Experiment: m.b. Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4252 and Echvi_4253 are separated by 251 nucleotides Echvi_4253 and Echvi_4254 are separated by 33 nucleotides
Echvi_4252: Echvi_4252 - hypothetical protein, at 5,100,405 to 5,100,890
_4252
Echvi_4253: Echvi_4253 - Beta-glucanase/Beta-glucan synthetase, at 5,101,142 to 5,102,023
_4253
Echvi_4254: Echvi_4254 - Beta-xylosidase, at 5,102,057 to 5,103,193
_4254
Position (kb) 5101
5102
5103 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5100.155 kb on + strand at 5100.201 kb on - strand at 5100.333 kb on + strand at 5100.358 kb on + strand at 5100.358 kb on + strand at 5100.376 kb on - strand at 5100.376 kb on - strand at 5100.445 kb on - strand at 5100.533 kb on + strand, within Echvi_4252 at 5100.563 kb on + strand, within Echvi_4252 at 5100.563 kb on + strand, within Echvi_4252 at 5100.563 kb on + strand, within Echvi_4252 at 5100.564 kb on - strand, within Echvi_4252 at 5100.564 kb on - strand, within Echvi_4252 at 5100.628 kb on - strand, within Echvi_4252 at 5100.639 kb on + strand, within Echvi_4252 at 5100.756 kb on - strand, within Echvi_4252 at 5100.766 kb on - strand, within Echvi_4252 at 5100.806 kb on - strand, within Echvi_4252 at 5100.806 kb on - strand, within Echvi_4252 at 5100.806 kb on - strand, within Echvi_4252 at 5100.988 kb on + strand at 5100.989 kb on - strand at 5100.989 kb on - strand at 5101.023 kb on + strand at 5101.023 kb on + strand at 5101.023 kb on + strand at 5101.023 kb on + strand at 5101.024 kb on - strand at 5101.155 kb on + strand at 5101.163 kb on + strand at 5101.163 kb on + strand at 5101.164 kb on - strand at 5101.164 kb on - strand at 5101.167 kb on + strand at 5101.168 kb on - strand at 5101.168 kb on - strand at 5101.168 kb on - strand at 5101.179 kb on + strand at 5101.246 kb on + strand, within Echvi_4253 at 5101.246 kb on + strand, within Echvi_4253 at 5101.246 kb on + strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.249 kb on - strand, within Echvi_4253 at 5101.305 kb on - strand, within Echvi_4253 at 5101.305 kb on - strand, within Echvi_4253 at 5101.342 kb on + strand, within Echvi_4253 at 5101.512 kb on + strand, within Echvi_4253 at 5101.512 kb on + strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.613 kb on + strand, within Echvi_4253 at 5101.614 kb on - strand, within Echvi_4253 at 5101.619 kb on + strand, within Echvi_4253 at 5101.619 kb on + strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.622 kb on + strand, within Echvi_4253 at 5101.622 kb on + strand, within Echvi_4253 at 5101.654 kb on + strand, within Echvi_4253 at 5101.655 kb on - strand, within Echvi_4253 at 5101.675 kb on - strand, within Echvi_4253 at 5101.722 kb on + strand, within Echvi_4253 at 5101.723 kb on - strand, within Echvi_4253 at 5101.777 kb on + strand, within Echvi_4253 at 5101.801 kb on - strand, within Echvi_4253 at 5101.839 kb on + strand, within Echvi_4253 at 5101.949 kb on - strand at 5101.988 kb on + strand at 5101.988 kb on + strand at 5101.989 kb on - strand at 5101.989 kb on - strand at 5101.989 kb on - strand at 5102.029 kb on + strand at 5102.030 kb on - strand at 5102.030 kb on - strand at 5102.032 kb on + strand at 5102.039 kb on - strand at 5102.044 kb on - strand at 5102.044 kb on - strand at 5102.046 kb on + strand at 5102.046 kb on + strand at 5102.046 kb on + strand at 5102.058 kb on + strand at 5102.143 kb on - strand at 5102.191 kb on + strand, within Echvi_4254 at 5102.191 kb on + strand, within Echvi_4254 at 5102.192 kb on - strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.231 kb on - strand, within Echvi_4254 at 5102.248 kb on + strand, within Echvi_4254 at 5102.368 kb on + strand, within Echvi_4254 at 5102.369 kb on - strand, within Echvi_4254 at 5102.370 kb on + strand, within Echvi_4254 at 5102.370 kb on + strand, within Echvi_4254 at 5102.371 kb on - strand, within Echvi_4254 at 5102.371 kb on - strand, within Echvi_4254 at 5102.373 kb on + strand, within Echvi_4254 at 5102.374 kb on - strand, within Echvi_4254 at 5102.517 kb on + strand, within Echvi_4254 at 5102.517 kb on + strand, within Echvi_4254 at 5102.663 kb on - strand, within Echvi_4254 at 5102.699 kb on - strand, within Echvi_4254 at 5102.733 kb on + strand, within Echvi_4254 at 5102.733 kb on + strand, within Echvi_4254 at 5102.733 kb on + strand, within Echvi_4254 at 5102.770 kb on + strand, within Echvi_4254 at 5102.782 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.845 kb on - strand, within Echvi_4254 at 5102.845 kb on - strand, within Echvi_4254 at 5102.943 kb on + strand, within Echvi_4254 at 5102.944 kb on - strand, within Echvi_4254 at 5102.945 kb on + strand, within Echvi_4254 at 5102.945 kb on + strand, within Echvi_4254 at 5102.945 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.011 kb on - strand, within Echvi_4254 at 5103.011 kb on - strand, within Echvi_4254 at 5103.011 kb on - strand, within Echvi_4254
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.2 mM remove 5,100,155 + +0.7 5,100,201 - -0.9 5,100,333 + +1.0 5,100,358 + +1.1 5,100,358 + -0.1 5,100,376 - -0.2 5,100,376 - -0.6 5,100,445 - +0.8 5,100,533 + Echvi_4252 0.26 -1.4 5,100,563 + Echvi_4252 0.33 +0.7 5,100,563 + Echvi_4252 0.33 +0.4 5,100,563 + Echvi_4252 0.33 -0.3 5,100,564 - Echvi_4252 0.33 -0.4 5,100,564 - Echvi_4252 0.33 +0.8 5,100,628 - Echvi_4252 0.46 +0.8 5,100,639 + Echvi_4252 0.48 +0.3 5,100,756 - Echvi_4252 0.72 +0.5 5,100,766 - Echvi_4252 0.74 +0.5 5,100,806 - Echvi_4252 0.83 +0.1 5,100,806 - Echvi_4252 0.83 +0.6 5,100,806 - Echvi_4252 0.83 -0.2 5,100,988 + -0.3 5,100,989 - -0.1 5,100,989 - +0.1 5,101,023 + -0.7 5,101,023 + -1.2 5,101,023 + -0.6 5,101,023 + +0.5 5,101,024 - -1.2 5,101,155 + +1.3 5,101,163 + -0.0 5,101,163 + -0.9 5,101,164 - -0.2 5,101,164 - -1.3 5,101,167 + -0.0 5,101,168 - -0.7 5,101,168 - -0.4 5,101,168 - -0.7 5,101,179 + -1.5 5,101,246 + Echvi_4253 0.12 -2.0 5,101,246 + Echvi_4253 0.12 +0.0 5,101,246 + Echvi_4253 0.12 -1.6 5,101,247 - Echvi_4253 0.12 -1.7 5,101,247 - Echvi_4253 0.12 +1.6 5,101,247 - Echvi_4253 0.12 +0.4 5,101,247 - Echvi_4253 0.12 -0.1 5,101,247 - Echvi_4253 0.12 -0.0 5,101,249 - Echvi_4253 0.12 +0.8 5,101,305 - Echvi_4253 0.18 -0.6 5,101,305 - Echvi_4253 0.18 +1.8 5,101,342 + Echvi_4253 0.23 +0.7 5,101,512 + Echvi_4253 0.42 -0.6 5,101,512 + Echvi_4253 0.42 -0.9 5,101,513 - Echvi_4253 0.42 -0.7 5,101,513 - Echvi_4253 0.42 -0.9 5,101,513 - Echvi_4253 0.42 +0.1 5,101,513 - Echvi_4253 0.42 -0.3 5,101,613 + Echvi_4253 0.53 +0.3 5,101,614 - Echvi_4253 0.54 -0.5 5,101,619 + Echvi_4253 0.54 -0.6 5,101,619 + Echvi_4253 0.54 +0.3 5,101,620 - Echvi_4253 0.54 -0.9 5,101,620 - Echvi_4253 0.54 +0.2 5,101,620 - Echvi_4253 0.54 +0.5 5,101,620 - Echvi_4253 0.54 -2.1 5,101,622 + Echvi_4253 0.54 -1.0 5,101,622 + Echvi_4253 0.54 +0.6 5,101,654 + Echvi_4253 0.58 +0.1 5,101,655 - Echvi_4253 0.58 -0.5 5,101,675 - Echvi_4253 0.60 +0.2 5,101,722 + Echvi_4253 0.66 +0.7 5,101,723 - Echvi_4253 0.66 +0.5 5,101,777 + Echvi_4253 0.72 -0.3 5,101,801 - Echvi_4253 0.75 -0.8 5,101,839 + Echvi_4253 0.79 -0.5 5,101,949 - +0.4 5,101,988 + -0.3 5,101,988 + +0.1 5,101,989 - +0.6 5,101,989 - +0.6 5,101,989 - +1.0 5,102,029 + +0.6 5,102,030 - +0.1 5,102,030 - +0.5 5,102,032 + +0.4 5,102,039 - +1.0 5,102,044 - +0.4 5,102,044 - -0.3 5,102,046 + -1.8 5,102,046 + -0.6 5,102,046 + +0.9 5,102,058 + +0.2 5,102,143 - +0.5 5,102,191 + Echvi_4254 0.12 +0.5 5,102,191 + Echvi_4254 0.12 +0.1 5,102,192 - Echvi_4254 0.12 +0.2 5,102,226 + Echvi_4254 0.15 +0.7 5,102,226 + Echvi_4254 0.15 +0.2 5,102,226 + Echvi_4254 0.15 -0.1 5,102,226 + Echvi_4254 0.15 +0.0 5,102,226 + Echvi_4254 0.15 -0.0 5,102,231 - Echvi_4254 0.15 +0.1 5,102,248 + Echvi_4254 0.17 +0.5 5,102,368 + Echvi_4254 0.27 +0.3 5,102,369 - Echvi_4254 0.27 -0.2 5,102,370 + Echvi_4254 0.28 -2.0 5,102,370 + Echvi_4254 0.28 -0.5 5,102,371 - Echvi_4254 0.28 -0.8 5,102,371 - Echvi_4254 0.28 +1.6 5,102,373 + Echvi_4254 0.28 +0.5 5,102,374 - Echvi_4254 0.28 +0.4 5,102,517 + Echvi_4254 0.40 +0.4 5,102,517 + Echvi_4254 0.40 -0.2 5,102,663 - Echvi_4254 0.53 -0.2 5,102,699 - Echvi_4254 0.56 -2.0 5,102,733 + Echvi_4254 0.59 -1.2 5,102,733 + Echvi_4254 0.59 +1.0 5,102,733 + Echvi_4254 0.59 -0.2 5,102,770 + Echvi_4254 0.63 -0.1 5,102,782 + Echvi_4254 0.64 -0.5 5,102,844 + Echvi_4254 0.69 +0.1 5,102,844 + Echvi_4254 0.69 -0.6 5,102,844 + Echvi_4254 0.69 +0.3 5,102,844 + Echvi_4254 0.69 +0.5 5,102,844 + Echvi_4254 0.69 +0.2 5,102,845 - Echvi_4254 0.69 +0.1 5,102,845 - Echvi_4254 0.69 -0.8 5,102,943 + Echvi_4254 0.78 -0.9 5,102,944 - Echvi_4254 0.78 -0.3 5,102,945 + Echvi_4254 0.78 -0.7 5,102,945 + Echvi_4254 0.78 +0.7 5,102,945 + Echvi_4254 0.78 -2.1 5,103,010 + Echvi_4254 0.84 -1.2 5,103,010 + Echvi_4254 0.84 +0.0 5,103,010 + Echvi_4254 0.84 +0.0 5,103,010 + Echvi_4254 0.84 -0.4 5,103,010 + Echvi_4254 0.84 -0.1 5,103,010 + Echvi_4254 0.84 -1.5 5,103,010 + Echvi_4254 0.84 -0.2 5,103,011 - Echvi_4254 0.84 -0.9 5,103,011 - Echvi_4254 0.84 -0.4 5,103,011 - Echvi_4254 0.84 +0.2
Or see this region's nucleotide sequence