46_00630 0.32 +2.3 149,133 + IAI46_00630 0.39 +1.0 149,134 - IAI46_00630 0.39 -1.3 149,134 - IAI46_00630 0.39 +0.1 149,136 + IAI46_00630 0.39 -0.4 149,137 - IAI46_00630 0.39 +0.9 149,350 - IAI46_00630 0.56 -0.2 149,350 - IAI46_00630 0.56 -0.4 149,382 + IAI46_00630 0.59 +0.0 149,470 - IAI46_00630 0.66 -0.2 149,470 - IAI46_00630 0.66 +0.5 149,481 - IAI46_00630 0.67 +0.6 149,557 + IAI46_00630 0.73 -1.5 149,584 + IAI46_00630 0.75 +0.0 149,663 - IAI46_00630 0.81 +1.2 149,672 - IAI46_00630 0.82 -0.5 149,689 - IAI46_00630 0.83 +1.6 149,689 - IAI46_00630 0.83 +2.2 149,689 - IAI46_00630 0.83 +0.8 149,689 - IAI46_00630 0.83 +1.0 149,736 - IAI46_00630 0.87 +0.2 149,827 - +1.7 149,827 - +1.0 149,862 - -0.4 149,880 + +0.5 149,893 + -1.8 149,893 + -0.4 149,893 + +0.8 149,913 + +0.4 150,011 - IAI46_00635 0.11 +1.0 150,011 - IAI46_00635 0.11 +1.5 150,164 - IAI46_00635 0.25 -0.1 150,164 - IAI46_00635 0.25 +0.4 150,164 - IAI46_00635 0.25 -0.1 150,221 - IAI46_00635 0.30 +0.4 150,221 - IAI46_00635 0.30 +0.0 150,275 + IAI46_00635 0.35 +0.9 150,275 + IAI46_00635 0.35 +0.3 150,276 - IAI46_00635 0.35 +0.8 150,334 + IAI46_00635 0.41 +1.6 150,335 - IAI46_00635 0.41 +0.4 150,337 + IAI46_00635 0.41 -0.5 150,337 + IAI46_00635 0.41 +0.9 150,337 + IAI46_00635 0.41 -0.3 150,338 - IAI46_00635 0.41 -0.4 150,344 + IAI46_00635 0.41 +0.6 150,344 + IAI46_00635 0.41 +0.8 150,344 + IAI46_00635 0.41 +1.6 150,383 + IAI46_00635 0.45 +0.3 150,384 - IAI46_00635 0.45 +1.6 150,427 - IAI46_00635 0.49 +2.2 150,494 - IAI46_00635 0.55 +0.3 150,494 - IAI46_00635 0.55 +0.6 150,581 + IAI46_00635 0.63 +0.0 150,581 + IAI46_00635 0.63 +1.1 150,582 - IAI46_00635 0.63 +1.2 150,582 - IAI46_00635 0.63 -0.6 150,582 - IAI46_00635 0.63 +0.5 150,582 - IAI46_00635 0.63 +0.8 150,583 + IAI46_00635 0.63 -1.9 150,583 + IAI46_00635 0.63 +0.8 150,584 - IAI46_00635 0.64 +1.4 150,584 - IAI46_00635 0.64 +0.6 150,594 + IAI46_00635 0.64 -0.4 150,610 - IAI46_00635 0.66 +1.6 150,676 + IAI46_00635 0.72 +2.0 150,701 + IAI46_00635 0.74 -1.0 150,701 + IAI46_00635 0.74 +1.3 150,713 - IAI46_00635 0.75 +2.2 150,729 + IAI46_00635 0.77 -0.7 150,833 + IAI46_00635 0.86 +0.2 150,834 - IAI46_00635 0.87 -1.2
Or see this region's nucleotide sequence